RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 SOGA3Q5TF21 947 aa21.78■■□□□ 1.08
CSPG5-202ENST00000383738 PARP3Q9Y6F1 533 aa21.78■■□□□ 1.08
CSPG5-202ENST00000383738 C1orf167Q5SNV9 1468 aa21.78■■□□□ 1.08
CSPG5-202ENST00000383738 LMAN1P49257 510 aa21.78■■□□□ 1.08
CSPG5-202ENST00000383738 TERF1P54274 439 aa21.78■■□□□ 1.08
CSPG5-202ENST00000383738 NCOA5Q9HCD5 579 aaKnown RBP21.78■■□□□ 1.08
CSPG5-202ENST00000383738 ECM2O94769 699 aaPredicted RBP21.77■■□□□ 1.08
CSPG5-202ENST00000383738 TAF3Q5VWG9 929 aa21.77■■□□□ 1.08
CSPG5-202ENST00000383738 SCAND2PQ9GZW5 306 aaPredicted RBP21.77■■□□□ 1.08
CSPG5-202ENST00000383738 CWC15Q9P013 229 aaKnown RBP21.77■■□□□ 1.08
CSPG5-202ENST00000383738 BCAMP50895 628 aa21.77■■□□□ 1.08
CSPG5-202ENST00000383738 SNW1Q13573 536 aaKnown RBP21.77■■□□□ 1.08
CSPG5-202ENST00000383738 CCDC43Q96MW1 224 aaKnown RBP21.77■■□□□ 1.08
CSPG5-202ENST00000383738 NYXQ9GZU5 481 aa21.77■■□□□ 1.08
CSPG5-202ENST00000383738 DNAI1Q9UI46 699 aa21.77■■□□□ 1.08
CSPG5-202ENST00000383738 CCDC171Q6TFL3 1326 aa21.77■■□□□ 1.08
CSPG5-202ENST00000383738 ANKARQ7Z5J8 1434 aa21.77■■□□□ 1.08
CSPG5-202ENST00000383738 IGKV5-2P06315 115 aa21.77■■□□□ 1.07
CSPG5-202ENST00000383738 SH2B1Q9NRF2 756 aaPredicted RBP21.77■■□□□ 1.07
CSPG5-202ENST00000383738 RNF216Q9NWF9 866 aaPredicted RBP21.77■■□□□ 1.07
CSPG5-202ENST00000383738 ELF2Q15723 593 aa21.76■■□□□ 1.07
CSPG5-202ENST00000383738 AXDND1Q5T1B0 1012 aaPredicted RBP21.76■■□□□ 1.07
CSPG5-202ENST00000383738 A0A0D9SFI3 127 aa21.76■■□□□ 1.07
CSPG5-202ENST00000383738 PRC1O43663 620 aa21.76■■□□□ 1.07
CSPG5-202ENST00000383738 METAP2P50579 478 aaKnown RBP eCLIP21.76■■□□□ 1.07
CSPG5-202ENST00000383738 SEPT12Q8IYM1 358 aa21.76■■□□□ 1.07
CSPG5-202ENST00000383738 SAP30BPQ9UHR5 308 aaKnown RBP21.76■■□□□ 1.07
CSPG5-202ENST00000383738 KIF20AO95235 890 aa21.76■■□□□ 1.07
CSPG5-202ENST00000383738 IARSP41252 1262 aaKnown RBP21.76■■□□□ 1.07
CSPG5-202ENST00000383738 PTH1RQ03431 593 aa21.76■■□□□ 1.07
CSPG5-202ENST00000383738 PNPLA6Q8IY17 1366 aa21.75■■□□□ 1.07
CSPG5-202ENST00000383738 SGSM2O43147 1006 aa21.75■■□□□ 1.07
CSPG5-202ENST00000383738 CDKL5O76039 1030 aa21.75■■□□□ 1.07
CSPG5-202ENST00000383738 OLFM4Q6UX06 510 aa21.75■■□□□ 1.07
CSPG5-202ENST00000383738 NRBP1Q9UHY1 535 aa21.75■■□□□ 1.07
CSPG5-202ENST00000383738 DBNLQ9UJU6 430 aaKnown RBP21.75■■□□□ 1.07
CSPG5-202ENST00000383738 B4E1Z4 1266 aa21.75■■□□□ 1.07
CSPG5-202ENST00000383738 GIGYF2Q6Y7W6 1299 aaKnown RBP21.75■■□□□ 1.07
CSPG5-202ENST00000383738 CPLX3Q8WVH0 158 aa21.75■■□□□ 1.07
CSPG5-202ENST00000383738 ATG3Q9NT62 314 aa21.75■■□□□ 1.07
CSPG5-202ENST00000383738 BAG3O95817 575 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 PARP10Q53GL7 1025 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 MYL10Q9BUA6 226 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 KDM4FA0A1W2PPD8 638 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 CTSWP56202 376 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 DMTNQ08495 405 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 OGFRQ9NZT2 677 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 H0YHG0 523 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 CERS3Q8IU89 383 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 C10orf67Q8IYJ2 551 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 FSIP1Q8NA03 581 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 CFAP45Q9UL16 551 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 KDRP35968 1356 aa21.74■■□□□ 1.07
CSPG5-202ENST00000383738 GPAA1O43292 621 aa21.73■■□□□ 1.07
CSPG5-202ENST00000383738 NOM1Q5C9Z4 860 aaKnown RBP21.73■■□□□ 1.07
CSPG5-202ENST00000383738 A0A087WWV3 80 aa21.73■■□□□ 1.07
CSPG5-202ENST00000383738 MAGEB6P1A0A0J9YX57 407 aa21.73■■□□□ 1.07
CSPG5-202ENST00000383738 HMGB1P09429 215 aaKnown RBP21.73■■□□□ 1.07
CSPG5-202ENST00000383738 RPS8P62241 208 aaKnown RBP21.73■■□□□ 1.07
CSPG5-202ENST00000383738 SYT10Q6XYQ8 523 aa21.73■■□□□ 1.07
CSPG5-202ENST00000383738 GPATCH11Q8N954 259 aa21.73■■□□□ 1.07
CSPG5-202ENST00000383738 MAP3K15Q6ZN16 1313 aa21.73■■□□□ 1.07
CSPG5-202ENST00000383738 BRD1O95696 1058 aa21.73■■□□□ 1.07
CSPG5-202ENST00000383738 ZFYP08048 801 aaPredicted RBP21.73■■□□□ 1.07
CSPG5-202ENST00000383738 PUM3Q15397 648 aaKnown RBP21.73■■□□□ 1.07
CSPG5-202ENST00000383738 OTUD7BQ6GQQ9 843 aa21.73■■□□□ 1.07
CSPG5-202ENST00000383738 ZBTB38Q8NAP3 1195 aaPredicted RBP21.73■■□□□ 1.07
CSPG5-202ENST00000383738 CRNKL1Q9BZJ0 848 aaKnown RBP21.73■■□□□ 1.07
CSPG5-202ENST00000383738 AATFQ9NY61 560 aaKnown RBP eCLIP21.72■■□□□ 1.07
CSPG5-202ENST00000383738 WTAPQ15007 396 aa21.72■■□□□ 1.07
CSPG5-202ENST00000383738 ARHGAP29Q52LW3 1261 aa21.72■■□□□ 1.07
CSPG5-202ENST00000383738 VEZTQ9HBM0 779 aa21.72■■□□□ 1.07
CSPG5-202ENST00000383738 PAXBP1Q9Y5B6 917 aa21.72■■□□□ 1.07
CSPG5-202ENST00000383738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.72■■□□□ 1.07
CSPG5-202ENST00000383738 TPM1P09493 284 aa21.72■■□□□ 1.07
CSPG5-202ENST00000383738 HIBADHP31937 336 aaKnown RBP21.72■■□□□ 1.07
CSPG5-202ENST00000383738 PHKA1P46020 1223 aa21.72■■□□□ 1.07
CSPG5-202ENST00000383738 EIF6P56537 245 aaKnown RBP21.72■■□□□ 1.07
CSPG5-202ENST00000383738 RNF41Q9H4P4 317 aaPredicted RBP21.72■■□□□ 1.07
CSPG5-202ENST00000383738 PHACTR2O75167 634 aa21.71■■□□□ 1.07
CSPG5-202ENST00000383738 MCM6Q14566 821 aa21.71■■□□□ 1.07
CSPG5-202ENST00000383738 CATIPQ7Z7H3 387 aa21.71■■□□□ 1.07
CSPG5-202ENST00000383738 HOOK1Q9UJC3 728 aaKnown RBP21.71■■□□□ 1.07
CSPG5-202ENST00000383738 TRPC5Q9UL62 973 aaPredicted RBP21.71■■□□□ 1.07
CSPG5-202ENST00000383738 SNX14Q9Y5W7 946 aa21.71■■□□□ 1.07
CSPG5-202ENST00000383738 LDHCP07864 332 aa21.71■■□□□ 1.07
CSPG5-202ENST00000383738 AOPEPQ8N6M6 819 aa21.71■■□□□ 1.07
CSPG5-202ENST00000383738 KBTBD3Q8NAB2 608 aa21.71■■□□□ 1.07
CSPG5-202ENST00000383738 CCAR1Q8IX12 1150 aaKnown RBP21.7■■□□□ 1.07
CSPG5-202ENST00000383738 IPO4Q8TEX9 1081 aaKnown RBP21.7■■□□□ 1.07
CSPG5-202ENST00000383738 CDK5RAP3Q96JB5 506 aa21.7■■□□□ 1.07
CSPG5-202ENST00000383738 hCG_1642624A0A1W2PR95 340 aa21.7■■□□□ 1.06
CSPG5-202ENST00000383738 ZBTB43O43298 467 aa21.7■■□□□ 1.06
CSPG5-202ENST00000383738 BMS1Q14692 1282 aaKnown RBP21.7■■□□□ 1.06
CSPG5-202ENST00000383738 HEG1Q9ULI3 1381 aa21.7■■□□□ 1.06
CSPG5-202ENST00000383738 NBPF26B4DH59 902 aa21.7■■□□□ 1.06
CSPG5-202ENST00000383738 TSR1Q2NL82 804 aaKnown RBP21.7■■□□□ 1.06
CSPG5-202ENST00000383738 NBPF14Q5TI25 921 aa21.7■■□□□ 1.06
CSPG5-202ENST00000383738 NBPF10Q6P3W6 841 aaKnown RBP21.7■■□□□ 1.06
CSPG5-202ENST00000383738 NBPF15Q8N660 670 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms