RNA–Protein interactions for RNA: ENST00000377031.7

C9orf85-203, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3 BASIC

Gene C9orf85, Length 1,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-203ENST00000377031 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
C9orf85-203ENST00000377031 DDX46Q7L014 1031 aaKnown RBP12.88□□□□□ -0.35
C9orf85-203ENST00000377031 SP8Q8IXZ3 490 aa12.88□□□□□ -0.35
C9orf85-203ENST00000377031 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
C9orf85-203ENST00000377031 MYH3P11055 1940 aa12.88□□□□□ -0.35
C9orf85-203ENST00000377031 TIAM2Q8IVF5 1701 aa12.88□□□□□ -0.35
C9orf85-203ENST00000377031 PPEF1O14829 653 aaPredicted RBP12.87□□□□□ -0.35
C9orf85-203ENST00000377031 ALDH1L1O75891 902 aa12.87□□□□□ -0.35
C9orf85-203ENST00000377031 RASSF7Q02833 373 aa12.87□□□□□ -0.35
C9orf85-203ENST00000377031 CWF19L2Q2TBE0 894 aaKnown RBP12.87□□□□□ -0.35
C9orf85-203ENST00000377031 RBM46Q8TBY0 533 aaKnown RBP12.87□□□□□ -0.35
C9orf85-203ENST00000377031 RTFDC1Q9BY42 306 aaPredicted RBP12.87□□□□□ -0.35
C9orf85-203ENST00000377031 RNF181Q9P0P0 153 aa12.87□□□□□ -0.35
C9orf85-203ENST00000377031 RCCD1A6NED2 376 aa12.86□□□□□ -0.35
C9orf85-203ENST00000377031 HNRNPUQ00839 825 aaKnown RBP eCLIP12.86□□□□□ -0.35
C9orf85-203ENST00000377031 V9GY48 417 aaPredicted RBP12.86□□□□□ -0.35
C9orf85-203ENST00000377031 UTYO14607 1347 aa12.86□□□□□ -0.35
C9orf85-203ENST00000377031 LTBP1Q14766 1721 aa12.85□□□□□ -0.35
C9orf85-203ENST00000377031 F6X3S4 739 aa12.85□□□□□ -0.35
C9orf85-203ENST00000377031 CSF1RP07333 972 aa12.85□□□□□ -0.35
C9orf85-203ENST00000377031 CCDC152Q4G0S7 254 aa12.85□□□□□ -0.35
C9orf85-203ENST00000377031 BLOC1S3Q6QNY0 202 aa12.85□□□□□ -0.35
C9orf85-203ENST00000377031 TAF1P21675 1872 aa12.85□□□□□ -0.35
C9orf85-203ENST00000377031 GFRA3O60609 400 aa12.84□□□□□ -0.35
C9orf85-203ENST00000377031 RARSP54136 660 aaKnown RBP12.84□□□□□ -0.35
C9orf85-203ENST00000377031 CTSWP56202 376 aa12.84□□□□□ -0.35
C9orf85-203ENST00000377031 TTLL11Q8NHH1 800 aa12.84□□□□□ -0.35
C9orf85-203ENST00000377031 ARHGAP45Q92619 1136 aa12.84□□□□□ -0.35
C9orf85-203ENST00000377031 PCDHB3Q9Y5E6 796 aa12.84□□□□□ -0.35
C9orf85-203ENST00000377031 COL4A1P02462 1669 aa12.83□□□□□ -0.35
C9orf85-203ENST00000377031 WDR90Q96KV7 1748 aa12.83□□□□□ -0.36
C9orf85-203ENST00000377031 DUOX1Q9NRD9 1551 aa12.83□□□□□ -0.36
C9orf85-203ENST00000377031 GLTPD2A6NH11 291 aa12.83□□□□□ -0.36
C9orf85-203ENST00000377031 IARSP41252 1262 aaKnown RBP12.83□□□□□ -0.36
C9orf85-203ENST00000377031 RPS8P62241 208 aaKnown RBP12.83□□□□□ -0.36
C9orf85-203ENST00000377031 LAPTM4AQ15012 233 aa12.83□□□□□ -0.36
C9orf85-203ENST00000377031 OLFM4Q6UX06 510 aa12.83□□□□□ -0.36
C9orf85-203ENST00000377031 UBE3BQ7Z3V4 1068 aa12.83□□□□□ -0.36
C9orf85-203ENST00000377031 SUPT20HQ8NEM7 779 aa12.83□□□□□ -0.36
C9orf85-203ENST00000377031 CELF1Q92879 486 aaKnown RBP12.83□□□□□ -0.36
C9orf85-203ENST00000377031 SRCIN1Q9C0H9 1055 aa12.83□□□□□ -0.36
C9orf85-203ENST00000377031 TMX4Q9H1E5 349 aaPredicted RBP12.83□□□□□ -0.36
C9orf85-203ENST00000377031 GPBP1L1Q9HC44 474 aaPredicted RBP12.83□□□□□ -0.36
C9orf85-203ENST00000377031 KDM2BQ8NHM5 1336 aa12.83□□□□□ -0.36
C9orf85-203ENST00000377031 FZD9O00144 591 aa12.82□□□□□ -0.36
C9orf85-203ENST00000377031 GRM8O00222 908 aa12.82□□□□□ -0.36
C9orf85-203ENST00000377031 RTL5Q5HYW3 569 aaPredicted RBP12.82□□□□□ -0.36
C9orf85-203ENST00000377031 YTHDC1Q96MU7 727 aaKnown RBP12.82□□□□□ -0.36
C9orf85-203ENST00000377031 ANP32EQ9BTT0 268 aa12.82□□□□□ -0.36
C9orf85-203ENST00000377031 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
C9orf85-203ENST00000377031 PODXL2Q9NZ53 605 aa12.82□□□□□ -0.36
C9orf85-203ENST00000377031 TESPA1A2RU30 521 aaPredicted RBP12.81□□□□□ -0.36
C9orf85-203ENST00000377031 SLC10A3P09131 477 aa12.81□□□□□ -0.36
C9orf85-203ENST00000377031 SLC4A3P48751 1232 aa12.81□□□□□ -0.36
C9orf85-203ENST00000377031 MPNDQ8N594 471 aa12.81□□□□□ -0.36
C9orf85-203ENST00000377031 CDC5LQ99459 802 aaKnown RBP12.81□□□□□ -0.36
C9orf85-203ENST00000377031 PRR14Q9BWN1 585 aa12.81□□□□□ -0.36
C9orf85-203ENST00000377031 KIF16BQ96L93 1317 aa12.81□□□□□ -0.36
C9orf85-203ENST00000377031 FOXO4P98177 505 aa12.8□□□□□ -0.36
C9orf85-203ENST00000377031 PXYLP1Q8TE99 480 aa12.8□□□□□ -0.36
C9orf85-203ENST00000377031 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
C9orf85-203ENST00000377031 EMID1Q96A84 441 aaPredicted RBP12.8□□□□□ -0.36
C9orf85-203ENST00000377031 API5Q9BZZ5 524 aaKnown RBP12.8□□□□□ -0.36
C9orf85-203ENST00000377031 SEC31BQ9NQW1 1179 aa12.8□□□□□ -0.36
C9orf85-203ENST00000377031 ZNF277Q9NRM2 450 aaPredicted RBP12.8□□□□□ -0.36
C9orf85-203ENST00000377031 BSDC1Q9NW68 430 aaPredicted RBP12.8□□□□□ -0.36
C9orf85-203ENST00000377031 COL4A5P29400 1685 aa12.8□□□□□ -0.36
C9orf85-203ENST00000377031 ACTN4O43707 911 aaKnown RBP12.79□□□□□ -0.36
C9orf85-203ENST00000377031 TLL1O43897 1013 aa12.79□□□□□ -0.36
C9orf85-203ENST00000377031 PLCB2Q00722 1185 aa12.79□□□□□ -0.36
C9orf85-203ENST00000377031 KIAA2012Q0VF49 1180 aa12.79□□□□□ -0.36
C9orf85-203ENST00000377031 DPP8Q6V1X1 898 aaPredicted RBP12.79□□□□□ -0.36
C9orf85-203ENST00000377031 ANKRD18AQ8IVF6 992 aa12.79□□□□□ -0.36
C9orf85-203ENST00000377031 TMUB1Q9BVT8 246 aa12.79□□□□□ -0.36
C9orf85-203ENST00000377031 BCL2L13Q9BXK5 485 aa12.79□□□□□ -0.36
C9orf85-203ENST00000377031 GREM2Q9H772 168 aa12.79□□□□□ -0.36
C9orf85-203ENST00000377031 NOB1Q9ULX3 412 aaKnown RBP12.79□□□□□ -0.36
C9orf85-203ENST00000377031 GPR37O15354 613 aa12.78□□□□□ -0.36
C9orf85-203ENST00000377031 CCT4P50991 539 aaKnown RBP12.78□□□□□ -0.36
C9orf85-203ENST00000377031 RABL6Q3YEC7 729 aaPredicted RBP12.78□□□□□ -0.36
C9orf85-203ENST00000377031 RBM26Q5T8P6 1007 aaKnown RBP12.78□□□□□ -0.36
C9orf85-203ENST00000377031 SLC4A10Q6U841 1118 aa12.78□□□□□ -0.36
C9orf85-203ENST00000377031 SLC51AQ86UW1 340 aa12.78□□□□□ -0.36
C9orf85-203ENST00000377031 JDP2Q8WYK2 163 aa12.78□□□□□ -0.36
C9orf85-203ENST00000377031 KAZALD1Q96I82 304 aa12.78□□□□□ -0.36
C9orf85-203ENST00000377031 USP44Q9H0E7 712 aa12.78□□□□□ -0.36
C9orf85-203ENST00000377031 C9orf78Q9NZ63 289 aaPredicted RBP12.78□□□□□ -0.36
C9orf85-203ENST00000377031 SCN4AP35499 1836 aa12.78□□□□□ -0.36
C9orf85-203ENST00000377031 POTECB2RU33 542 aa12.77□□□□□ -0.37
C9orf85-203ENST00000377031 NRG2O14511 850 aaPredicted RBP12.77□□□□□ -0.37
C9orf85-203ENST00000377031 IPO8O15397 1037 aaKnown RBP12.77□□□□□ -0.37
C9orf85-203ENST00000377031 CFHP08603 1231 aa12.77□□□□□ -0.37
C9orf85-203ENST00000377031 NBPF7P0C2Y1 421 aaPredicted RBP12.77□□□□□ -0.37
C9orf85-203ENST00000377031 ITGA6P23229 1130 aa12.77□□□□□ -0.37
C9orf85-203ENST00000377031 GPSM2P81274 684 aa12.77□□□□□ -0.37
C9orf85-203ENST00000377031 INTS3Q68E01 1043 aaKnown RBP12.77□□□□□ -0.37
C9orf85-203ENST00000377031 RNF223E7ERA6 249 aa12.76□□□□□ -0.37
C9orf85-203ENST00000377031 TOMM70O94826 608 aa12.76□□□□□ -0.37
C9orf85-203ENST00000377031 VEGFAP15692 232 aaPredicted RBP12.76□□□□□ -0.37
C9orf85-203ENST00000377031 FECHP22830 423 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms