RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 TTC22Q5TAA0 569 aa26■■□□□ 1.75
CBWD3-202ENST00000377342 HMG20BQ9P0W2 317 aa26■■□□□ 1.75
CBWD3-202ENST00000377342 MYH7P12883 1935 aa25.99■■□□□ 1.75
CBWD3-202ENST00000377342 ERC2O15083 957 aa25.99■■□□□ 1.75
CBWD3-202ENST00000377342 GPR162Q16538 588 aa25.99■■□□□ 1.75
CBWD3-202ENST00000377342 LARGE2Q8N3Y3 721 aa25.99■■□□□ 1.75
CBWD3-202ENST00000377342 HAUS7Q99871 368 aa25.99■■□□□ 1.75
CBWD3-202ENST00000377342 SNRKQ9NRH2 765 aa25.99■■□□□ 1.75
CBWD3-202ENST00000377342 GNL3LQ9NVN8 582 aaKnown RBP25.99■■□□□ 1.75
CBWD3-202ENST00000377342 SEMA3EO15041 775 aa25.98■■□□□ 1.75
CBWD3-202ENST00000377342 ECE2O60344 883 aa25.98■■□□□ 1.75
CBWD3-202ENST00000377342 PDS5AQ29RF7 1337 aaKnown RBP25.97■■□□□ 1.75
CBWD3-202ENST00000377342 YDJCA8MPS7 323 aa25.97■■□□□ 1.75
CBWD3-202ENST00000377342 SPATA5Q8NB90 893 aa25.97■■□□□ 1.75
CBWD3-202ENST00000377342 EDC3Q96F86 508 aaKnown RBP25.97■■□□□ 1.75
CBWD3-202ENST00000377342 MAST2Q6P0Q8 1798 aa25.97■■□□□ 1.75
CBWD3-202ENST00000377342 ZAP70P43403 619 aa25.96■■□□□ 1.75
CBWD3-202ENST00000377342 MAP4K4O95819 1239 aaPredicted RBP25.96■■□□□ 1.75
CBWD3-202ENST00000377342 DNAJC2Q99543 621 aaKnown RBP25.96■■□□□ 1.75
CBWD3-202ENST00000377342 PODNQ7Z5L7 613 aa25.95■■□□□ 1.74
CBWD3-202ENST00000377342 DENND2AQ9ULE3 1009 aa25.95■■□□□ 1.74
CBWD3-202ENST00000377342 JAG2Q9Y219 1238 aa25.95■■□□□ 1.74
CBWD3-202ENST00000377342 ANTXR1Q9H6X2 564 aa25.94■■□□□ 1.74
CBWD3-202ENST00000377342 KCNQ5Q9NR82 932 aa25.94■■□□□ 1.74
CBWD3-202ENST00000377342 CYP2E1P05181 493 aaPredicted RBP25.93■■□□□ 1.74
CBWD3-202ENST00000377342 FAM205AQ6ZU69 1335 aa25.93■■□□□ 1.74
CBWD3-202ENST00000377342 G3V3G9 751 aa25.93■■□□□ 1.74
CBWD3-202ENST00000377342 FRAT2O75474 233 aaPredicted RBP25.93■■□□□ 1.74
CBWD3-202ENST00000377342 LMNB1P20700 586 aa25.93■■□□□ 1.74
CBWD3-202ENST00000377342 CHAF1AQ13111 956 aaPredicted RBP25.93■■□□□ 1.74
CBWD3-202ENST00000377342 BMP2KLQ5H9B9 411 aa25.93■■□□□ 1.74
CBWD3-202ENST00000377342 DCAF8Q5TAQ9 597 aa25.93■■□□□ 1.74
CBWD3-202ENST00000377342 NIM1KQ8IY84 436 aa25.93■■□□□ 1.74
CBWD3-202ENST00000377342 PAG1Q9NWQ8 432 aa25.93■■□□□ 1.74
CBWD3-202ENST00000377342 GOLIM4O00461 696 aa25.92■■□□□ 1.74
CBWD3-202ENST00000377342 GRIN3BO60391 1043 aa25.92■■□□□ 1.74
CBWD3-202ENST00000377342 PIH1D3Q9NQM4 214 aaKnown RBP25.91■■□□□ 1.74
CBWD3-202ENST00000377342 ZNRF3Q9ULT6 936 aa25.91■■□□□ 1.74
CBWD3-202ENST00000377342 SDSP20132 328 aa25.9■■□□□ 1.74
CBWD3-202ENST00000377342 GTF2IP78347 998 aa25.9■■□□□ 1.74
CBWD3-202ENST00000377342 SALL1Q9NSC2 1324 aa25.9■■□□□ 1.74
CBWD3-202ENST00000377342 TBC1D9Q6ZT07 1266 aa25.9■■□□□ 1.74
CBWD3-202ENST00000377342 JDP2Q8WYK2 163 aa25.89■■□□□ 1.73
CBWD3-202ENST00000377342 ADAMTSL1Q8N6G6 1762 aa25.88■■□□□ 1.73
CBWD3-202ENST00000377342 CERS5Q8N5B7 392 aa25.88■■□□□ 1.73
CBWD3-202ENST00000377342 TRIM6-TRIM34B2RNG4 842 aa25.87■■□□□ 1.73
CBWD3-202ENST00000377342 FZD9O00144 591 aa25.87■■□□□ 1.73
CBWD3-202ENST00000377342 GRIK5Q16478 980 aa25.87■■□□□ 1.73
CBWD3-202ENST00000377342 DACT2Q5SW24 774 aa25.87■■□□□ 1.73
CBWD3-202ENST00000377342 STRIP1Q5VSL9 837 aa25.87■■□□□ 1.73
CBWD3-202ENST00000377342 WDR66Q8TBY9 1149 aa25.87■■□□□ 1.73
CBWD3-202ENST00000377342 EVI5LQ96CN4 794 aa25.87■■□□□ 1.73
CBWD3-202ENST00000377342 MXD3Q9BW11 206 aa25.87■■□□□ 1.73
CBWD3-202ENST00000377342 TTLL5Q6EMB2 1281 aa25.87■■□□□ 1.73
CBWD3-202ENST00000377342 CNTROBQ8N137 903 aa25.87■■□□□ 1.73
CBWD3-202ENST00000377342 RNF181Q9P0P0 153 aa25.87■■□□□ 1.73
CBWD3-202ENST00000377342 USP17L3A6NCW0 530 aa25.86■■□□□ 1.73
CBWD3-202ENST00000377342 USP17L4A6NCW7 530 aa25.86■■□□□ 1.73
CBWD3-202ENST00000377342 RAD17O75943 681 aa25.86■■□□□ 1.73
CBWD3-202ENST00000377342 MFSD14BQ5SR56 506 aa25.86■■□□□ 1.73
CBWD3-202ENST00000377342 USP17L1Q7RTZ2 530 aa25.86■■□□□ 1.73
CBWD3-202ENST00000377342 KBTBD3Q8NAB2 608 aa25.86■■□□□ 1.73
CBWD3-202ENST00000377342 FBXW7Q969H0 707 aa25.86■■□□□ 1.73
CBWD3-202ENST00000377342 RILPL2Q969X0 211 aa25.86■■□□□ 1.73
CBWD3-202ENST00000377342 ZNF541Q9H0D2 1346 aa25.86■■□□□ 1.73
CBWD3-202ENST00000377342 PRDX5P30044 214 aa25.85■■□□□ 1.73
CBWD3-202ENST00000377342 CXCL9Q07325 125 aa25.85■■□□□ 1.73
CBWD3-202ENST00000377342 TTF1Q15361 905 aaPredicted RBP25.85■■□□□ 1.73
CBWD3-202ENST00000377342 C9orf131Q5VYM1 1079 aa25.85■■□□□ 1.73
CBWD3-202ENST00000377342 TBC1D22AQ8WUA7 517 aa25.84■■□□□ 1.73
CBWD3-202ENST00000377342 ABCF2Q9UG63 623 aa25.84■■□□□ 1.73
CBWD3-202ENST00000377342 RFX7Q2KHR2 1363 aa25.84■■□□□ 1.73
CBWD3-202ENST00000377342 MYH2Q9UKX2 1941 aa25.84■■□□□ 1.73
CBWD3-202ENST00000377342 PSMD14O00487 310 aa25.83■■□□□ 1.73
CBWD3-202ENST00000377342 FSD1Q9BTV5 496 aa25.83■■□□□ 1.73
CBWD3-202ENST00000377342 CHGBP05060 677 aa25.83■■□□□ 1.73
CBWD3-202ENST00000377342 FKBP1AP62942 108 aaKnown RBP25.83■■□□□ 1.73
CBWD3-202ENST00000377342 ZNF384Q8TF68 577 aa25.83■■□□□ 1.73
CBWD3-202ENST00000377342 IDH1O75874 414 aaKnown RBP25.81■■□□□ 1.72
CBWD3-202ENST00000377342 VIL1P09327 827 aaKnown RBP25.81■■□□□ 1.72
CBWD3-202ENST00000377342 ZGPATQ8N5A5 531 aaKnown RBP25.81■■□□□ 1.72
CBWD3-202ENST00000377342 CIAPIN1Q6FI81 312 aa25.8■■□□□ 1.72
CBWD3-202ENST00000377342 LRP2BPQ9P2M1 347 aa25.8■■□□□ 1.72
CBWD3-202ENST00000377342 SLFNL1Q499Z3 407 aa25.8■■□□□ 1.72
CBWD3-202ENST00000377342 RSBN1LQ6PCB5 846 aaPredicted RBP25.8■■□□□ 1.72
CBWD3-202ENST00000377342 GMLQ99445 158 aa25.8■■□□□ 1.72
CBWD3-202ENST00000377342 EIF6P56537 245 aaKnown RBP25.79■■□□□ 1.72
CBWD3-202ENST00000377342 ERICH6Q7L0X2 663 aa25.79■■□□□ 1.72
CBWD3-202ENST00000377342 LDHBP07195 334 aaKnown RBP25.78■■□□□ 1.72
CBWD3-202ENST00000377342 PDE6AP16499 860 aa25.78■■□□□ 1.72
CBWD3-202ENST00000377342 MECOMQ03112 1051 aa25.78■■□□□ 1.72
CBWD3-202ENST00000377342 NSUN4Q96CB9 384 aaKnown RBP25.78■■□□□ 1.72
CBWD3-202ENST00000377342 RAI14Q9P0K7 980 aa25.78■■□□□ 1.72
CBWD3-202ENST00000377342 SUGT1Q9Y2Z0 365 aa25.78■■□□□ 1.72
CBWD3-202ENST00000377342 MYO3BQ8WXR4 1341 aa25.78■■□□□ 1.72
CBWD3-202ENST00000377342 TCRBV5S4A2TA0A5A2 114 aa25.77■■□□□ 1.72
CBWD3-202ENST00000377342 ADD2P35612 726 aa25.77■■□□□ 1.72
CBWD3-202ENST00000377342 MAP3K12Q12852 859 aa25.77■■□□□ 1.72
CBWD3-202ENST00000377342 SPTY2D1Q68D10 685 aaPredicted RBP25.77■■□□□ 1.72
CBWD3-202ENST00000377342 ZBTB12Q9Y330 459 aaPredicted RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms