RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 AGBL3Q8NEM8 1001 aa19.96■□□□□ 0.79
SNRPB-201ENST00000381342 ABT1Q9ULW3 272 aaKnown RBP19.96■□□□□ 0.79
SNRPB-201ENST00000381342 A0A1B0GUL7 405 aa19.95■□□□□ 0.78
SNRPB-201ENST00000381342 IL1R1P14778 569 aa19.95■□□□□ 0.78
SNRPB-201ENST00000381342 BCAMP50895 628 aa19.95■□□□□ 0.78
SNRPB-201ENST00000381342 TIMM10P62072 90 aa19.95■□□□□ 0.78
SNRPB-201ENST00000381342 CAVIN4Q5BKX8 364 aa19.95■□□□□ 0.78
SNRPB-201ENST00000381342 CDC37L1Q7L3B6 337 aa19.95■□□□□ 0.78
SNRPB-201ENST00000381342 IQSEC3Q9UPP2 1182 aaPredicted RBP19.95■□□□□ 0.78
SNRPB-201ENST00000381342 AKAP2Q9Y2D5 859 aa19.95■□□□□ 0.78
SNRPB-201ENST00000381342 ADAMTSL1Q8N6G6 1762 aa19.95■□□□□ 0.78
SNRPB-201ENST00000381342 COL1A1P02452 1464 aaPredicted RBP19.94■□□□□ 0.78
SNRPB-201ENST00000381342 TBC1D10BQ4KMP7 808 aaPredicted RBP19.94■□□□□ 0.78
SNRPB-201ENST00000381342 SAMD7Q7Z3H4 446 aa19.94■□□□□ 0.78
SNRPB-201ENST00000381342 FBXO33Q7Z6M2 555 aa19.94■□□□□ 0.78
SNRPB-201ENST00000381342 VPS37DQ86XT2 251 aa19.94■□□□□ 0.78
SNRPB-201ENST00000381342 ERC1Q8IUD2 1116 aa19.94■□□□□ 0.78
SNRPB-201ENST00000381342 TRPM4Q8TD43 1214 aa19.94■□□□□ 0.78
SNRPB-201ENST00000381342 JAG2Q9Y219 1238 aa19.94■□□□□ 0.78
SNRPB-201ENST00000381342 CENPBP07199 599 aaPredicted RBP19.93■□□□□ 0.78
SNRPB-201ENST00000381342 GTF2IP78347 998 aa19.93■□□□□ 0.78
SNRPB-201ENST00000381342 DEFB115Q30KQ5 88 aa19.93■□□□□ 0.78
SNRPB-201ENST00000381342 HSP90AB4PQ58FF6 505 aa19.93■□□□□ 0.78
SNRPB-201ENST00000381342 TNNI3KQ59H18 835 aa19.93■□□□□ 0.78
SNRPB-201ENST00000381342 DCPSQ96C86 337 aaKnown RBP19.93■□□□□ 0.78
SNRPB-201ENST00000381342 MXD3Q9BW11 206 aa19.93■□□□□ 0.78
SNRPB-201ENST00000381342 PGAP2Q9UHJ9 254 aa19.93■□□□□ 0.78
SNRPB-201ENST00000381342 FPGT-TNNI3KV9GXZ4 949 aa19.93■□□□□ 0.78
SNRPB-201ENST00000381342 PHKA1P46020 1223 aa19.92■□□□□ 0.78
SNRPB-201ENST00000381342 HIRAP54198 1017 aaPredicted RBP19.92■□□□□ 0.78
SNRPB-201ENST00000381342 KIF4BQ2VIQ3 1234 aa19.92■□□□□ 0.78
SNRPB-201ENST00000381342 DACT2Q5SW24 774 aa19.92■□□□□ 0.78
SNRPB-201ENST00000381342 OGFOD1Q8N543 542 aa19.92■□□□□ 0.78
SNRPB-201ENST00000381342 TDRD7Q8NHU6 1098 aaKnown RBP19.92■□□□□ 0.78
SNRPB-201ENST00000381342 RHPN1Q8TCX5 695 aa19.92■□□□□ 0.78
SNRPB-201ENST00000381342 XAGE2Q96GT9 111 aa19.92■□□□□ 0.78
SNRPB-201ENST00000381342 NEUROD6Q96NK8 337 aa19.92■□□□□ 0.78
SNRPB-201ENST00000381342 SHTN1A0MZ66 631 aa19.91■□□□□ 0.78
SNRPB-201ENST00000381342 USP17L8P0C7I0 530 aa19.91■□□□□ 0.78
SNRPB-201ENST00000381342 AAMPQ13685 434 aa19.91■□□□□ 0.78
SNRPB-201ENST00000381342 STRIP1Q5VSL9 837 aa19.91■□□□□ 0.78
SNRPB-201ENST00000381342 TTLL5Q6EMB2 1281 aa19.91■□□□□ 0.78
SNRPB-201ENST00000381342 PAXIP1Q6ZW49 1069 aaPredicted RBP19.91■□□□□ 0.78
SNRPB-201ENST00000381342 GLIS2Q9BZE0 524 aaPredicted RBP19.91■□□□□ 0.78
SNRPB-201ENST00000381342 IL1RAPL2Q9NP60 686 aa19.91■□□□□ 0.78
SNRPB-201ENST00000381342 GPR108Q9NPR9 543 aa19.91■□□□□ 0.78
SNRPB-201ENST00000381342 MYO3BQ8WXR4 1341 aa19.91■□□□□ 0.78
SNRPB-201ENST00000381342 CNTNAP1P78357 1384 aa19.91■□□□□ 0.78
SNRPB-201ENST00000381342 CEP350Q5VT06 3117 aa19.91■□□□□ 0.78
SNRPB-201ENST00000381342 TRAF5O00463 557 aa19.9■□□□□ 0.78
SNRPB-201ENST00000381342 CHAF1AQ13111 956 aaPredicted RBP19.9■□□□□ 0.78
SNRPB-201ENST00000381342 CCDC102BQ68D86 513 aa19.9■□□□□ 0.78
SNRPB-201ENST00000381342 KIF1BPQ96EK5 621 aa19.9■□□□□ 0.78
SNRPB-201ENST00000381342 ZNF408Q9H9D4 720 aa19.9■□□□□ 0.78
SNRPB-201ENST00000381342 TLR7Q9NYK1 1049 aaKnown RBP19.9■□□□□ 0.78
SNRPB-201ENST00000381342 RAB11FIP3O75154 756 aa19.89■□□□□ 0.77
SNRPB-201ENST00000381342 FRAT2O75474 233 aaPredicted RBP19.89■□□□□ 0.77
SNRPB-201ENST00000381342 CELF2O95319 508 aaKnown RBP19.89■□□□□ 0.77
SNRPB-201ENST00000381342 MMP14P50281 582 aa19.89■□□□□ 0.77
SNRPB-201ENST00000381342 USP48Q86UV5 1035 aa19.89■□□□□ 0.77
SNRPB-201ENST00000381342 DBNDD2Q9BQY9 259 aa19.89■□□□□ 0.77
SNRPB-201ENST00000381342 BCL11AQ9H165 835 aa19.89■□□□□ 0.77
SNRPB-201ENST00000381342 HDAC9Q9UKV0 1011 aa19.89■□□□□ 0.77
SNRPB-201ENST00000381342 FAM205AQ6ZU69 1335 aa19.88■□□□□ 0.77
SNRPB-201ENST00000381342 RASSF10A6NK89 507 aa19.88■□□□□ 0.77
SNRPB-201ENST00000381342 ECE1P42892 770 aa19.88■□□□□ 0.77
SNRPB-201ENST00000381342 GORABQ5T7V8 394 aa19.88■□□□□ 0.77
SNRPB-201ENST00000381342 KRT26Q7Z3Y9 468 aa19.88■□□□□ 0.77
SNRPB-201ENST00000381342 SULF1Q8IWU6 871 aa19.88■□□□□ 0.77
SNRPB-201ENST00000381342 CERS5Q8N5B7 392 aa19.88■□□□□ 0.77
SNRPB-201ENST00000381342 EAF2Q96CJ1 260 aaPredicted RBP19.88■□□□□ 0.77
SNRPB-201ENST00000381342 GMLQ99445 158 aa19.88■□□□□ 0.77
SNRPB-201ENST00000381342 DCTPP1Q9H773 170 aa19.88■□□□□ 0.77
SNRPB-201ENST00000381342 DBNLQ9UJU6 430 aaKnown RBP19.88■□□□□ 0.77
SNRPB-201ENST00000381342 AKAP11Q9UKA4 1901 aa19.88■□□□□ 0.77
SNRPB-201ENST00000381342 ZNF280AP59817 542 aaPredicted RBP19.87■□□□□ 0.77
SNRPB-201ENST00000381342 FMR1Q06787 632 aaKnown RBP eCLIP19.87■□□□□ 0.772e-6■□□□□ 11.3
SNRPB-201ENST00000381342 AACSQ86V21 672 aa19.87■□□□□ 0.77
SNRPB-201ENST00000381342 CCDC8Q9H0W5 538 aaPredicted RBP19.87■□□□□ 0.77
SNRPB-201ENST00000381342 MYOZ2Q9NPC6 264 aa19.87■□□□□ 0.77
SNRPB-201ENST00000381342 SMARCA5O60264 1052 aaPredicted RBP19.86■□□□□ 0.77
SNRPB-201ENST00000381342 HSPA1AP0DMV8 641 aaKnown RBP19.86■□□□□ 0.77
SNRPB-201ENST00000381342 HSPA1BP0DMV9 641 aaKnown RBP19.86■□□□□ 0.77
SNRPB-201ENST00000381342 VEGFBP49765 207 aa19.86■□□□□ 0.77
SNRPB-201ENST00000381342 HDAC1Q13547 482 aaPredicted RBP19.86■□□□□ 0.77
SNRPB-201ENST00000381342 AIDAQ96BJ3 306 aa19.86■□□□□ 0.77
SNRPB-201ENST00000381342 LRRCC1Q9C099 1032 aa19.86■□□□□ 0.77
SNRPB-201ENST00000381342 GNL3LQ9NVN8 582 aaKnown RBP19.86■□□□□ 0.77
SNRPB-201ENST00000381342 RASGRF1Q13972 1273 aa19.85■□□□□ 0.77
SNRPB-201ENST00000381342 SCARF1Q14162 830 aa19.85■□□□□ 0.77
SNRPB-201ENST00000381342 MFSD14BQ5SR56 506 aa19.85■□□□□ 0.77
SNRPB-201ENST00000381342 CST9Q5W186 159 aa19.85■□□□□ 0.77
SNRPB-201ENST00000381342 KIAA0825Q8IV33 1275 aa19.85■□□□□ 0.77
SNRPB-201ENST00000381342 CLASRPQ8N2M8 674 aaKnown RBP19.85■□□□□ 0.77
SNRPB-201ENST00000381342 GGA3Q9NZ52 723 aa19.85■□□□□ 0.77
SNRPB-201ENST00000381342 TLL2Q9Y6L7 1015 aa19.85■□□□□ 0.77
SNRPB-201ENST00000381342 ECM29Q5VYK3 1845 aa19.84■□□□□ 0.77
SNRPB-201ENST00000381342 EGFRP00533 1210 aa19.84■□□□□ 0.77
SNRPB-201ENST00000381342 ARID4AP29374 1257 aaPredicted RBP19.84■□□□□ 0.77
SNRPB-201ENST00000381342 GRM1Q13255 1194 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms