RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 DTNBO60941 627 aa9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 CPA1P15085 419 aa9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 PI16Q6UXB8 463 aa9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 TTLL11Q8NHH1 800 aa9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 SASS6Q6UVJ0 657 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 TBC1D22AQ8WUA7 517 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 WASF1Q92558 559 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 PICK1Q9NRD5 415 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 LIMCH1Q9UPQ0 1083 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 CCDC93Q567U6 631 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 SULF1Q8IWU6 871 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 LINC00116Q8NCU8 138 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 SSH3Q8TE77 659 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 KRT23Q9C075 422 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 BIN2Q9UBW5 565 aaPredicted RBP9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 XDHP47989 1333 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 RICTORQ6R327 1708 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 GOLGA6L3A6NEY3 463 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 ZBTB43O43298 467 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 IGKV5-2P06315 115 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 SSRP1Q08945 709 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 JMYQ8N9B5 988 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 CELF1Q92879 486 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 PRC1O43663 620 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 NPR1P16066 1061 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 RNF214Q8ND24 703 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 MASTLQ96GX5 879 aa9.87□□□□□ -0.83
CRNKL1-202ENST00000377340 B4E1Z4 1266 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 SCLT1Q96NL6 688 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 BEGAINQ9BUH8 593 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 QRICH2Q9H0J4 1663 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 GNAT2P19087 354 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 CHMLP26374 656 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 KRT85P78386 507 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 EPHA10Q5JZY3 1008 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 KBTBD3Q8NAB2 608 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 SDR42E1Q8WUS8 393 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 APPBP2Q92624 585 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 ABCC4O15439 1325 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 CPXCR1Q8N123 301 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 VTI1AQ96AJ9 217 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 PANK2Q9BZ23 570 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 TAOK3Q9H2K8 898 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 SAMM50Q9Y512 469 aa9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 WDR33Q9C0J8 1336 aaKnown RBP9.86□□□□□ -0.83
CRNKL1-202ENST00000377340 TPM2P07951 284 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 ADRA2BP18089 450 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 TSR1Q2NL82 804 aaKnown RBP9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 HEATR3Q7Z4Q2 680 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 SEC62Q99442 399 aaKnown RBP9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 ZNF277Q9NRM2 450 aaPredicted RBP9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 TFIP11Q9UBB9 837 aaKnown RBP9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 MAST3O60307 1309 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 CCDC171Q6TFL3 1326 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 USP17L12C9JPN9 530 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 USP17L21D6R901 530 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 SSFA2P28290 1259 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 Q6ZUG5 572 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 GPCPD1Q9NPB8 672 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 UBE4AQ14139 1066 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 SLC15A2Q16348 729 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 ANKRD20A12PQ8NF67 263 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 DCPSQ96C86 337 aaKnown RBP9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 CNNM2Q9H8M5 875 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 TLR7Q9NYK1 1049 aaKnown RBP9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 HMG20BQ9P0W2 317 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 ZC3H13Q5T200 1668 aaKnown RBP9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 GRAPQ13588 217 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 GRAPLQ8TC17 118 aaPredicted RBP9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 COPRSQ9NQ92 184 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 RNF181Q9P0P0 153 aa9.85□□□□□ -0.83
CRNKL1-202ENST00000377340 IQSEC2Q5JU85 1478 aa9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 RTN1Q16799 776 aa9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 CAVIN1Q6NZI2 390 aaKnown RBP9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 SPATA32Q96LK8 384 aa9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 CTDSPL2Q05D32 466 aa9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 DIXDC1Q155Q3 683 aa9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 DBNLQ9UJU6 430 aaKnown RBP9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 BCORL1Q5H9F3 1711 aa9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 TMEM131LA2VDJ0 1609 aa9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 MSNP26038 577 aaKnown RBP9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 SP4Q02446 784 aa9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 TNIP1Q15025 636 aa9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 TANGO6Q9C0B7 1094 aa9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 LEMD3Q9Y2U8 911 aa9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 SETBP1Q9Y6X0 1596 aa9.84□□□□□ -0.83
CRNKL1-202ENST00000377340 LIG1P18858 919 aa9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 EIF5P55010 431 aaKnown RBP9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 BRPF1P55201 1214 aaPredicted RBP9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 APOBRQ0VD83 1088 aa9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 CREB3L3Q68CJ9 461 aa9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 CEP89Q96ST8 783 aa9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 FAM47AQ5JRC9 791 aa9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 PTPN12Q05209 780 aaKnown RBP9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 SKOR2Q2VWA4 1001 aaPredicted RBP9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 FNBP4Q8N3X1 1017 aaPredicted RBP9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 SH2B1Q9NRF2 756 aaPredicted RBP9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 DLC1Q96QB1 1528 aa9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 PDE6AP16499 860 aa9.83□□□□□ -0.84
CRNKL1-202ENST00000377340 EPS15P42566 896 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms