RNA–Protein interactions for RNA: ENST00000381998.8

MSR1-204, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-204ENST00000381998 BABAM1Q9NWV8 329 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.14□□□□□ -1.27
MSR1-204ENST00000381998 ADGRL3Q9HAR2 1447 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 GNAI3P08754 354 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 RPS6KC1Q96S38 1066 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 SRCIN1Q9C0H9 1055 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 USP44Q9H0E7 712 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 RPAP1Q9BWH6 1393 aaPredicted RBP7.14□□□□□ -1.27
MSR1-204ENST00000381998 TUBGCP6Q96RT7 1819 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 DTNBO60941 627 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 HSPA4P34932 840 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 CEMIPQ8WUJ3 1361 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 SCYL1Q96KG9 808 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 ZFRQ96KR1 1074 aaKnown RBP7.14□□□□□ -1.27
MSR1-204ENST00000381998 WWC3Q9ULE0 1092 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 PRR12Q9ULL5 1215 aa7.14□□□□□ -1.27
MSR1-204ENST00000381998 ZNF142P52746 1687 aaPredicted RBP7.13□□□□□ -1.27
MSR1-204ENST00000381998 SOS1Q07889 1333 aaPredicted RBP7.13□□□□□ -1.27
MSR1-204ENST00000381998 WDR33Q9C0J8 1336 aaKnown RBP7.13□□□□□ -1.27
MSR1-204ENST00000381998 BHMG1C9JSJ3 638 aaPredicted RBP7.13□□□□□ -1.27
MSR1-204ENST00000381998 SULF1Q8IWU6 871 aa7.13□□□□□ -1.27
MSR1-204ENST00000381998 SYAP1Q96A49 352 aaPredicted RBP7.13□□□□□ -1.27
MSR1-204ENST00000381998 ZNF830Q96NB3 372 aaPredicted RBP7.13□□□□□ -1.27
MSR1-204ENST00000381998 LGR6Q9HBX8 967 aa7.13□□□□□ -1.27
MSR1-204ENST00000381998 USP25Q9UHP3 1055 aa7.13□□□□□ -1.27
MSR1-204ENST00000381998 FBXO9Q9UK97 447 aaPredicted RBP7.13□□□□□ -1.27
MSR1-204ENST00000381998 G3BP2Q9UN86 482 aaKnown RBP7.13□□□□□ -1.27
MSR1-204ENST00000381998 CNPY2Q9Y2B0 182 aa7.13□□□□□ -1.27
MSR1-204ENST00000381998 COL4A3BPQ9Y5P4 624 aa7.13□□□□□ -1.27
MSR1-204ENST00000381998 CCDC189A1A4V9 331 aa7.13□□□□□ -1.27
MSR1-204ENST00000381998 CLGNO14967 610 aa7.13□□□□□ -1.27
MSR1-204ENST00000381998 ZNF280DQ6N043 979 aa7.13□□□□□ -1.27
MSR1-204ENST00000381998 TSC1Q92574 1164 aa7.13□□□□□ -1.27
MSR1-204ENST00000381998 JARID2Q92833 1246 aaPredicted RBP7.13□□□□□ -1.27
MSR1-204ENST00000381998 ZNF622Q969S3 477 aaKnown RBP eCLIP7.13□□□□□ -1.27
MSR1-204ENST00000381998 LRRC59Q96AG4 307 aaKnown RBP7.13□□□□□ -1.27
MSR1-204ENST00000381998 ORAI2Q96SN7 254 aa7.13□□□□□ -1.27
MSR1-204ENST00000381998 BSDC1Q9NW68 430 aaPredicted RBP7.13□□□□□ -1.27
MSR1-204ENST00000381998 FAM208AQ9UK61 1670 aaKnown RBP7.13□□□□□ -1.27
MSR1-204ENST00000381998 LTN1O94822 1766 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 GCGRP47871 477 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 KIAA2012Q0VF49 1180 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 FAM98CQ17RN3 349 aaKnown RBP7.12□□□□□ -1.27
MSR1-204ENST00000381998 PHLDB3Q6NSJ2 640 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 ADGRD1Q6QNK2 874 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 SASS6Q6UVJ0 657 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 KCNH5Q8NCM2 988 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 PI4K2BQ8TCG2 481 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 PRKAG2Q9UGJ0 569 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 SWAP70Q9UH65 585 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 NPHP4O75161 1426 aaPredicted RBP7.12□□□□□ -1.27
MSR1-204ENST00000381998 RAD50Q92878 1312 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 CFHP08603 1231 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 UBTFL1P0CB47 393 aaPredicted RBP7.12□□□□□ -1.27
MSR1-204ENST00000381998 HCLS1P14317 486 aaPredicted RBP7.12□□□□□ -1.27
MSR1-204ENST00000381998 CPA1P15085 419 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 BCAMP50895 628 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 EIF4A1P60842 406 aaKnown RBP7.12□□□□□ -1.27
MSR1-204ENST00000381998 LSM11P83369 360 aaKnown RBP eCLIP7.12□□□□□ -1.27
MSR1-204ENST00000381998 HDLBPQ00341 1268 aaKnown RBP7.12□□□□□ -1.27
MSR1-204ENST00000381998 C9orf131Q5VYM1 1079 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 C17orf53Q8N3J3 647 aaPredicted RBP7.12□□□□□ -1.27
MSR1-204ENST00000381998 SSH3Q8TE77 659 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 TTC14Q96N46 770 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 PHAXQ9H814 394 aaKnown RBP7.12□□□□□ -1.27
MSR1-204ENST00000381998 TBC1D2BQ9UPU7 963 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 SNX14Q9Y5W7 946 aa7.12□□□□□ -1.27
MSR1-204ENST00000381998 ADAMTSL3P82987 1691 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 AOX1Q06278 1338 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 MED1Q15648 1581 aaPredicted RBP7.11□□□□□ -1.27
MSR1-204ENST00000381998 SOWAHDA6NJG2 315 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 DYNC1I1O14576 645 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 SGSM2O43147 1006 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 KCNQ3O43525 872 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 SURF6O75683 361 aaKnown RBP7.11□□□□□ -1.27
MSR1-204ENST00000381998 LMOD1P29536 600 aaPredicted RBP7.11□□□□□ -1.27
MSR1-204ENST00000381998 AK2P54819 239 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 RUFY3Q7L099 469 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 PPP1R42Q7Z4L9 355 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 TMEM87AQ8NBN3 555 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 TTC12Q9H892 705 aaPredicted RBP7.11□□□□□ -1.27
MSR1-204ENST00000381998 ARHGEF10LQ9HCE6 1279 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.11□□□□□ -1.27
MSR1-204ENST00000381998 PALM3A6NDB9 673 aaPredicted RBP7.11□□□□□ -1.27
MSR1-204ENST00000381998 LARGE1O95461 756 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 GCP02774 474 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 SYT1P21579 422 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 GTF2F1P35269 517 aaKnown RBP eCLIP7.11□□□□□ -1.27
MSR1-204ENST00000381998 EVA1CP58658 441 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 CCDC183Q5T5S1 534 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 FBXO33Q7Z6M2 555 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 ARHGEF25Q86VW2 580 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 LSG1Q9H089 658 aaKnown RBP7.11□□□□□ -1.27
MSR1-204ENST00000381998 HMX1Q9NP08 348 aaPredicted RBP7.11□□□□□ -1.27
MSR1-204ENST00000381998 IQSEC3Q9UPP2 1182 aaPredicted RBP7.11□□□□□ -1.27
MSR1-204ENST00000381998 SPG7Q9UQ90 795 aa7.11□□□□□ -1.27
MSR1-204ENST00000381998 FIBPO43427 364 aa7.1□□□□□ -1.27
MSR1-204ENST00000381998 AP1G2O75843 785 aa7.1□□□□□ -1.27
MSR1-204ENST00000381998 ADCY5O95622 1261 aa7.1□□□□□ -1.27
MSR1-204ENST00000381998 ZSCAN22P10073 491 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms