RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 C4AP0C0L4 1744 aa23.1■■□□□ 1.29
SSU72-204ENST00000378726 PKP1Q13835 747 aa23.1■■□□□ 1.29
SSU72-204ENST00000378726 CNBD1Q8NA66 436 aa23.1■■□□□ 1.29
SSU72-204ENST00000378726 APBA3O96018 575 aa23.09■■□□□ 1.29
SSU72-204ENST00000378726 RPS6KB1P23443 525 aa23.09■■□□□ 1.29
SSU72-204ENST00000378726 MCTP1Q6DN14 999 aa23.09■■□□□ 1.29
SSU72-204ENST00000378726 NEK1Q96PY6 1258 aa23.09■■□□□ 1.29
SSU72-204ENST00000378726 TAF1P21675 1872 aa23.09■■□□□ 1.29
SSU72-204ENST00000378726 UBE3CQ15386 1083 aa23.09■■□□□ 1.29
SSU72-204ENST00000378726 PLSCR1O15162 318 aa23.08■■□□□ 1.29
SSU72-204ENST00000378726 ZSCAN31Q96LW9 406 aaPredicted RBP23.08■■□□□ 1.28
SSU72-204ENST00000378726 TCEANC2Q96MN5 208 aa23.08■■□□□ 1.28
SSU72-204ENST00000378726 GPAA1O43292 621 aa23.07■■□□□ 1.28
SSU72-204ENST00000378726 PRR5LQ6MZQ0 368 aa23.07■■□□□ 1.28
SSU72-204ENST00000378726 ALDH8A1Q9H2A2 487 aaPredicted RBP23.07■■□□□ 1.28
SSU72-204ENST00000378726 WWC3Q9ULE0 1092 aa23.07■■□□□ 1.28
SSU72-204ENST00000378726 ZNF532Q9HCE3 1301 aa23.07■■□□□ 1.28
SSU72-204ENST00000378726 PDE6AP16499 860 aa23.06■■□□□ 1.28
SSU72-204ENST00000378726 GYG1P46976 350 aa23.06■■□□□ 1.28
SSU72-204ENST00000378726 UBR3Q6ZT12 1888 aa23.06■■□□□ 1.28
SSU72-204ENST00000378726 SERPINB2P05120 415 aa23.06■■□□□ 1.28
SSU72-204ENST00000378726 NASPP49321 788 aaPredicted RBP23.06■■□□□ 1.28
SSU72-204ENST00000378726 MAP3K12Q12852 859 aa23.06■■□□□ 1.28
SSU72-204ENST00000378726 ARAP2Q8WZ64 1704 aa23.06■■□□□ 1.28
SSU72-204ENST00000378726 ANKRD1Q15327 319 aa23.05■■□□□ 1.28
SSU72-204ENST00000378726 CAVIN4Q5BKX8 364 aa23.05■■□□□ 1.28
SSU72-204ENST00000378726 ANKRD2Q9GZV1 360 aa23.05■■□□□ 1.28
SSU72-204ENST00000378726 LMBRD1Q9NUN5 540 aa23.05■■□□□ 1.28
SSU72-204ENST00000378726 GNL3LQ9NVN8 582 aaKnown RBP23.05■■□□□ 1.28
SSU72-204ENST00000378726 CTNNA3Q9UI47 895 aa23.05■■□□□ 1.28
SSU72-204ENST00000378726 IQSEC3Q9UPP2 1182 aaPredicted RBP23.05■■□□□ 1.28
SSU72-204ENST00000378726 A0A0G2JLW4 131 aa23.05■■□□□ 1.28
SSU72-204ENST00000378726 LARGE1O95461 756 aa23.05■■□□□ 1.28
SSU72-204ENST00000378726 TTLL5Q6EMB2 1281 aa23.05■■□□□ 1.28
SSU72-204ENST00000378726 SH2B1Q9NRF2 756 aaPredicted RBP23.05■■□□□ 1.28
SSU72-204ENST00000378726 TFCP2L1Q9NZI6 479 aa23.05■■□□□ 1.28
SSU72-204ENST00000378726 TCRBV5S4A2TA0A5A2 114 aa23.04■■□□□ 1.28
SSU72-204ENST00000378726 FOXP2O15409 715 aa23.04■■□□□ 1.28
SSU72-204ENST00000378726 FGAP02671 866 aa23.04■■□□□ 1.28
SSU72-204ENST00000378726 STOX1Q6ZVD7 989 aa23.04■■□□□ 1.28
SSU72-204ENST00000378726 FAM84BQ96KN1 310 aaPredicted RBP23.04■■□□□ 1.28
SSU72-204ENST00000378726 TPCN1Q9ULQ1 816 aa23.04■■□□□ 1.28
SSU72-204ENST00000378726 ZDHHC9Q9Y397 364 aa23.04■■□□□ 1.28
SSU72-204ENST00000378726 CCDC173Q0VFZ6 552 aa23.04■■□□□ 1.28
SSU72-204ENST00000378726 ME3Q16798 604 aa23.04■■□□□ 1.28
SSU72-204ENST00000378726 VPS37DQ86XT2 251 aa23.04■■□□□ 1.28
SSU72-204ENST00000378726 PPP1R9BQ96SB3 815 aa23.04■■□□□ 1.28
SSU72-204ENST00000378726 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.04■■□□□ 1.28
SSU72-204ENST00000378726 ZNF804BA4D1E1 1349 aa23.03■■□□□ 1.28
SSU72-204ENST00000378726 NCLP19338 710 aaKnown RBP23.03■■□□□ 1.28
SSU72-204ENST00000378726 MAGEB6Q8N7X4 407 aa23.03■■□□□ 1.28
SSU72-204ENST00000378726 TOB2Q14106 344 aaPredicted RBP23.02■■□□□ 1.28
SSU72-204ENST00000378726 CASZ1Q86V15 1759 aa23.02■■□□□ 1.28
SSU72-204ENST00000378726 E7EWF7 191 aa23.02■■□□□ 1.28
SSU72-204ENST00000378726 HMGB1P09429 215 aaKnown RBP23.02■■□□□ 1.28
SSU72-204ENST00000378726 ST5P78524 1137 aa23.02■■□□□ 1.28
SSU72-204ENST00000378726 GRAPQ13588 217 aa23.02■■□□□ 1.28
SSU72-204ENST00000378726 CAVIN1Q6NZI2 390 aaKnown RBP23.02■■□□□ 1.28
SSU72-204ENST00000378726 CCDC83Q8IWF9 413 aa23.02■■□□□ 1.28
SSU72-204ENST00000378726 GRAPLQ8TC17 118 aaPredicted RBP23.02■■□□□ 1.28
SSU72-204ENST00000378726 ZNF445P59923 1031 aa23.01■■□□□ 1.27
SSU72-204ENST00000378726 LRP2BPQ9P2M1 347 aa23.01■■□□□ 1.27
SSU72-204ENST00000378726 IMMTQ16891 758 aaKnown RBP23.01■■□□□ 1.27
SSU72-204ENST00000378726 ZNF827Q17R98 1081 aa23.01■■□□□ 1.27
SSU72-204ENST00000378726 GLIPR1L2Q4G1C9 344 aa23.01■■□□□ 1.27
SSU72-204ENST00000378726 FBXO33Q7Z6M2 555 aa23.01■■□□□ 1.27
SSU72-204ENST00000378726 ZSCAN23Q3MJ62 389 aa23■■□□□ 1.27
SSU72-204ENST00000378726 Q6ZUG5 572 aa23■■□□□ 1.27
SSU72-204ENST00000378726 DHX32Q7L7V1 743 aaKnown RBP23■■□□□ 1.27
SSU72-204ENST00000378726 AIDAQ96BJ3 306 aa23■■□□□ 1.27
SSU72-204ENST00000378726 DDR1Q08345 913 aa23■■□□□ 1.27
SSU72-204ENST00000378726 NECAB1Q8N987 351 aa23■■□□□ 1.27
SSU72-204ENST00000378726 AKT1S1Q96B36 256 aa23■■□□□ 1.27
SSU72-204ENST00000378726 SMC3Q9UQE7 1217 aa23■■□□□ 1.27
SSU72-204ENST00000378726 MYH7P12883 1935 aa22.99■■□□□ 1.27
SSU72-204ENST00000378726 HAND2P61296 217 aa22.99■■□□□ 1.27
SSU72-204ENST00000378726 RPGRQ92834 1020 aaKnown RBP22.99■■□□□ 1.27
SSU72-204ENST00000378726 STRBPQ96SI9 672 aaKnown RBP22.99■■□□□ 1.27
SSU72-204ENST00000378726 RGS17Q9UGC6 210 aaPredicted RBP22.99■■□□□ 1.27
SSU72-204ENST00000378726 MYO5AQ9Y4I1 1855 aaKnown RBP22.99■■□□□ 1.27
SSU72-204ENST00000378726 POLRMTO00411 1230 aaKnown RBP22.98■■□□□ 1.27
SSU72-204ENST00000378726 APPP05067 770 aa22.98■■□□□ 1.27
SSU72-204ENST00000378726 KLRK1P26718 216 aa22.98■■□□□ 1.27
SSU72-204ENST00000378726 ABCF2Q9UG63 623 aa22.98■■□□□ 1.27
SSU72-204ENST00000378726 DENND2AQ9ULE3 1009 aa22.98■■□□□ 1.27
SSU72-204ENST00000378726 ZNF213O14771 459 aa22.98■■□□□ 1.27
SSU72-204ENST00000378726 PRPF40AO75400 957 aaKnown RBP22.98■■□□□ 1.27
SSU72-204ENST00000378726 BRD1O95696 1058 aa22.98■■□□□ 1.27
SSU72-204ENST00000378726 FOXD4L5Q5VV16 416 aaPredicted RBP22.98■■□□□ 1.27
SSU72-204ENST00000378726 COL23A1Q86Y22 540 aaPredicted RBP22.98■■□□□ 1.27
SSU72-204ENST00000378726 FOXD4L4Q8WXT5 416 aaPredicted RBP22.98■■□□□ 1.27
SSU72-204ENST00000378726 CHAMP1Q96JM3 812 aa22.98■■□□□ 1.27
SSU72-204ENST00000378726 TNRC6CQ9HCJ0 1690 aaKnown RBP22.97■■□□□ 1.27
SSU72-204ENST00000378726 HIBADHP31937 336 aaKnown RBP22.97■■□□□ 1.27
SSU72-204ENST00000378726 CRY2Q49AN0 593 aa22.97■■□□□ 1.27
SSU72-204ENST00000378726 LRRC2Q9BYS8 371 aa22.97■■□□□ 1.27
SSU72-204ENST00000378726 FGD1P98174 961 aa22.97■■□□□ 1.27
SSU72-204ENST00000378726 EXOSC10Q01780 885 aaKnown RBP22.97■■□□□ 1.27
SSU72-204ENST00000378726 ST3GAL1Q11201 340 aa22.97■■□□□ 1.27
SSU72-204ENST00000378726 ANKIB1Q9P2G1 1089 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms