RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 CACNA1FO60840 1977 aa27.4■■□□□ 1.98
CNEP1R1-201ENST00000389134 APAF1O14727 1248 aa27.4■■□□□ 1.98
CNEP1R1-201ENST00000389134 MYO1BO43795 1136 aa27.4■■□□□ 1.98
CNEP1R1-201ENST00000389134 CWF19L2Q2TBE0 894 aaKnown RBP27.4■■□□□ 1.98
CNEP1R1-201ENST00000389134 PLA2G12BQ9BX93 195 aa27.4■■□□□ 1.98
CNEP1R1-201ENST00000389134 ARMC5Q96C12 935 aa27.39■■□□□ 1.98
CNEP1R1-201ENST00000389134 SSC5DA1L4H1 1573 aa27.39■■□□□ 1.97
CNEP1R1-201ENST00000389134 IREB2P48200 963 aaKnown RBP27.38■■□□□ 1.97
CNEP1R1-201ENST00000389134 CD99L2Q8TCZ2 262 aa27.38■■□□□ 1.97
CNEP1R1-201ENST00000389134 STK31Q9BXU1 1019 aa27.38■■□□□ 1.97
CNEP1R1-201ENST00000389134 EFCC1Q9HA90 598 aa27.38■■□□□ 1.97
CNEP1R1-201ENST00000389134 CHRNDQ07001 517 aa27.37■■□□□ 1.97
CNEP1R1-201ENST00000389134 CRHR2Q13324 411 aa27.37■■□□□ 1.97
CNEP1R1-201ENST00000389134 TSPYL6Q8N831 410 aa27.37■■□□□ 1.97
CNEP1R1-201ENST00000389134 CERS5Q8N5B7 392 aa27.36■■□□□ 1.97
CNEP1R1-201ENST00000389134 CSF1RP07333 972 aa27.35■■□□□ 1.97
CNEP1R1-201ENST00000389134 SP3Q02447 781 aa27.35■■□□□ 1.97
CNEP1R1-201ENST00000389134 CFAP100Q494V2 611 aa27.35■■□□□ 1.97
CNEP1R1-201ENST00000389134 C15orf52Q6ZUT6 534 aaKnown RBP27.35■■□□□ 1.97
CNEP1R1-201ENST00000389134 TESPA1A2RU30 521 aaPredicted RBP27.34■■□□□ 1.97
CNEP1R1-201ENST00000389134 SPDYE2BA6NHP3 402 aa27.34■■□□□ 1.97
CNEP1R1-201ENST00000389134 SPDYE6P0CI01 402 aa27.34■■□□□ 1.97
CNEP1R1-201ENST00000389134 EN2P19622 333 aaPredicted RBP27.34■■□□□ 1.97
CNEP1R1-201ENST00000389134 FKBP1AP62942 108 aaKnown RBP27.34■■□□□ 1.97
CNEP1R1-201ENST00000389134 DDX10Q13206 875 aaKnown RBP27.34■■□□□ 1.97
CNEP1R1-201ENST00000389134 ANKRD13AQ8IZ07 590 aa27.34■■□□□ 1.97
CNEP1R1-201ENST00000389134 A0A1B0GUL6 1792 aa27.34■■□□□ 1.97
CNEP1R1-201ENST00000389134 CLRN2A0PK11 232 aa27.33■■□□□ 1.97
CNEP1R1-201ENST00000389134 USP2O75604 605 aaPredicted RBP27.33■■□□□ 1.97
CNEP1R1-201ENST00000389134 GCKRQ14397 625 aa27.33■■□□□ 1.97
CNEP1R1-201ENST00000389134 NBPF12Q5TAG4 269 aaPredicted RBP27.33■■□□□ 1.97
CNEP1R1-201ENST00000389134 PRMT6Q96LA8 375 aaPredicted RBP27.33■■□□□ 1.97
CNEP1R1-201ENST00000389134 TMEM106CQ9BVX2 250 aa27.33■■□□□ 1.97
CNEP1R1-201ENST00000389134 VEZTQ9HBM0 779 aa27.33■■□□□ 1.97
CNEP1R1-201ENST00000389134 PCDHAC2Q9Y5I4 1007 aa27.33■■□□□ 1.97
CNEP1R1-201ENST00000389134 OTOFQ9HC10 1997 aa27.33■■□□□ 1.97
CNEP1R1-201ENST00000389134 IL1R1P14778 569 aa27.32■■□□□ 1.96
CNEP1R1-201ENST00000389134 GJA5P36382 358 aa27.32■■□□□ 1.96
CNEP1R1-201ENST00000389134 TRIOBPQ9H2D6 2365 aa27.32■■□□□ 1.96
CNEP1R1-201ENST00000389134 IRS2Q9Y4H2 1338 aa27.32■■□□□ 1.96
CNEP1R1-201ENST00000389134 ANKRD18BA2A2Z9 1011 aa27.31■■□□□ 1.96
CNEP1R1-201ENST00000389134 F8W031 263 aaPredicted RBP27.31■■□□□ 1.96
CNEP1R1-201ENST00000389134 CASP7P55210 303 aa27.31■■□□□ 1.96
CNEP1R1-201ENST00000389134 ARHGEF6Q15052 776 aa27.31■■□□□ 1.96
CNEP1R1-201ENST00000389134 ZNF804AQ7Z570 1209 aa27.31■■□□□ 1.96
CNEP1R1-201ENST00000389134 PTPN18Q99952 460 aa27.31■■□□□ 1.96
CNEP1R1-201ENST00000389134 MYH16Q9H6N6 1097 aa27.31■■□□□ 1.96
CNEP1R1-201ENST00000389134 FXR1P51114 621 aaKnown RBP eCLIP27.29■■□□□ 1.96
CNEP1R1-201ENST00000389134 RASA3Q14644 834 aa27.29■■□□□ 1.96
CNEP1R1-201ENST00000389134 G2E3Q7L622 706 aa27.29■■□□□ 1.96
CNEP1R1-201ENST00000389134 SNAP23O00161 211 aa27.28■■□□□ 1.96
CNEP1R1-201ENST00000389134 TAF5LO75529 589 aa27.28■■□□□ 1.96
CNEP1R1-201ENST00000389134 SLC4A2P04920 1241 aa27.28■■□□□ 1.96
CNEP1R1-201ENST00000389134 TNFAIP1Q13829 316 aa27.28■■□□□ 1.96
CNEP1R1-201ENST00000389134 NBPF11Q86T75 865 aa27.28■■□□□ 1.96
CNEP1R1-201ENST00000389134 ZNF333Q96JL9 665 aa27.28■■□□□ 1.96
CNEP1R1-201ENST00000389134 RBM5P52756 815 aaKnown RBP eCLIP27.27■■□□□ 1.96
CNEP1R1-201ENST00000389134 HELBQ8NG08 1087 aaPredicted RBP27.27■■□□□ 1.96
CNEP1R1-201ENST00000389134 OPTNQ96CV9 577 aa27.27■■□□□ 1.96
CNEP1R1-201ENST00000389134 CAP1Q01518 475 aa27.26■■□□□ 1.95
CNEP1R1-201ENST00000389134 MS4A4AQ96JQ5 239 aa27.26■■□□□ 1.95
CNEP1R1-201ENST00000389134 ELP3Q9H9T3 547 aa27.26■■□□□ 1.95
CNEP1R1-201ENST00000389134 AOX1Q06278 1338 aa27.25■■□□□ 1.95
CNEP1R1-201ENST00000389134 IFIT5Q13325 482 aaKnown RBP27.25■■□□□ 1.95
CNEP1R1-201ENST00000389134 TWISTNBQ3B726 338 aaPredicted RBP27.25■■□□□ 1.95
CNEP1R1-201ENST00000389134 SLC9C1Q4G0N8 1177 aa27.25■■□□□ 1.95
CNEP1R1-201ENST00000389134 LINS1Q8NG48 757 aa27.25■■□□□ 1.95
CNEP1R1-201ENST00000389134 TSR2Q969E8 191 aaKnown RBP27.25■■□□□ 1.95
CNEP1R1-201ENST00000389134 DNAAF4Q8WXU2 420 aa27.24■■□□□ 1.95
CNEP1R1-201ENST00000389134 ZFYVE28Q9HCC9 887 aa27.24■■□□□ 1.95
CNEP1R1-201ENST00000389134 FLIIQ13045 1269 aa27.23■■□□□ 1.95
CNEP1R1-201ENST00000389134 TAF1CQ15572 869 aaPredicted RBP27.23■■□□□ 1.95
CNEP1R1-201ENST00000389134 SPDYE2Q495Y8 402 aa27.22■■□□□ 1.95
CNEP1R1-201ENST00000389134 ZNF70Q9UC06 446 aaPredicted RBP27.22■■□□□ 1.95
CNEP1R1-201ENST00000389134 JAG2Q9Y219 1238 aa27.22■■□□□ 1.95
CNEP1R1-201ENST00000389134 PTCH2Q9Y6C5 1203 aa27.22■■□□□ 1.95
CNEP1R1-201ENST00000389134 GTF2A2P52657 109 aa27.21■■□□□ 1.95
CNEP1R1-201ENST00000389134 FKBP5Q13451 457 aaPredicted RBP27.21■■□□□ 1.95
CNEP1R1-201ENST00000389134 SLC4A8Q2Y0W8 1093 aa27.21■■□□□ 1.95
CNEP1R1-201ENST00000389134 BRI3BPQ8WY22 251 aa27.21■■□□□ 1.95
CNEP1R1-201ENST00000389134 PRKRIP1Q9H875 184 aaPredicted RBP27.21■■□□□ 1.95
CNEP1R1-201ENST00000389134 SERPINA10Q9UK55 444 aa27.21■■□□□ 1.95
CNEP1R1-201ENST00000389134 COLQQ9Y215 455 aaPredicted RBP27.21■■□□□ 1.95
CNEP1R1-201ENST00000389134 FAM205AQ6ZU69 1335 aa27.2■■□□□ 1.95
CNEP1R1-201ENST00000389134 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.2■■□□□ 1.94
CNEP1R1-201ENST00000389134 CHMP3Q9Y3E7 222 aa27.2■■□□□ 1.94
CNEP1R1-201ENST00000389134 ARAP2Q8WZ64 1704 aa27.19■■□□□ 1.94
CNEP1R1-201ENST00000389134 CCL15-CCL14A0A0B4J2E2 113 aa27.19■■□□□ 1.94
CNEP1R1-201ENST00000389134 WDHD1O75717 1129 aaPredicted RBP27.19■■□□□ 1.94
CNEP1R1-201ENST00000389134 MAP3K9P80192 1104 aa27.19■■□□□ 1.94
CNEP1R1-201ENST00000389134 FOXO4P98177 505 aa27.19■■□□□ 1.94
CNEP1R1-201ENST00000389134 CCL15Q16663 113 aa27.19■■□□□ 1.94
CNEP1R1-201ENST00000389134 TEPSINQ96N21 525 aa27.19■■□□□ 1.94
CNEP1R1-201ENST00000389134 MFSD14BQ5SR56 506 aa27.18■■□□□ 1.94
CNEP1R1-201ENST00000389134 TDRD3Q9H7E2 651 aaKnown RBP27.18■■□□□ 1.94
CNEP1R1-201ENST00000389134 TTF2Q9UNY4 1162 aaKnown RBP27.18■■□□□ 1.94
CNEP1R1-201ENST00000389134 SZT2Q5T011 3432 aa27.17■■□□□ 1.94
CNEP1R1-201ENST00000389134 TNNI2P48788 182 aa27.17■■□□□ 1.94
CNEP1R1-201ENST00000389134 CSADQ9Y600 493 aa27.17■■□□□ 1.94
CNEP1R1-201ENST00000389134 PLIN1O60240 522 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms