RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 LCMT1Q9UIC8 334 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 GOLGA8KD6RF30 607 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 C6orf229H3BNL8 230 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 ALDH3A1P30838 453 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 C8orf34Q49A92 452 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 PPP4R3AQ6IN85 833 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 CACNA2D3Q8IZS8 1091 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 LRRFIP2Q9Y608 721 aaKnown RBP5.54□□□□□ -1.52
PTPRD-203ENST00000381196 RFC4P35249 363 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 MAP3K9P80192 1104 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 ZNF710Q8N1W2 664 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 SH3GL3Q99963 347 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 NCAPGQ9BPX3 1015 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 VIPAS39Q9H9C1 493 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 ZNF287Q9HBT7 754 aa5.54□□□□□ -1.52
PTPRD-203ENST00000381196 GLI2P10070 1586 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 FOXO3O43524 673 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 EIF2S1P05198 315 aaKnown RBP5.53□□□□□ -1.52
PTPRD-203ENST00000381196 ICE2Q659A1 982 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 BIN2Q9UBW5 565 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-203ENST00000381196 CTAGE15A4D2H0 777 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 ARHGAP6O43182 974 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 CTAGE8P0CG41 777 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 CTAGE6Q86UF2 777 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 CTAGE4Q8IX94 777 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 TUBB6Q9BUF5 446 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 PLEKHG2Q9H7P9 1386 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 ADCY5O95622 1261 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 ZNF853P0CG23 659 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 ZNF76P36508 570 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 MAGEA9P43362 315 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 NBPF6Q5VWK0 638 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 SULT6B1Q6IMI4 303 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 NBPF5PQ86XG9 351 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-203ENST00000381196 SMC1BQ8NDV3 1235 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 NBPF4Q96M43 638 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 C16orf45Q96MC5 204 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-203ENST00000381196 TRIM7Q9C029 511 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 FAN1Q9Y2M0 1017 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 ATP7BP35670 1465 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 CCDC151A5D8V7 595 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 MYL6BP14649 208 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 PAFAH1B1P43034 410 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 MPRIPQ6WCQ1 1025 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 AFAP1L1Q8TED9 768 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 MAGEF1Q9HAY2 307 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 N4BP2Q86UW6 1770 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-203ENST00000381196 DLC1Q96QB1 1528 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 GLRX3O76003 335 aaKnown RBP5.53□□□□□ -1.52
PTPRD-203ENST00000381196 SPA17Q15506 151 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 FOXD4L5Q5VV16 416 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-203ENST00000381196 PIP4K2CQ8TBX8 421 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 FOXD4L4Q8WXT5 416 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-203ENST00000381196 JDP2Q8WYK2 163 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 TAF4BQ92750 862 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 DNAJC5BQ9UF47 199 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 SHPRHQ149N8 1683 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 PXDNLA1KZ92 1463 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 PTCD1O75127 700 aaKnown RBP5.53□□□□□ -1.52
PTPRD-203ENST00000381196 LMNAP02545 664 aaKnown RBP5.53□□□□□ -1.52
PTPRD-203ENST00000381196 CAVIN4Q5BKX8 364 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 CFAP61Q8NHU2 1237 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 UBA5Q9GZZ9 404 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 AMOTL2Q9Y2J4 779 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 ATP10DQ9P241 1426 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 ENOX2Q16206 610 aaKnown RBP5.53□□□□□ -1.52
PTPRD-203ENST00000381196 GRIPAP1Q4V328 841 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 LRRC45Q96CN5 670 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTPRD-203ENST00000381196 CEP126Q9P2H0 1117 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 MACROD2A1Z1Q3 448 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 CDC42BPGQ6DT37 1551 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 ADAMTS8Q9UP79 889 aa5.53□□□□□ -1.52
PTPRD-203ENST00000381196 BTBD11A6QL63 1104 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 RLBP1P12271 317 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 BPIFA3Q9BQP9 254 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 MIS12Q9H081 205 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 FOXD4L1Q9NU39 408 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 LRP2BPQ9P2M1 347 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 LRRC7Q96NW7 1537 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 KIAA0232Q92628 1395 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 IQSEC2Q5JU85 1478 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 PRC1O43663 620 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 ATP5HO75947 161 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 TRIML1Q8N9V2 468 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 TOP1P11387 765 aaKnown RBP5.52□□□□□ -1.53
PTPRD-203ENST00000381196 STK38Q15208 465 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 PARP3Q9Y6F1 533 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 FMN2Q9NZ56 1722 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 SURF6O75683 361 aaKnown RBP5.52□□□□□ -1.53
PTPRD-203ENST00000381196 ATP11AP98196 1134 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 MCTP2Q6DN12 878 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 PPP1R2P3Q6NXS1 205 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 TFCP2L1Q9NZI6 479 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 TNRQ92752 1358 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 DYTNA2CJ06 578 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 MATR3P43243 847 aaKnown RBP eCLIP5.52□□□□□ -1.53
PTPRD-203ENST00000381196 TRPC3Q13507 836 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 SETDB1Q15047 1291 aa5.52□□□□□ -1.53
PTPRD-203ENST00000381196 ERVK-7P63135 1459 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms