RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 FKBP4Q02790 459 aaKnown RBP eCLIP12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 CAVIN1Q6NZI2 390 aaKnown RBP12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 CLEC4GQ6UXB4 293 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 DNAJC5GQ8N7S2 189 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 APPBP2Q92624 585 aa12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 CCDC85AQ96PX6 553 aaPredicted RBP12.43□□□□□ -0.42
POLR2J3-201ENST00000379340 HSPD1P10809 573 aaKnown RBP12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 ARID4AP29374 1257 aaPredicted RBP12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 ST3GAL1Q11201 340 aa12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 ITPK1Q13572 414 aa12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 PUM3Q15397 648 aaKnown RBP12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 ZSCAN23Q3MJ62 389 aa12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 FOXD4L5Q5VV16 416 aaPredicted RBP12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 DHX32Q7L7V1 743 aaKnown RBP12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 SYNE4Q8N205 404 aa12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 GPT2Q8TD30 523 aa12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 FOXD4L4Q8WXT5 416 aaPredicted RBP12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 LPIN2Q92539 896 aa12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 CD2APQ9Y5K6 639 aa12.42□□□□□ -0.42
POLR2J3-201ENST00000379340 SCN7AQ01118 1682 aa12.41□□□□□ -0.42
POLR2J3-201ENST00000379340 CCDC152Q4G0S7 254 aa12.41□□□□□ -0.42
POLR2J3-201ENST00000379340 SUSD4Q5VX71 490 aa12.41□□□□□ -0.42
POLR2J3-201ENST00000379340 LARP6Q9BRS8 491 aaKnown RBP12.41□□□□□ -0.42
POLR2J3-201ENST00000379340 MTMR6Q9Y217 621 aa12.41□□□□□ -0.42
POLR2J3-201ENST00000379340 CNTNAP4Q9C0A0 1308 aa12.41□□□□□ -0.42
POLR2J3-201ENST00000379340 M0R2C6 588 aa12.4□□□□□ -0.42
POLR2J3-201ENST00000379340 NTSR2O95665 410 aa12.4□□□□□ -0.42
POLR2J3-201ENST00000379340 SLC5A1P13866 664 aa12.4□□□□□ -0.42
POLR2J3-201ENST00000379340 FGFR2P21802 821 aa12.4□□□□□ -0.42
POLR2J3-201ENST00000379340 ZAP70P43403 619 aa12.4□□□□□ -0.42
POLR2J3-201ENST00000379340 Q6ZUG5 572 aa12.4□□□□□ -0.42
POLR2J3-201ENST00000379340 FBXL16Q8N461 479 aa12.4□□□□□ -0.42
POLR2J3-201ENST00000379340 GTF3C6Q969F1 213 aa12.4□□□□□ -0.42
POLR2J3-201ENST00000379340 LLPHQ9BRT6 129 aaKnown RBP12.4□□□□□ -0.42
POLR2J3-201ENST00000379340 AGXT2Q9BYV1 514 aa12.4□□□□□ -0.42
POLR2J3-201ENST00000379340 TAF6LQ9Y6J9 622 aa12.4□□□□□ -0.42
POLR2J3-201ENST00000379340 DOCK2Q92608 1830 aa12.4□□□□□ -0.42
POLR2J3-201ENST00000379340 PHF14O94880 888 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 UBE3CQ15386 1083 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 WASHC4Q2M389 1173 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 LARP1BQ659C4 914 aaKnown RBP12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 GAS2L3Q86XJ1 694 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 NECAB1Q8N987 351 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 OSBP2Q969R2 916 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 NIP7Q9Y221 180 aaKnown RBP eCLIP12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 TCHHQ07283 1943 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 E7EWF7 191 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 PFKFB2O60825 505 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 CHGBP05060 677 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 IGHMBP2P38935 993 aaKnown RBP12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 MCAMP43121 646 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 HTRA3P83110 453 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 FGD1P98174 961 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 EXOSC10Q01780 885 aaKnown RBP12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 SCARF1Q14162 830 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 IMMTQ16891 758 aaKnown RBP12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 COL13A1Q5TAT6 717 aaPredicted RBP12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 STOX1Q6ZVD7 989 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 USP48Q86UV5 1035 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 KIF3AQ9Y496 699 aa12.39□□□□□ -0.43
POLR2J3-201ENST00000379340 WDR19Q8NEZ3 1342 aa12.38□□□□□ -0.43
POLR2J3-201ENST00000379340 CAPN15O75808 1086 aa12.38□□□□□ -0.43
POLR2J3-201ENST00000379340 ADD2P35612 726 aa12.38□□□□□ -0.43
POLR2J3-201ENST00000379340 UBE2HP62256 183 aa12.38□□□□□ -0.43
POLR2J3-201ENST00000379340 RC3H1Q5TC82 1133 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-201ENST00000379340 CCDC102BQ68D86 513 aa12.38□□□□□ -0.43
POLR2J3-201ENST00000379340 LRSAM1Q6UWE0 723 aa12.38□□□□□ -0.43
POLR2J3-201ENST00000379340 ANP32BQ92688 251 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-201ENST00000379340 VPS37CA5D8V6 355 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-201ENST00000379340 LETM1O95202 739 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-201ENST00000379340 APLP1P51693 650 aa12.37□□□□□ -0.43
POLR2J3-201ENST00000379340 HMGN5P82970 282 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-201ENST00000379340 TCEANC2Q96MN5 208 aa12.37□□□□□ -0.43
POLR2J3-201ENST00000379340 CDC5LQ99459 802 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-201ENST00000379340 TMEM63CQ9P1W3 806 aa12.37□□□□□ -0.43
POLR2J3-201ENST00000379340 A0A1B0GUL6 1792 aa12.36□□□□□ -0.43
POLR2J3-201ENST00000379340 ZMYM6O95789 1325 aa12.36□□□□□ -0.43
POLR2J3-201ENST00000379340 GPAA1O43292 621 aa12.36□□□□□ -0.43
POLR2J3-201ENST00000379340 HCLS1P14317 486 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-201ENST00000379340 FAM43AQ8N2R8 423 aa12.36□□□□□ -0.43
POLR2J3-201ENST00000379340 SMARCC2Q8TAQ2 1214 aa12.36□□□□□ -0.43
POLR2J3-201ENST00000379340 BRF1Q92994 677 aa12.36□□□□□ -0.43
POLR2J3-201ENST00000379340 ZNF274Q96GC6 653 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-201ENST00000379340 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
POLR2J3-201ENST00000379340 TAF1LQ8IZX4 1826 aa12.36□□□□□ -0.43
POLR2J3-201ENST00000379340 ELP1O95163 1332 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 PHKA1P46020 1223 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 NASPP49321 788 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 EVCP57679 992 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 KRT85P78386 507 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 CCDC173Q0VFZ6 552 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 SLFNL1Q499Z3 407 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 LINC00116Q8NCU8 138 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 CHAMP1Q96JM3 812 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 PANK2Q9BZ23 570 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 STK3Q13188 491 aa12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 COL9A3Q14050 684 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-201ENST00000379340 SF3B3Q15393 1217 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms