RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 KDM6AO15550 1401 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA1-201ENST00000378105 PES1O00541 588 aaKnown RBP12.58□□□□□ -0.39
PCDHGA1-201ENST00000378105 CPLX1O14810 134 aa12.58□□□□□ -0.39
PCDHGA1-201ENST00000378105 MX1P20591 662 aa12.58□□□□□ -0.39
PCDHGA1-201ENST00000378105 SNX1Q13596 522 aa12.58□□□□□ -0.39
PCDHGA1-201ENST00000378105 CCDC24Q8N4L8 307 aa12.58□□□□□ -0.39
PCDHGA1-201ENST00000378105 ANKIB1Q9P2G1 1089 aa12.58□□□□□ -0.39
PCDHGA1-201ENST00000378105 AXIN2Q9Y2T1 843 aa12.58□□□□□ -0.39
PCDHGA1-201ENST00000378105 RRP15Q9Y3B9 282 aaKnown RBP12.58□□□□□ -0.39
PCDHGA1-201ENST00000378105 H3BQV1 296 aa12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 KCNQ4P56696 695 aa12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 ZSCAN26Q16670 478 aa12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 IFFO2Q5TF58 517 aa12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 SYNE3Q6ZMZ3 975 aa12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 SLC52A2Q9HAB3 445 aa12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 RTL1A6NKG5 1358 aa12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 GNL3LQ9NVN8 582 aaKnown RBP12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 TFCP2L1Q9NZI6 479 aa12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 KIF24Q5T7B8 1368 aa12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 HEG1Q9ULI3 1381 aa12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 LRRC37AA6NMS7 1700 aa12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 CRB1P82279 1406 aa12.58□□□□□ -0.4
PCDHGA1-201ENST00000378105 GRM8O00222 908 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 INHBEP58166 350 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 CHAMP1Q96JM3 812 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 LRP2BPQ9P2M1 347 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 STK24Q9Y6E0 443 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 GNPATO15228 680 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 ZSCAN23Q3MJ62 389 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 IQSEC3Q9UPP2 1182 aaPredicted RBP12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 USP16Q9Y5T5 823 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 SSFA2P28290 1259 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 ST5P78524 1137 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 JMYQ8N9B5 988 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 ZCCHC17Q9NP64 241 aaKnown RBP12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 RGS12O14924 1447 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 ANKRD18BA2A2Z9 1011 aa12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 SKOR2Q2VWA4 1001 aaPredicted RBP12.57□□□□□ -0.4
PCDHGA1-201ENST00000378105 ERBB3P21860 1342 aa12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 VPS37CA5D8V6 355 aaPredicted RBP12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 PHKG2P15735 406 aa12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 AKAP17AQ02040 695 aaKnown RBP12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 TRMT2AQ8IZ69 625 aaKnown RBP12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 C16orf45Q96MC5 204 aaPredicted RBP12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 MORC2Q9Y6X9 1032 aaPredicted RBP12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 NUP98P52948 1817 aa12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 FAM89AQ96GI7 184 aa12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 DDX21Q9NR30 783 aaKnown RBP eCLIP12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 GOLGA6CA6NDK9 693 aa12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 GOLGA6BA6NDN3 693 aa12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 GOLGA6DP0CG33 693 aa12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 GOLGA6AQ9NYA3 693 aa12.56□□□□□ -0.4
PCDHGA1-201ENST00000378105 LAMA3Q16787 3333 aa12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 MCM5P33992 734 aa12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 TRIM74Q86UV6 250 aa12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 TRIM73Q86UV7 250 aa12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 LINS1Q8NG48 757 aa12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 ARHGAP45Q92619 1136 aa12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 CCNL1Q9UK58 526 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 C16orf71Q8IYS4 520 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 RPGRQ92834 1020 aaKnown RBP12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 ZNF232Q9UNY5 417 aa12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 MRFAP1Q9Y605 127 aa12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 SKAP2O75563 359 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 IFIT1P09914 478 aaKnown RBP12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 PEX19P40855 299 aa12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 SETDB2Q96T68 719 aa12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 RTCBQ9Y3I0 505 aaKnown RBP12.55□□□□□ -0.4
PCDHGA1-201ENST00000378105 MECOMQ03112 1051 aa12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 OVOS2A0A0G2JMS6 1433 aa12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 ARAP2Q8WZ64 1704 aa12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 KLHL33A6NCF5 533 aa12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 MTA1Q13330 715 aa12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 CPLX2Q6PUV4 134 aaKnown RBP12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 GET4Q7L5D6 327 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 LIG1P18858 919 aa12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 KIRREL3Q8IZU9 778 aa12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 RASSF8Q8NHQ8 419 aa12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 MRFAP1L1Q96HT8 127 aa12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 PDLIM2Q96JY6 352 aa12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 COL11A2P13942 1736 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA1-201ENST00000378105 EIF4A1P60842 406 aaKnown RBP12.53□□□□□ -0.4
PCDHGA1-201ENST00000378105 AP1ARQ63HQ0 302 aa12.53□□□□□ -0.4
PCDHGA1-201ENST00000378105 KLHDC4Q8TBB5 520 aa12.53□□□□□ -0.4
PCDHGA1-201ENST00000378105 LRP5O75197 1615 aa12.53□□□□□ -0.4
PCDHGA1-201ENST00000378105 ERICH2A1L162 156 aa12.53□□□□□ -0.4
PCDHGA1-201ENST00000378105 GLRX3O76003 335 aaKnown RBP12.53□□□□□ -0.4
PCDHGA1-201ENST00000378105 KMT5BQ4FZB7 885 aa12.53□□□□□ -0.4
PCDHGA1-201ENST00000378105 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.53□□□□□ -0.4
PCDHGA1-201ENST00000378105 QTRT2Q9H974 415 aaKnown RBP12.53□□□□□ -0.4
PCDHGA1-201ENST00000378105 ASAP1Q9ULH1 1129 aa12.53□□□□□ -0.4
PCDHGA1-201ENST00000378105 PRAMEF22A3QJZ6 481 aa12.53□□□□□ -0.4
PCDHGA1-201ENST00000378105 NOM1Q5C9Z4 860 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms