RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 VIL1P09327 827 aaKnown RBP14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 DACT2Q5SW24 774 aa14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 ANKRD45Q5TZF3 282 aa14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 STRIP1Q5VSL9 837 aa14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 PI16Q6UXB8 463 aa14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 KIAA0825Q8IV33 1275 aa14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 GPR108Q9NPR9 543 aa14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 GNL3LQ9NVN8 582 aaKnown RBP14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 POTECB2RU33 542 aa14.4□□□□□ -0.11
DEPDC4-202ENST00000378244 IFIT2P09913 472 aaKnown RBP14.4□□□□□ -0.11
DEPDC4-202ENST00000378244 RBM26Q5T8P6 1007 aaKnown RBP14.4□□□□□ -0.11
DEPDC4-202ENST00000378244 RSBN1LQ6PCB5 846 aaPredicted RBP14.4□□□□□ -0.11
DEPDC4-202ENST00000378244 SNRKQ9NRH2 765 aa14.4□□□□□ -0.11
DEPDC4-202ENST00000378244 VEGFAP15692 232 aaPredicted RBP14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 LMOD1P29536 600 aaPredicted RBP14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 RASGRF1Q13972 1273 aa14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 CCDC158Q5M9N0 1113 aa14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 MFSD14BQ5SR56 506 aa14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 CERS5Q8N5B7 392 aa14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 CNOT7Q9UIV1 285 aaKnown RBP14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 SCARF1Q14162 830 aa14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 TTC39AQ5SRH9 613 aa14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 MICALL2Q8IY33 904 aa14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 C16orf71Q8IYS4 520 aaPredicted RBP14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 EAPPQ56P03 285 aaPredicted RBP14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 GPRC5DQ9NZD1 345 aa14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 ZBTB47Q9UFB7 747 aaPredicted RBP14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 HACL1Q9UJ83 578 aa14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 NDUFB9Q9Y6M9 179 aa14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 GRIK5Q16478 980 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 SAMD7Q7Z3H4 446 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 L3MBTL3Q96JM7 780 aaPredicted RBP14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 EGFRP00533 1210 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 POTEIP0CG38 1075 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 POTEJP0CG39 1038 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 TBC1D10BQ4KMP7 808 aaPredicted RBP14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 TSHZ3Q63HK5 1081 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 GCC1Q96CN9 775 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 ABCF2Q9UG63 623 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 IQCA1LA6NCM1 817 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 USP17L8P0C7I0 530 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 EPHX2P34913 555 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 MCAMP43121 646 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 TBC1D9Q6ZT07 1266 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 OGFOD1Q8N543 542 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 OTUD7AQ8TE49 926 aaPredicted RBP14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 HMG20BQ9P0W2 317 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 H7C1D1 291 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 SPATA5Q8NB90 893 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 AGBL3Q8NEM8 1001 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 LNPKQ9C0E8 428 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 TAF1DQ9H5J8 278 aaPredicted RBP14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 COL1A1P02452 1464 aaPredicted RBP14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 FAM205AQ6ZU69 1335 aa14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 DPF2Q92785 391 aa14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 GMLQ99445 158 aa14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 DENND2AQ9ULE3 1009 aa14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 RPS12P25398 132 aaKnown RBP14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 SMC5Q8IY18 1101 aa14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 TTF2Q9UNY4 1162 aaKnown RBP14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 CLEC11AQ9Y240 323 aa14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 KIF3CO14782 793 aa14.34□□□□□ -0.11
DEPDC4-202ENST00000378244 PRDX5P30044 214 aa14.34□□□□□ -0.11
DEPDC4-202ENST00000378244 TRPM4Q8TD43 1214 aa14.34□□□□□ -0.11
DEPDC4-202ENST00000378244 UQCRFS1P1P0C7P4 283 aa14.33□□□□□ -0.11
DEPDC4-202ENST00000378244 ARID4AP29374 1257 aaPredicted RBP14.33□□□□□ -0.11
DEPDC4-202ENST00000378244 RBM5P52756 815 aaKnown RBP eCLIP14.33□□□□□ -0.11
DEPDC4-202ENST00000378244 WDR66Q8TBY9 1149 aa14.33□□□□□ -0.11
DEPDC4-202ENST00000378244 PCDHAC2Q9Y5I4 1007 aa14.33□□□□□ -0.11
DEPDC4-202ENST00000378244 MYO3BQ8WXR4 1341 aa14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 SEMA3EO15041 775 aa14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 ZAP70P43403 619 aa14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 TBC1D22AQ8WUA7 517 aa14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 DNAJC2Q99543 621 aaKnown RBP14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 BOLA2Q9H3K6 86 aa14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 ADARB2Q9NS39 739 aaKnown RBP14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 HIRAP54198 1017 aaPredicted RBP14.32□□□□□ -0.12
DEPDC4-202ENST00000378244 CCDC136Q96JN2 1154 aa14.32□□□□□ -0.12
DEPDC4-202ENST00000378244 MYOZ2Q9NPC6 264 aa14.32□□□□□ -0.12
DEPDC4-202ENST00000378244 SCAF8Q9UPN6 1271 aaKnown RBP14.32□□□□□ -0.12
DEPDC4-202ENST00000378244 EDC3Q96F86 508 aaKnown RBP14.32□□□□□ -0.12
DEPDC4-202ENST00000378244 DIXDC1Q155Q3 683 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 KIF4BQ2VIQ3 1234 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 NBPF9Q3BBW0 867 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 CHD1LQ86WJ1 897 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 ANTXR1Q9H6X2 564 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 LRP2BPQ9P2M1 347 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 HDAC9Q9UKV0 1011 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 ASTN2O75129 1339 aaPredicted RBP14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 CYP2E1P05181 493 aaPredicted RBP14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 LDHBP07195 334 aaKnown RBP14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 PNMA8AQ86V59 439 aaPredicted RBP14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 ECHDC1Q9NTX5 307 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 ZNF280AP59817 542 aaPredicted RBP14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 NUCB1Q02818 461 aa14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 MAP1SQ66K74 1059 aaPredicted RBP14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 RAI14Q9P0K7 980 aa14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 WDR90Q96KV7 1748 aa14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 GOLIM4O00461 696 aa14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 MAP4K4O95819 1239 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms