RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 AOPEPQ8N6M6 819 aa22.74■■□□□ 1.23
FOXC1-201ENST00000380874 TSGA10IPQ3SY00 556 aa22.73■■□□□ 1.23
FOXC1-201ENST00000380874 MRPS27Q92552 414 aaKnown RBP22.73■■□□□ 1.23
FOXC1-201ENST00000380874 TRMT1Q9NXH9 659 aaKnown RBP22.73■■□□□ 1.23
FOXC1-201ENST00000380874 LRP2BPQ9P2M1 347 aa22.73■■□□□ 1.23
FOXC1-201ENST00000380874 LRRC37A3O60309 1634 aa22.73■■□□□ 1.23
FOXC1-201ENST00000380874 ERICH2A1L162 156 aa22.73■■□□□ 1.23
FOXC1-201ENST00000380874 CCDC69A6NI79 296 aa22.73■■□□□ 1.23
FOXC1-201ENST00000380874 CTAGE5O15320 804 aa22.73■■□□□ 1.23
FOXC1-201ENST00000380874 DZIP3Q86Y13 1208 aaKnown RBP22.73■■□□□ 1.23
FOXC1-201ENST00000380874 MYL10Q9BUA6 226 aa22.73■■□□□ 1.23
FOXC1-201ENST00000380874 TNS3Q68CZ2 1445 aa22.73■■□□□ 1.23
FOXC1-201ENST00000380874 B4E1Z4 1266 aa22.73■■□□□ 1.23
FOXC1-201ENST00000380874 DYNC1I1O14576 645 aa22.73■■□□□ 1.23
FOXC1-201ENST00000380874 HLFQ16534 295 aa22.73■■□□□ 1.23
FOXC1-201ENST00000380874 NAA16Q6N069 864 aaPredicted RBP22.73■■□□□ 1.23
FOXC1-201ENST00000380874 OVOS2A0A0G2JMS6 1433 aa22.73■■□□□ 1.23
FOXC1-201ENST00000380874 IFIT3O14879 490 aaKnown RBP22.72■■□□□ 1.23
FOXC1-201ENST00000380874 ALG1Q9BT22 464 aa22.72■■□□□ 1.23
FOXC1-201ENST00000380874 TMEM67Q5HYA8 995 aa22.72■■□□□ 1.23
FOXC1-201ENST00000380874 PIGBQ92521 554 aa22.72■■□□□ 1.23
FOXC1-201ENST00000380874 CARD10Q9BWT7 1032 aa22.72■■□□□ 1.23
FOXC1-201ENST00000380874 GPR108Q9NPR9 543 aa22.72■■□□□ 1.23
FOXC1-201ENST00000380874 SAFBQ15424 915 aaKnown RBP eCLIP22.71■■□□□ 1.23
FOXC1-201ENST00000380874 GOLGA8AA7E2F4 631 aa22.71■■□□□ 1.23
FOXC1-201ENST00000380874 MINDY4BA8MYZ0 360 aa22.71■■□□□ 1.23
FOXC1-201ENST00000380874 SNAP23O00161 211 aa22.71■■□□□ 1.23
FOXC1-201ENST00000380874 CASP7P55210 303 aa22.71■■□□□ 1.23
FOXC1-201ENST00000380874 AKAP17AQ02040 695 aaKnown RBP22.71■■□□□ 1.23
FOXC1-201ENST00000380874 BICDL1Q6ZP65 573 aa22.71■■□□□ 1.23
FOXC1-201ENST00000380874 COL15A1P39059 1388 aa22.71■■□□□ 1.23
FOXC1-201ENST00000380874 ZNF75DP51815 510 aa22.7■■□□□ 1.22
FOXC1-201ENST00000380874 ZBTB38Q8NAP3 1195 aaPredicted RBP22.7■■□□□ 1.22
FOXC1-201ENST00000380874 PHKBQ93100 1093 aa22.7■■□□□ 1.22
FOXC1-201ENST00000380874 SPTLC2O15270 562 aa22.7■■□□□ 1.22
FOXC1-201ENST00000380874 AP5Z1O43299 807 aa22.7■■□□□ 1.22
FOXC1-201ENST00000380874 PCCAP05165 728 aaPredicted RBP22.7■■□□□ 1.22
FOXC1-201ENST00000380874 SLC3A2P08195 630 aaKnown RBP22.7■■□□□ 1.22
FOXC1-201ENST00000380874 MAP7D2Q96T17 732 aa22.7■■□□□ 1.22
FOXC1-201ENST00000380874 TNNT1P13805 278 aa22.69■■□□□ 1.22
FOXC1-201ENST00000380874 FAM160A1Q05DH4 1040 aa22.69■■□□□ 1.22
FOXC1-201ENST00000380874 LRP10Q7Z4F1 713 aa22.69■■□□□ 1.22
FOXC1-201ENST00000380874 ZKSCAN3Q9BRR0 538 aa22.69■■□□□ 1.22
FOXC1-201ENST00000380874 ZBTB1Q9Y2K1 713 aa22.69■■□□□ 1.22
FOXC1-201ENST00000380874 ADD1P35611 737 aaKnown RBP22.69■■□□□ 1.22
FOXC1-201ENST00000380874 MAP3K12Q12852 859 aa22.69■■□□□ 1.22
FOXC1-201ENST00000380874 SLC26A6Q9BXS9 759 aa22.69■■□□□ 1.22
FOXC1-201ENST00000380874 CIAO1O76071 339 aa22.69■■□□□ 1.22
FOXC1-201ENST00000380874 MAGEB6Q8N7X4 407 aa22.69■■□□□ 1.22
FOXC1-201ENST00000380874 ZNF274Q96GC6 653 aaPredicted RBP22.69■■□□□ 1.22
FOXC1-201ENST00000380874 CDKL5O76039 1030 aa22.68■■□□□ 1.22
FOXC1-201ENST00000380874 IARSP41252 1262 aaKnown RBP22.68■■□□□ 1.22
FOXC1-201ENST00000380874 ZNF532Q9HCE3 1301 aa22.68■■□□□ 1.22
FOXC1-201ENST00000380874 TTF1Q15361 905 aaPredicted RBP22.68■■□□□ 1.22
FOXC1-201ENST00000380874 MIGA1Q8NAN2 632 aa22.68■■□□□ 1.22
FOXC1-201ENST00000380874 RAI14Q9P0K7 980 aa22.68■■□□□ 1.22
FOXC1-201ENST00000380874 SLC12A7Q9Y666 1083 aa22.68■■□□□ 1.22
FOXC1-201ENST00000380874 SLC5A1P13866 664 aa22.68■■□□□ 1.22
FOXC1-201ENST00000380874 PHKA1P46020 1223 aa22.68■■□□□ 1.22
FOXC1-201ENST00000380874 C11orf57Q6ZUT1 292 aaPredicted RBP22.68■■□□□ 1.22
FOXC1-201ENST00000380874 CREBRFQ8IUR6 639 aa22.68■■□□□ 1.22
FOXC1-201ENST00000380874 SART3Q15020 963 aaKnown RBP22.67■■□□□ 1.22
FOXC1-201ENST00000380874 ZBTB43O43298 467 aa22.67■■□□□ 1.22
FOXC1-201ENST00000380874 PRIMPOLQ96LW4 560 aa22.67■■□□□ 1.22
FOXC1-201ENST00000380874 NACAP1Q9BZK3 213 aa22.67■■□□□ 1.22
FOXC1-201ENST00000380874 CLIC4Q9Y696 253 aa22.67■■□□□ 1.22
FOXC1-201ENST00000380874 ALDH8A1Q9H2A2 487 aaPredicted RBP22.67■■□□□ 1.22
FOXC1-201ENST00000380874 PCDHA7Q9UN72 937 aa22.67■■□□□ 1.22
FOXC1-201ENST00000380874 IGHMBP2P38935 993 aaKnown RBP22.66■■□□□ 1.22
FOXC1-201ENST00000380874 FUCA2Q9BTY2 467 aa22.66■■□□□ 1.22
FOXC1-201ENST00000380874 MST1RQ04912 1400 aa22.66■■□□□ 1.22
FOXC1-201ENST00000380874 CTDNEP1O95476 244 aa22.66■■□□□ 1.22
FOXC1-201ENST00000380874 CTSWP56202 376 aa22.66■■□□□ 1.22
FOXC1-201ENST00000380874 AIFM3Q96NN9 605 aa22.66■■□□□ 1.22
FOXC1-201ENST00000380874 CARMIL3Q8ND23 1372 aa22.66■■□□□ 1.22
FOXC1-201ENST00000380874 MBD4O95243 580 aa22.66■■□□□ 1.22
FOXC1-201ENST00000380874 GIGYF2Q6Y7W6 1299 aaKnown RBP22.66■■□□□ 1.22
FOXC1-201ENST00000380874 HSP90AA4PQ58FG1 418 aa22.65■■□□□ 1.22
FOXC1-201ENST00000380874 JMYQ8N9B5 988 aa22.65■■□□□ 1.22
FOXC1-201ENST00000380874 KCNG4Q8TDN1 519 aa22.65■■□□□ 1.22
FOXC1-201ENST00000380874 HOMER1Q86YM7 354 aa22.65■■□□□ 1.22
FOXC1-201ENST00000380874 ISCA1Q9BUE6 129 aa22.65■■□□□ 1.22
FOXC1-201ENST00000380874 ARMT1Q9H993 441 aa22.65■■□□□ 1.22
FOXC1-201ENST00000380874 MAP3K15Q6ZN16 1313 aa22.65■■□□□ 1.22
FOXC1-201ENST00000380874 MCAMP43121 646 aa22.65■■□□□ 1.22
FOXC1-201ENST00000380874 CTDSPL2Q05D32 466 aa22.65■■□□□ 1.22
FOXC1-201ENST00000380874 GOLPH3LQ9H4A5 285 aa22.65■■□□□ 1.22
FOXC1-201ENST00000380874 RCOR1Q9UKL0 485 aa22.65■■□□□ 1.22
FOXC1-201ENST00000380874 ZNF335Q9H4Z2 1342 aaPredicted RBP22.65■■□□□ 1.22
FOXC1-201ENST00000380874 SERPINC1P01008 464 aa22.64■■□□□ 1.22
FOXC1-201ENST00000380874 NLRP10Q86W26 655 aa22.64■■□□□ 1.22
FOXC1-201ENST00000380874 TRIM22Q8IYM9 498 aa22.64■■□□□ 1.22
FOXC1-201ENST00000380874 CCDC112Q8NEF3 446 aa22.64■■□□□ 1.22
FOXC1-201ENST00000380874 INCENPQ9NQS7 918 aa22.64■■□□□ 1.22
FOXC1-201ENST00000380874 CDK11BP21127 795 aaKnown RBP22.64■■□□□ 1.22
FOXC1-201ENST00000380874 EXOSC10Q01780 885 aaKnown RBP22.64■■□□□ 1.22
FOXC1-201ENST00000380874 CCDC102BQ68D86 513 aa22.64■■□□□ 1.22
FOXC1-201ENST00000380874 SMARCC2Q8TAQ2 1214 aa22.64■■□□□ 1.22
FOXC1-201ENST00000380874 MTMR7Q9Y216 660 aa22.64■■□□□ 1.22
FOXC1-201ENST00000380874 TERF1P54274 439 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms