RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 HACL1Q9UJ83 578 aa23.05■■□□□ 1.28
SSU72-203ENST00000378725 IQSEC3Q9UPP2 1182 aaPredicted RBP23.05■■□□□ 1.28
SSU72-203ENST00000378725 MYO3BQ8WXR4 1341 aa23.05■■□□□ 1.28
SSU72-203ENST00000378725 FRAT2O75474 233 aaPredicted RBP23.04■■□□□ 1.28
SSU72-203ENST00000378725 LMOD1P29536 600 aaPredicted RBP23.04■■□□□ 1.28
SSU72-203ENST00000378725 EPS15P42566 896 aa23.04■■□□□ 1.28
SSU72-203ENST00000378725 FBXW7Q969H0 707 aa23.04■■□□□ 1.28
SSU72-203ENST00000378725 TAF1DQ9H5J8 278 aaPredicted RBP23.04■■□□□ 1.28
SSU72-203ENST00000378725 CNOT7Q9UIV1 285 aaKnown RBP23.04■■□□□ 1.28
SSU72-203ENST00000378725 ARAP2Q8WZ64 1704 aa23.04■■□□□ 1.28
SSU72-203ENST00000378725 IGHDP01880 384 aa23.03■■□□□ 1.28
SSU72-203ENST00000378725 GORABQ5T7V8 394 aa23.03■■□□□ 1.28
SSU72-203ENST00000378725 AACSQ86V21 672 aa23.03■■□□□ 1.28
SSU72-203ENST00000378725 CERS5Q8N5B7 392 aa23.03■■□□□ 1.28
SSU72-203ENST00000378725 GCC1Q96CN9 775 aa23.03■■□□□ 1.28
SSU72-203ENST00000378725 DBNLQ9UJU6 430 aaKnown RBP23.03■■□□□ 1.28
SSU72-203ENST00000378725 DENND2AQ9ULE3 1009 aa23.03■■□□□ 1.28
SSU72-203ENST00000378725 PSME4Q14997 1843 aa23.03■■□□□ 1.28
SSU72-203ENST00000378725 ARID4AP29374 1257 aaPredicted RBP23.02■■□□□ 1.28
SSU72-203ENST00000378725 EPHX2P34913 555 aa23.02■■□□□ 1.28
SSU72-203ENST00000378725 ZNF512BQ96KM6 892 aaPredicted RBP23.02■■□□□ 1.28
SSU72-203ENST00000378725 TLR7Q9NYK1 1049 aaKnown RBP23.02■■□□□ 1.28
SSU72-203ENST00000378725 ZNF646O15015 1829 aaPredicted RBP23.01■■□□□ 1.27
SSU72-203ENST00000378725 UQCRFS1P1P0C7P4 283 aa23.01■■□□□ 1.27
SSU72-203ENST00000378725 MMP14P50281 582 aa23.01■■□□□ 1.27
SSU72-203ENST00000378725 ZNF280AP59817 542 aaPredicted RBP23.01■■□□□ 1.27
SSU72-203ENST00000378725 CCDC158Q5M9N0 1113 aa23.01■■□□□ 1.27
SSU72-203ENST00000378725 MICALL2Q8IY33 904 aa23.01■■□□□ 1.27
SSU72-203ENST00000378725 TBC1D22AQ8WUA7 517 aa23.01■■□□□ 1.27
SSU72-203ENST00000378725 JAG2Q9Y219 1238 aa23.01■■□□□ 1.27
SSU72-203ENST00000378725 PDS5AQ29RF7 1337 aaKnown RBP23.01■■□□□ 1.27
SSU72-203ENST00000378725 SHTN1A0MZ66 631 aa23■■□□□ 1.27
SSU72-203ENST00000378725 H7C1D1 291 aa23■■□□□ 1.27
SSU72-203ENST00000378725 SMARCA5O60264 1052 aaPredicted RBP23■■□□□ 1.27
SSU72-203ENST00000378725 USP17L8P0C7I0 530 aa23■■□□□ 1.27
SSU72-203ENST00000378725 CHAF1AQ13111 956 aaPredicted RBP23■■□□□ 1.27
SSU72-203ENST00000378725 RASGRF1Q13972 1273 aa23■■□□□ 1.27
SSU72-203ENST00000378725 MFSD14BQ5SR56 506 aa23■■□□□ 1.27
SSU72-203ENST00000378725 WDR66Q8TBY9 1149 aa23■■□□□ 1.27
SSU72-203ENST00000378725 ADARB2Q9NS39 739 aaKnown RBP23■■□□□ 1.27
SSU72-203ENST00000378725 SCN4AP35499 1836 aa23■■□□□ 1.27
SSU72-203ENST00000378725 IFIT2P09913 472 aaKnown RBP22.99■■□□□ 1.27
SSU72-203ENST00000378725 PNMA8AQ86V59 439 aaPredicted RBP22.99■■□□□ 1.27
SSU72-203ENST00000378725 SMC5Q8IY18 1101 aa22.99■■□□□ 1.27
SSU72-203ENST00000378725 COL1A1P02452 1464 aaPredicted RBP22.98■■□□□ 1.27
SSU72-203ENST00000378725 TTC39AQ5SRH9 613 aa22.98■■□□□ 1.27
SSU72-203ENST00000378725 USP50Q70EL3 339 aaPredicted RBP22.98■■□□□ 1.27
SSU72-203ENST00000378725 HMG20BQ9P0W2 317 aa22.98■■□□□ 1.27
SSU72-203ENST00000378725 SUGT1Q9Y2Z0 365 aa22.98■■□□□ 1.27
SSU72-203ENST00000378725 SALL1Q9NSC2 1324 aa22.98■■□□□ 1.27
SSU72-203ENST00000378725 KIAA0825Q8IV33 1275 aa22.97■■□□□ 1.27
SSU72-203ENST00000378725 SPATA5Q8NB90 893 aa22.97■■□□□ 1.27
SSU72-203ENST00000378725 MCAMP43121 646 aa22.96■■□□□ 1.27
SSU72-203ENST00000378725 SCARF1Q14162 830 aa22.96■■□□□ 1.27
SSU72-203ENST00000378725 SAMD7Q7Z3H4 446 aa22.96■■□□□ 1.27
SSU72-203ENST00000378725 OGFOD1Q8N543 542 aa22.96■■□□□ 1.27
SSU72-203ENST00000378725 HIRAP54198 1017 aaPredicted RBP22.95■■□□□ 1.26
SSU72-203ENST00000378725 GRIK5Q16478 980 aa22.95■■□□□ 1.26
SSU72-203ENST00000378725 ANKRD45Q5TZF3 282 aa22.95■■□□□ 1.26
SSU72-203ENST00000378725 HDAC9Q9UKV0 1011 aa22.95■■□□□ 1.26
SSU72-203ENST00000378725 TOMM70O94826 608 aa22.94■■□□□ 1.26
SSU72-203ENST00000378725 EGFRP00533 1210 aa22.94■■□□□ 1.26
SSU72-203ENST00000378725 C16orf71Q8IYS4 520 aaPredicted RBP22.94■■□□□ 1.26
SSU72-203ENST00000378725 TRPM4Q8TD43 1214 aa22.94■■□□□ 1.26
SSU72-203ENST00000378725 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.94■■□□□ 1.26
SSU72-203ENST00000378725 MRIQ9BWK5 157 aa22.94■■□□□ 1.26
SSU72-203ENST00000378725 MYOZ2Q9NPC6 264 aa22.94■■□□□ 1.26
SSU72-203ENST00000378725 POTEIP0CG38 1075 aa22.93■■□□□ 1.26
SSU72-203ENST00000378725 POTEJP0CG39 1038 aa22.93■■□□□ 1.26
SSU72-203ENST00000378725 TBC1D10BQ4KMP7 808 aaPredicted RBP22.93■■□□□ 1.26
SSU72-203ENST00000378725 PI16Q6UXB8 463 aa22.93■■□□□ 1.26
SSU72-203ENST00000378725 ZGPATQ8N5A5 531 aaKnown RBP22.93■■□□□ 1.26
SSU72-203ENST00000378725 PGAP2Q9UHJ9 254 aa22.93■■□□□ 1.26
SSU72-203ENST00000378725 F8W031 263 aaPredicted RBP22.92■■□□□ 1.26
SSU72-203ENST00000378725 NEFLP07196 543 aa22.92■■□□□ 1.26
SSU72-203ENST00000378725 KIF4BQ2VIQ3 1234 aa22.92■■□□□ 1.26
SSU72-203ENST00000378725 EAPPQ56P03 285 aaPredicted RBP22.92■■□□□ 1.26
SSU72-203ENST00000378725 LDHDQ86WU2 507 aa22.92■■□□□ 1.26
SSU72-203ENST00000378725 MTMR14Q8NCE2 650 aa22.92■■□□□ 1.26
SSU72-203ENST00000378725 RBM46Q8TBY0 533 aaKnown RBP22.92■■□□□ 1.26
SSU72-203ENST00000378725 ZC3H15Q8WU90 426 aaKnown RBP22.92■■□□□ 1.26
SSU72-203ENST00000378725 ZBED3Q96IU2 234 aaPredicted RBP22.92■■□□□ 1.26
SSU72-203ENST00000378725 BCL11AQ9H165 835 aa22.92■■□□□ 1.26
SSU72-203ENST00000378725 TTF2Q9UNY4 1162 aaKnown RBP22.92■■□□□ 1.26
SSU72-203ENST00000378725 ATP5JP18859 108 aa22.91■■□□□ 1.26
SSU72-203ENST00000378725 HDLBPQ00341 1268 aaKnown RBP22.91■■□□□ 1.26
SSU72-203ENST00000378725 RBM26Q5T8P6 1007 aaKnown RBP22.91■■□□□ 1.26
SSU72-203ENST00000378725 SERPINA10Q9UK55 444 aa22.91■■□□□ 1.26
SSU72-203ENST00000378725 PRDX5P30044 214 aa22.9■■□□□ 1.26
SSU72-203ENST00000378725 ZAP70P43403 619 aa22.9■■□□□ 1.26
SSU72-203ENST00000378725 NUCB1Q02818 461 aa22.9■■□□□ 1.26
SSU72-203ENST00000378725 SNRKQ9NRH2 765 aa22.9■■□□□ 1.26
SSU72-203ENST00000378725 ZBTB47Q9UFB7 747 aaPredicted RBP22.9■■□□□ 1.26
SSU72-203ENST00000378725 CYP2E1P05181 493 aaPredicted RBP22.89■■□□□ 1.25
SSU72-203ENST00000378725 LDHBP07195 334 aaKnown RBP22.89■■□□□ 1.25
SSU72-203ENST00000378725 SPTY2D1Q68D10 685 aaPredicted RBP22.89■■□□□ 1.25
SSU72-203ENST00000378725 TBC1D9Q6ZT07 1266 aa22.89■■□□□ 1.25
SSU72-203ENST00000378725 ECHDC1Q9NTX5 307 aa22.89■■□□□ 1.25
SSU72-203ENST00000378725 ADAMTSL1Q8N6G6 1762 aa22.89■■□□□ 1.25
SSU72-203ENST00000378725 MAST3O60307 1309 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms