RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 OPTNQ96CV9 577 aa12.44□□□□□ -0.42
IFT88-203ENST00000389373 ZFYVE28Q9HCC9 887 aa12.44□□□□□ -0.42
IFT88-203ENST00000389373 MBIPQ9NS73 344 aa12.44□□□□□ -0.42
IFT88-203ENST00000389373 PPP2R3BQ9Y5P8 575 aa12.44□□□□□ -0.42
IFT88-203ENST00000389373 MPHOSPH8Q99549 860 aa12.43□□□□□ -0.42
IFT88-203ENST00000389373 ANKRD2Q9GZV1 360 aa12.43□□□□□ -0.42
IFT88-203ENST00000389373 CD209Q9NNX6 404 aa12.43□□□□□ -0.42
IFT88-203ENST00000389373 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
IFT88-203ENST00000389373 MAP3K2Q9Y2U5 619 aa12.43□□□□□ -0.42
IFT88-203ENST00000389373 SSC5DA1L4H1 1573 aa12.43□□□□□ -0.42
IFT88-203ENST00000389373 COL1A1P02452 1464 aaPredicted RBP12.42□□□□□ -0.42
IFT88-203ENST00000389373 TESPA1A2RU30 521 aaPredicted RBP12.42□□□□□ -0.42
IFT88-203ENST00000389373 UNCXA6NJT0 531 aa12.42□□□□□ -0.42
IFT88-203ENST00000389373 RASA3Q14644 834 aa12.42□□□□□ -0.42
IFT88-203ENST00000389373 KIF22Q14807 665 aa12.42□□□□□ -0.42
IFT88-203ENST00000389373 CERS5Q8N5B7 392 aa12.42□□□□□ -0.42
IFT88-203ENST00000389373 RUNDC1Q96C34 613 aa12.42□□□□□ -0.42
IFT88-203ENST00000389373 PRMT6Q96LA8 375 aaPredicted RBP12.42□□□□□ -0.42
IFT88-203ENST00000389373 JAG2Q9Y219 1238 aa12.42□□□□□ -0.42
IFT88-203ENST00000389373 CCL15-CCL14A0A0B4J2E2 113 aa12.41□□□□□ -0.42
IFT88-203ENST00000389373 SNAP23O00161 211 aa12.41□□□□□ -0.42
IFT88-203ENST00000389373 CCL15Q16663 113 aa12.41□□□□□ -0.42
IFT88-203ENST00000389373 MTMR14Q8NCE2 650 aa12.41□□□□□ -0.42
IFT88-203ENST00000389373 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
IFT88-203ENST00000389373 BRI3BPQ8WY22 251 aa12.41□□□□□ -0.42
IFT88-203ENST00000389373 RBBP6Q7Z6E9 1792 aaKnown RBP12.41□□□□□ -0.42
IFT88-203ENST00000389373 AOX1Q06278 1338 aa12.4□□□□□ -0.42
IFT88-203ENST00000389373 MKI67P46013 3256 aaKnown RBP12.4□□□□□ -0.42
IFT88-203ENST00000389373 SPDYE2BA6NHP3 402 aa12.4□□□□□ -0.42
IFT88-203ENST00000389373 WDHD1O75717 1129 aaPredicted RBP12.4□□□□□ -0.42
IFT88-203ENST00000389373 IGKV5-2P06315 115 aa12.4□□□□□ -0.42
IFT88-203ENST00000389373 SPDYE6P0CI01 402 aa12.4□□□□□ -0.42
IFT88-203ENST00000389373 ITGA6P23229 1130 aa12.4□□□□□ -0.42
IFT88-203ENST00000389373 GTF2A2P52657 109 aa12.4□□□□□ -0.42
IFT88-203ENST00000389373 CHRNDQ07001 517 aa12.4□□□□□ -0.42
IFT88-203ENST00000389373 NEXNQ0ZGT2 675 aa12.4□□□□□ -0.42
IFT88-203ENST00000389373 WDR43Q15061 677 aaKnown RBP eCLIP12.4□□□□□ -0.42
IFT88-203ENST00000389373 CWF19L2Q2TBE0 894 aaKnown RBP12.4□□□□□ -0.42
IFT88-203ENST00000389373 UBE3BQ7Z3V4 1068 aa12.4□□□□□ -0.42
IFT88-203ENST00000389373 FAM43AQ8N2R8 423 aa12.4□□□□□ -0.42
IFT88-203ENST00000389373 HELBQ8NG08 1087 aaPredicted RBP12.4□□□□□ -0.42
IFT88-203ENST00000389373 MS4A4AQ96JQ5 239 aa12.4□□□□□ -0.42
IFT88-203ENST00000389373 ARHGAP39Q9C0H5 1083 aa12.4□□□□□ -0.42
IFT88-203ENST00000389373 KIAA0100Q14667 2235 aaKnown RBP12.39□□□□□ -0.43
IFT88-203ENST00000389373 PI4KAP2A4QPH2 592 aa12.39□□□□□ -0.43
IFT88-203ENST00000389373 TAF5LO75529 589 aa12.39□□□□□ -0.43
IFT88-203ENST00000389373 MTFR1Q15390 333 aa12.39□□□□□ -0.43
IFT88-203ENST00000389373 CCDC30Q5VVM6 783 aa12.39□□□□□ -0.43
IFT88-203ENST00000389373 PI4KAP1Q8N8J0 262 aa12.39□□□□□ -0.43
IFT88-203ENST00000389373 SPEF2Q9C093 1822 aa12.39□□□□□ -0.43
IFT88-203ENST00000389373 TCP10L2B9ZVM9 353 aa12.38□□□□□ -0.43
IFT88-203ENST00000389373 PLIN1O60240 522 aa12.38□□□□□ -0.43
IFT88-203ENST00000389373 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
IFT88-203ENST00000389373 KSR2Q6VAB6 950 aa12.38□□□□□ -0.43
IFT88-203ENST00000389373 ZNF804AQ7Z570 1209 aa12.38□□□□□ -0.43
IFT88-203ENST00000389373 C8orf58Q8NAV2 365 aa12.38□□□□□ -0.43
IFT88-203ENST00000389373 TDRD3Q9H7E2 651 aaKnown RBP12.38□□□□□ -0.43
IFT88-203ENST00000389373 ZNF70Q9UC06 446 aaPredicted RBP12.38□□□□□ -0.43
IFT88-203ENST00000389373 CSADQ9Y600 493 aa12.38□□□□□ -0.43
IFT88-203ENST00000389373 TNFAIP1Q13829 316 aa12.37□□□□□ -0.43
IFT88-203ENST00000389373 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.37□□□□□ -0.43
IFT88-203ENST00000389373 BIN2Q9UBW5 565 aaPredicted RBP12.37□□□□□ -0.43
IFT88-203ENST00000389373 ZNF646O15015 1829 aaPredicted RBP12.37□□□□□ -0.43
IFT88-203ENST00000389373 ANKRD18BA2A2Z9 1011 aa12.36□□□□□ -0.43
IFT88-203ENST00000389373 NEURL1BA8MQ27 555 aa12.36□□□□□ -0.43
IFT88-203ENST00000389373 H7C1W4 665 aa12.36□□□□□ -0.43
IFT88-203ENST00000389373 TLR2O60603 784 aa12.36□□□□□ -0.43
IFT88-203ENST00000389373 GNAI1P63096 354 aa12.36□□□□□ -0.43
IFT88-203ENST00000389373 LACTBP83111 547 aaPredicted RBP12.36□□□□□ -0.43
IFT88-203ENST00000389373 VGLL4Q14135 290 aa12.36□□□□□ -0.43
IFT88-203ENST00000389373 RALBP1Q15311 655 aa12.36□□□□□ -0.43
IFT88-203ENST00000389373 CDAN1Q8IWY9 1227 aa12.36□□□□□ -0.43
IFT88-203ENST00000389373 SHISA4Q96DD7 197 aa12.36□□□□□ -0.43
IFT88-203ENST00000389373 HTATIP2Q9BUP3 242 aa12.36□□□□□ -0.43
IFT88-203ENST00000389373 ADAMTS8Q9UP79 889 aa12.36□□□□□ -0.43
IFT88-203ENST00000389373 CHMP3Q9Y3E7 222 aa12.36□□□□□ -0.43
IFT88-203ENST00000389373 HTTP42858 3142 aa12.35□□□□□ -0.43
IFT88-203ENST00000389373 ZNF853P0CG23 659 aa12.35□□□□□ -0.43
IFT88-203ENST00000389373 RAET1EQ8TD07 263 aa12.35□□□□□ -0.43
IFT88-203ENST00000389373 TMEM39BQ9GZU3 492 aa12.35□□□□□ -0.43
IFT88-203ENST00000389373 IFT57Q9NWB7 429 aa12.35□□□□□ -0.43
IFT88-203ENST00000389373 TTF2Q9UNY4 1162 aaKnown RBP12.35□□□□□ -0.43
IFT88-203ENST00000389373 NR2E3Q9Y5X4 410 aa12.35□□□□□ -0.43
IFT88-203ENST00000389373 BTBD19C9JJ37 291 aa12.34□□□□□ -0.43
IFT88-203ENST00000389373 FMNL1O95466 1100 aaPredicted RBP12.34□□□□□ -0.43
IFT88-203ENST00000389373 CETPP11597 493 aa12.34□□□□□ -0.43
IFT88-203ENST00000389373 IL1R1P14778 569 aa12.34□□□□□ -0.43
IFT88-203ENST00000389373 PSMC4P43686 418 aa12.34□□□□□ -0.43
IFT88-203ENST00000389373 TNNI2P48788 182 aa12.34□□□□□ -0.43
IFT88-203ENST00000389373 FKBP1AP62942 108 aaKnown RBP12.34□□□□□ -0.43
IFT88-203ENST00000389373 SPDYE2Q495Y8 402 aa12.34□□□□□ -0.43
IFT88-203ENST00000389373 TSPYL6Q8N831 410 aa12.34□□□□□ -0.43
IFT88-203ENST00000389373 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
IFT88-203ENST00000389373 STK31Q9BXU1 1019 aa12.34□□□□□ -0.43
IFT88-203ENST00000389373 CHMP4AQ9BY43 222 aa12.34□□□□□ -0.43
IFT88-203ENST00000389373 RNF208Q9H0X6 261 aa12.34□□□□□ -0.43
IFT88-203ENST00000389373 CPA4Q9UI42 421 aa12.34□□□□□ -0.43
IFT88-203ENST00000389373 GNRH1P01148 92 aa12.33□□□□□ -0.44
IFT88-203ENST00000389373 CSF1RP07333 972 aa12.33□□□□□ -0.44
IFT88-203ENST00000389373 CCL5P13501 91 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms