RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 CCDC27Q2M243 656 aa10.52□□□□□ -0.73
SNORA40.4-201ENST00000390971 FBF1Q8TES7 1133 aa10.52□□□□□ -0.73
SNORA40.4-201ENST00000390971 CD68P34810 354 aaPredicted RBP10.51□□□□□ -0.73
SNORA40.4-201ENST00000390971 GRIA4P48058 902 aa10.51□□□□□ -0.73
SNORA40.4-201ENST00000390971 SPRED3Q2MJR0 410 aa10.51□□□□□ -0.73
SNORA40.4-201ENST00000390971 GALNT11Q8NCW6 608 aa10.51□□□□□ -0.73
SNORA40.4-201ENST00000390971 SOX1O00570 391 aaPredicted RBP10.5□□□□□ -0.73
SNORA40.4-201ENST00000390971 EIF4EBP3O60516 100 aaPredicted RBP10.5□□□□□ -0.73
SNORA40.4-201ENST00000390971 GATA4P43694 442 aa10.5□□□□□ -0.73
SNORA40.4-201ENST00000390971 ADGRE1Q14246 886 aa10.5□□□□□ -0.73
SNORA40.4-201ENST00000390971 SUZ12Q15022 739 aaKnown RBP10.5□□□□□ -0.73
SNORA40.4-201ENST00000390971 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.5□□□□□ -0.73
SNORA40.4-201ENST00000390971 PRPF40BQ6NWY9 871 aaKnown RBP10.5□□□□□ -0.73
SNORA40.4-201ENST00000390971 KLHDC7BQ96G42 594 aa10.5□□□□□ -0.73
SNORA40.4-201ENST00000390971 SPOCK3Q9BQ16 436 aa10.5□□□□□ -0.73
SNORA40.4-201ENST00000390971 CARD10Q9BWT7 1032 aa10.5□□□□□ -0.73
SNORA40.4-201ENST00000390971 MRPL18Q9H0U6 180 aaKnown RBP10.5□□□□□ -0.73
SNORA40.4-201ENST00000390971 P4HBP07237 508 aaKnown RBP10.49□□□□□ -0.73
SNORA40.4-201ENST00000390971 C19orf57Q0VDD7 668 aa10.49□□□□□ -0.73
SNORA40.4-201ENST00000390971 GRM2Q14416 872 aa10.49□□□□□ -0.73
SNORA40.4-201ENST00000390971 TMEM130Q8N3G9 435 aa10.49□□□□□ -0.73
SNORA40.4-201ENST00000390971 SLC7A3Q8WY07 619 aa10.49□□□□□ -0.73
SNORA40.4-201ENST00000390971 TMEM238LA0A1B0GVL6 79 aa10.48□□□□□ -0.73
SNORA40.4-201ENST00000390971 ESRRAP11474 423 aaPredicted RBP10.48□□□□□ -0.73
SNORA40.4-201ENST00000390971 FGD1P98174 961 aa10.48□□□□□ -0.73
SNORA40.4-201ENST00000390971 PTPN12Q05209 780 aaKnown RBP10.48□□□□□ -0.73
SNORA40.4-201ENST00000390971 MBTPS1Q14703 1052 aa10.48□□□□□ -0.73
SNORA40.4-201ENST00000390971 DNAJC14Q6Y2X3 702 aaPredicted RBP10.48□□□□□ -0.73
SNORA40.4-201ENST00000390971 CLEC4MQ9H2X3 399 aaPredicted RBP10.48□□□□□ -0.73
SNORA40.4-201ENST00000390971 SOX17Q9H6I2 414 aaPredicted RBP10.48□□□□□ -0.73
SNORA40.4-201ENST00000390971 ZFYVE1Q9HBF4 777 aa10.48□□□□□ -0.73
SNORA40.4-201ENST00000390971 TM4SF5O14894 197 aa10.47□□□□□ -0.73
SNORA40.4-201ENST00000390971 LDHBP07195 334 aaKnown RBP10.47□□□□□ -0.73
SNORA40.4-201ENST00000390971 ERCC3P19447 782 aa10.47□□□□□ -0.73
SNORA40.4-201ENST00000390971 ITPKAP23677 461 aa10.47□□□□□ -0.73
SNORA40.4-201ENST00000390971 PCDH1Q08174 1060 aa10.47□□□□□ -0.73
SNORA40.4-201ENST00000390971 PI16Q6UXB8 463 aa10.47□□□□□ -0.73
SNORA40.4-201ENST00000390971 BCO2Q9BYV7 579 aa10.47□□□□□ -0.73
SNORA40.4-201ENST00000390971 WWC3Q9ULE0 1092 aa10.47□□□□□ -0.73
SNORA40.4-201ENST00000390971 GIPC1O14908 333 aa10.46□□□□□ -0.73
SNORA40.4-201ENST00000390971 PROCP04070 461 aa10.46□□□□□ -0.73
SNORA40.4-201ENST00000390971 FOXD4L6Q3SYB3 417 aaPredicted RBP10.46□□□□□ -0.73
SNORA40.4-201ENST00000390971 EAPPQ56P03 285 aaPredicted RBP10.46□□□□□ -0.73
SNORA40.4-201ENST00000390971 FOXD4L3Q6VB84 417 aaPredicted RBP10.46□□□□□ -0.73
SNORA40.4-201ENST00000390971 TXNRD3Q86VQ6 643 aa10.46□□□□□ -0.73
SNORA40.4-201ENST00000390971 GLIS3Q8NEA6 775 aa10.46□□□□□ -0.73
SNORA40.4-201ENST00000390971 WFDC12Q8WWY7 111 aa10.46□□□□□ -0.73
SNORA40.4-201ENST00000390971 ABCB6Q9NP58 842 aa10.46□□□□□ -0.73
SNORA40.4-201ENST00000390971 KCNK4Q9NYG8 393 aa10.46□□□□□ -0.73
SNORA40.4-201ENST00000390971 DUOXA2Q1HG44 320 aa10.45□□□□□ -0.74
SNORA40.4-201ENST00000390971 RPS26P11Q5JNZ5 115 aaPredicted RBP10.45□□□□□ -0.74
SNORA40.4-201ENST00000390971 SETDB2Q96T68 719 aa10.45□□□□□ -0.74
SNORA40.4-201ENST00000390971 AKTIPQ9H8T0 292 aa10.45□□□□□ -0.74
SNORA40.4-201ENST00000390971 DDX3YO15523 660 aaKnown RBP10.44□□□□□ -0.74
SNORA40.4-201ENST00000390971 XRCC5P13010 732 aaKnown RBP10.44□□□□□ -0.74
SNORA40.4-201ENST00000390971 IREB2P48200 963 aaKnown RBP10.44□□□□□ -0.74
SNORA40.4-201ENST00000390971 ZNF423Q2M1K9 1284 aa10.44□□□□□ -0.74
SNORA40.4-201ENST00000390971 HGSNATQ68CP4 663 aa10.44□□□□□ -0.74
SNORA40.4-201ENST00000390971 NXPE4Q6UWF7 544 aa10.44□□□□□ -0.74
SNORA40.4-201ENST00000390971 DDX54Q8TDD1 881 aaKnown RBP10.44□□□□□ -0.74
SNORA40.4-201ENST00000390971 FRMD6Q96NE9 622 aa10.44□□□□□ -0.74
SNORA40.4-201ENST00000390971 ZNF576Q9H609 170 aa10.44□□□□□ -0.74
SNORA40.4-201ENST00000390971 SPG7Q9UQ90 795 aa10.44□□□□□ -0.74
SNORA40.4-201ENST00000390971 F8W735 103 aaPredicted RBP10.43□□□□□ -0.74
SNORA40.4-201ENST00000390971 FCGRTP55899 365 aa10.43□□□□□ -0.74
SNORA40.4-201ENST00000390971 DTHD1Q6ZMT9 781 aa10.43□□□□□ -0.74
SNORA40.4-201ENST00000390971 NPAS4Q8IUM7 802 aa10.43□□□□□ -0.74
SNORA40.4-201ENST00000390971 SRCIN1Q9C0H9 1055 aa10.43□□□□□ -0.74
SNORA40.4-201ENST00000390971 ADAM11O75078 769 aa10.42□□□□□ -0.74
SNORA40.4-201ENST00000390971 PRPF40AO75400 957 aaKnown RBP10.42□□□□□ -0.74
SNORA40.4-201ENST00000390971 NOS3P29474 1203 aa10.42□□□□□ -0.74
SNORA40.4-201ENST00000390971 NLRP12P59046 1061 aa10.42□□□□□ -0.74
SNORA40.4-201ENST00000390971 GSTM4Q03013 218 aa10.42□□□□□ -0.74
SNORA40.4-201ENST00000390971 TMCO4Q5TGY1 634 aa10.42□□□□□ -0.74
SNORA40.4-201ENST00000390971 FOXD4L4Q8WXT5 416 aaPredicted RBP10.42□□□□□ -0.74
SNORA40.4-201ENST00000390971 B3GALT4O96024 378 aa10.41□□□□□ -0.74
SNORA40.4-201ENST00000390971 ACAD11Q709F0 780 aa10.41□□□□□ -0.74
SNORA40.4-201ENST00000390971 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.41□□□□□ -0.74
SNORA40.4-201ENST00000390971 ALX3O95076 343 aa10.4□□□□□ -0.74
SNORA40.4-201ENST00000390971 WISP1O95388 367 aa10.39□□□□□ -0.75
SNORA40.4-201ENST00000390971 GSTT1P30711 240 aa10.39□□□□□ -0.75
SNORA40.4-201ENST00000390971 KIAA1211Q6ZU35 1233 aa10.39□□□□□ -0.75
SNORA40.4-201ENST00000390971 UBASH3BQ8TF42 649 aa10.39□□□□□ -0.75
SNORA40.4-201ENST00000390971 OSBPL7Q9BZF2 842 aa10.39□□□□□ -0.75
SNORA40.4-201ENST00000390971 CYP11A1P05108 521 aa10.38□□□□□ -0.75
SNORA40.4-201ENST00000390971 GNA15P30679 374 aa10.38□□□□□ -0.75
SNORA40.4-201ENST00000390971 DOC2BQ14184 412 aa10.38□□□□□ -0.75
SNORA40.4-201ENST00000390971 AKAP2Q9Y2D5 859 aa10.38□□□□□ -0.75
SNORA40.4-201ENST00000390971 AGGF1Q8N302 714 aaeCLIP10.37□□□□□ -0.75
SNORA40.4-201ENST00000390971 DUSP9Q99956 384 aaKnown RBP10.37□□□□□ -0.75
SNORA40.4-201ENST00000390971 USP26Q9BXU7 913 aa10.37□□□□□ -0.75
SNORA40.4-201ENST00000390971 CEP41Q9BYV8 373 aa10.37□□□□□ -0.75
SNORA40.4-201ENST00000390971 C12orf49Q9H741 205 aa10.37□□□□□ -0.75
SNORA40.4-201ENST00000390971 TPSG1Q9NRR2 321 aa10.37□□□□□ -0.75
SNORA40.4-201ENST00000390971 MEGF11A6BM72 1044 aa10.36□□□□□ -0.75
SNORA40.4-201ENST00000390971 PPP2R3AQ06190 1150 aa10.36□□□□□ -0.75
SNORA40.4-201ENST00000390971 Q6ZS46 218 aa10.36□□□□□ -0.75
SNORA40.4-201ENST00000390971 DZIP1LQ8IYY4 767 aaKnown RBP10.36□□□□□ -0.75
SNORA40.4-201ENST00000390971 RUSC1Q9BVN2 902 aa10.36□□□□□ -0.75
SNORA40.4-201ENST00000390971 SSBP4Q9BWG4 385 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms