RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 KCNJ4P48050 445 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 MEX3CQ5U5Q3 659 aaKnown RBP10.48□□□□□ -0.73
GPNMB-202ENST00000381990 LARP1BQ659C4 914 aaKnown RBP10.48□□□□□ -0.73
GPNMB-202ENST00000381990 PRPF40BQ6NWY9 871 aaKnown RBP10.48□□□□□ -0.73
GPNMB-202ENST00000381990 DDX46Q7L014 1031 aaKnown RBP10.48□□□□□ -0.73
GPNMB-202ENST00000381990 ZNF652Q9Y2D9 606 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 NDUFB9Q9Y6M9 179 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 CNTNAP4Q9C0A0 1308 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 BCORQ6W2J9 1755 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 NHSQ6T4R5 1651 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 GOLGA6L4A6NEF3 574 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 SPDYE4A6NLX3 237 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 LARGE1O95461 756 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 METTL24Q5JXM2 366 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 CCDC158Q5M9N0 1113 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 GORABQ5T7V8 394 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 CCDC186Q7Z3E2 898 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 TTC6Q86TZ1 520 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 LINC00116Q8NCU8 138 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 CCDC112Q8NEF3 446 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 CNNM1Q9NRU3 951 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 CTNNA3Q9UI47 895 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 BTAF1O14981 1849 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 GOLIM4O00461 696 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 ZNF75DP51815 510 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 CREB3L3Q68CJ9 461 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 ZSCAN25Q6NSZ9 544 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 CLEC4GQ6UXB4 293 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 ZNF589Q86UQ0 364 aaPredicted RBP10.48□□□□□ -0.73
GPNMB-202ENST00000381990 XAGE2Q96GT9 111 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 GJD4Q96KN9 370 aaPredicted RBP10.48□□□□□ -0.73
GPNMB-202ENST00000381990 ALDH8A1Q9H2A2 487 aaPredicted RBP10.48□□□□□ -0.73
GPNMB-202ENST00000381990 CBX8Q9HC52 389 aa10.48□□□□□ -0.73
GPNMB-202ENST00000381990 NIP7Q9Y221 180 aaKnown RBP eCLIP10.48□□□□□ -0.73
GPNMB-202ENST00000381990 RGL2O15211 777 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 TAF5LO75529 589 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 TNNT1P13805 278 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 ME3Q16798 604 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 RNF20Q5VTR2 975 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 LUZP1Q86V48 1076 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 DRC7Q8IY82 874 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 TRIM5Q9C035 493 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 DDX41Q9UJV9 622 aaKnown RBP10.47□□□□□ -0.73
GPNMB-202ENST00000381990 LRP5O75197 1615 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 ABCC12Q96J65 1359 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 NTSR2O95665 410 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 ADORA1P30542 326 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 HSPA1LP34931 641 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 MCMDC2Q4G0Z9 681 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 ANO6Q4KMQ2 910 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 TTC39AQ5SRH9 613 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 C16orf45Q96MC5 204 aaPredicted RBP10.47□□□□□ -0.73
GPNMB-202ENST00000381990 CLSTN2Q9H4D0 955 aa10.47□□□□□ -0.73
GPNMB-202ENST00000381990 LAMB2P55268 1798 aa10.46□□□□□ -0.73
GPNMB-202ENST00000381990 SLC27A2O14975 620 aa10.46□□□□□ -0.73
GPNMB-202ENST00000381990 FAM193AP78312 1265 aa10.46□□□□□ -0.73
GPNMB-202ENST00000381990 TPRNQ4KMQ1 711 aa10.46□□□□□ -0.73
GPNMB-202ENST00000381990 RC3H1Q5TC82 1133 aaKnown RBP10.46□□□□□ -0.73
GPNMB-202ENST00000381990 USPL1Q5W0Q7 1092 aa10.46□□□□□ -0.73
GPNMB-202ENST00000381990 PTF1AQ7RTS3 328 aa10.46□□□□□ -0.73
GPNMB-202ENST00000381990 VGLL2Q8N8G2 317 aa10.46□□□□□ -0.73
GPNMB-202ENST00000381990 DACT1Q9NYF0 836 aa10.46□□□□□ -0.73
GPNMB-202ENST00000381990 HMG20BQ9P0W2 317 aa10.46□□□□□ -0.73
GPNMB-202ENST00000381990 AFF2P51816 1311 aa10.46□□□□□ -0.73
GPNMB-202ENST00000381990 DDX60Q8IY21 1712 aaKnown RBP10.46□□□□□ -0.74
GPNMB-202ENST00000381990 ADCK5Q3MIX3 580 aa10.46□□□□□ -0.74
GPNMB-202ENST00000381990 SARM1Q6SZW1 724 aa10.46□□□□□ -0.74
GPNMB-202ENST00000381990 PIAS4Q8N2W9 510 aaPredicted RBP10.46□□□□□ -0.74
GPNMB-202ENST00000381990 SPATA32Q96LK8 384 aa10.46□□□□□ -0.74
GPNMB-202ENST00000381990 LARP6Q9BRS8 491 aaKnown RBP10.46□□□□□ -0.74
GPNMB-202ENST00000381990 HELLSQ9NRZ9 838 aa10.46□□□□□ -0.74
GPNMB-202ENST00000381990 MORC2Q9Y6X9 1032 aaPredicted RBP10.46□□□□□ -0.74
GPNMB-202ENST00000381990 RTL9Q8NET4 1388 aa10.46□□□□□ -0.74
GPNMB-202ENST00000381990 PDE8BO95263 885 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 LIG1P18858 919 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 ZNF165P49910 485 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 ST3GAL1Q11201 340 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 LRRFIP1Q32MZ4 808 aaKnown RBP10.45□□□□□ -0.74
GPNMB-202ENST00000381990 CLIP2Q9UDT6 1046 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 MROH5Q6ZUA9 1318 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 ATRNO75882 1429 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 ONECUT3O60422 494 aaPredicted RBP10.45□□□□□ -0.74
GPNMB-202ENST00000381990 CPA1P15085 419 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 TSGA10IPQ3SY00 556 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 CCDC152Q4G0S7 254 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 ZMYM1Q5SVZ6 1142 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 CDC37L1Q7L3B6 337 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 MRFAP1L1Q96HT8 127 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 ZNF512BQ96KM6 892 aaPredicted RBP10.45□□□□□ -0.74
GPNMB-202ENST00000381990 TPCN1Q9ULQ1 816 aa10.45□□□□□ -0.74
GPNMB-202ENST00000381990 U3KPZ7 1027 aaPredicted RBP10.45□□□□□ -0.74
GPNMB-202ENST00000381990 RPS6KA4O75676 772 aa10.44□□□□□ -0.74
GPNMB-202ENST00000381990 KCNQ4P56696 695 aa10.44□□□□□ -0.74
GPNMB-202ENST00000381990 RBM6P78332 1123 aaKnown RBP10.44□□□□□ -0.74
GPNMB-202ENST00000381990 CAMK4Q16566 473 aa10.44□□□□□ -0.74
GPNMB-202ENST00000381990 TPD52L1Q16890 204 aaPredicted RBP10.44□□□□□ -0.74
GPNMB-202ENST00000381990 CREBRFQ8IUR6 639 aa10.44□□□□□ -0.74
GPNMB-202ENST00000381990 SEC62Q99442 399 aaKnown RBP10.44□□□□□ -0.74
GPNMB-202ENST00000381990 TRPC5Q9UL62 973 aaPredicted RBP10.44□□□□□ -0.74
GPNMB-202ENST00000381990 SCN7AQ01118 1682 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms