RNA–Protein interactions for RNA: ENST00000376800.7

HCG9-201, Transcript of HLA complex group 9, humanhuman

TSL 1 (best) BASIC

Gene HCG9, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG9-201ENST00000376800 ZNF804AQ7Z570 1209 aa17.05■□□□□ 0.32
HCG9-201ENST00000376800 OGFOD1Q8N543 542 aa17.05■□□□□ 0.32
HCG9-201ENST00000376800 ZBED3Q96IU2 234 aaPredicted RBP17.05■□□□□ 0.32
HCG9-201ENST00000376800 IQSEC3Q9UPP2 1182 aaPredicted RBP17.05■□□□□ 0.32
HCG9-201ENST00000376800 ALDH1L2Q3SY69 923 aa17.04■□□□□ 0.32
HCG9-201ENST00000376800 BEGAINQ9BUH8 593 aa17.04■□□□□ 0.32
HCG9-201ENST00000376800 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
HCG9-201ENST00000376800 RIPOR2Q9Y4F9 1068 aa17.04■□□□□ 0.32
HCG9-201ENST00000376800 AKAP11Q9UKA4 1901 aa17.04■□□□□ 0.32
HCG9-201ENST00000376800 MYH13Q9UKX3 1938 aa17.04■□□□□ 0.32
HCG9-201ENST00000376800 UBE2Q2LH0YL09 131 aa17.03■□□□□ 0.32
HCG9-201ENST00000376800 SLC10A3P09131 477 aa17.03■□□□□ 0.32
HCG9-201ENST00000376800 BRPF1P55201 1214 aaPredicted RBP17.03■□□□□ 0.32
HCG9-201ENST00000376800 KIF23Q02241 960 aaPredicted RBP17.03■□□□□ 0.32
HCG9-201ENST00000376800 NOGQ13253 232 aa17.03■□□□□ 0.32
HCG9-201ENST00000376800 PRKG1Q13976 671 aa17.03■□□□□ 0.32
HCG9-201ENST00000376800 RASAL3Q86YV0 1011 aa17.03■□□□□ 0.32
HCG9-201ENST00000376800 SSC5DA1L4H1 1573 aa17.02■□□□□ 0.32
HCG9-201ENST00000376800 CLRN2A0PK11 232 aa17.02■□□□□ 0.32
HCG9-201ENST00000376800 GRIK5Q16478 980 aa17.02■□□□□ 0.32
HCG9-201ENST00000376800 FAM84BQ96KN1 310 aaPredicted RBP17.02■□□□□ 0.32
HCG9-201ENST00000376800 HDAC9Q9UKV0 1011 aa17.02■□□□□ 0.32
HCG9-201ENST00000376800 TNNQ9UQP3 1299 aa17.02■□□□□ 0.32
HCG9-201ENST00000376800 RFX5P48382 616 aaPredicted RBP17.01■□□□□ 0.31
HCG9-201ENST00000376800 UBE4AQ14139 1066 aa17.01■□□□□ 0.31
HCG9-201ENST00000376800 CFAP100Q494V2 611 aa17.01■□□□□ 0.31
HCG9-201ENST00000376800 METTL24Q5JXM2 366 aa17.01■□□□□ 0.31
HCG9-201ENST00000376800 VGLL2Q8N8G2 317 aa17.01■□□□□ 0.31
HCG9-201ENST00000376800 HIBADHP31937 336 aaKnown RBP17■□□□□ 0.31
HCG9-201ENST00000376800 TTLL12Q14166 644 aaPredicted RBP17■□□□□ 0.31
HCG9-201ENST00000376800 DLGAP5Q15398 846 aa17■□□□□ 0.31
HCG9-201ENST00000376800 MIER1Q8N108 512 aa17■□□□□ 0.31
HCG9-201ENST00000376800 TDRD7Q8NHU6 1098 aaKnown RBP17■□□□□ 0.31
HCG9-201ENST00000376800 PRMT6Q96LA8 375 aaPredicted RBP17■□□□□ 0.31
HCG9-201ENST00000376800 ZBTB4Q9P1Z0 1013 aaPredicted RBP17■□□□□ 0.31
HCG9-201ENST00000376800 OTOFQ9HC10 1997 aa17■□□□□ 0.31
HCG9-201ENST00000376800 MROH5Q6ZUA9 1318 aa16.99■□□□□ 0.31
HCG9-201ENST00000376800 RARSP54136 660 aaKnown RBP16.99■□□□□ 0.31
HCG9-201ENST00000376800 MKRN3Q13064 507 aaKnown RBP16.99■□□□□ 0.31
HCG9-201ENST00000376800 CHAF1AQ13111 956 aaPredicted RBP16.99■□□□□ 0.31
HCG9-201ENST00000376800 FAM205AQ6ZU69 1335 aa16.98■□□□□ 0.31
HCG9-201ENST00000376800 SPDYE2BA6NHP3 402 aa16.98■□□□□ 0.31
HCG9-201ENST00000376800 SPDYE6P0CI01 402 aa16.98■□□□□ 0.31
HCG9-201ENST00000376800 MFSD14BQ5SR56 506 aa16.98■□□□□ 0.31
HCG9-201ENST00000376800 APOBEC3FQ8IUX4 373 aaKnown RBP16.98■□□□□ 0.31
HCG9-201ENST00000376800 CCDC102AQ96A19 550 aa16.98■□□□□ 0.31
HCG9-201ENST00000376800 SIL1Q9H173 461 aa16.98■□□□□ 0.31
HCG9-201ENST00000376800 VEZTQ9HBM0 779 aa16.98■□□□□ 0.31
HCG9-201ENST00000376800 COL1A1P02452 1464 aaPredicted RBP16.98■□□□□ 0.31
HCG9-201ENST00000376800 PDE8BO95263 885 aa16.97■□□□□ 0.31
HCG9-201ENST00000376800 BCAMP50895 628 aa16.97■□□□□ 0.31
HCG9-201ENST00000376800 RBM5P52756 815 aaKnown RBP eCLIP16.97■□□□□ 0.31
HCG9-201ENST00000376800 PTPN12Q05209 780 aaKnown RBP16.97■□□□□ 0.31
HCG9-201ENST00000376800 CSRNP1Q96S65 589 aa16.97■□□□□ 0.31
HCG9-201ENST00000376800 MEIS3Q99687 375 aa16.97■□□□□ 0.31
HCG9-201ENST00000376800 LRRFIP2Q9Y608 721 aaKnown RBP16.97■□□□□ 0.31
HCG9-201ENST00000376800 TRPA1O75762 1119 aa16.96■□□□□ 0.31
HCG9-201ENST00000376800 UBTFL1P0CB47 393 aaPredicted RBP16.96■□□□□ 0.31
HCG9-201ENST00000376800 FKBP1AP62942 108 aaKnown RBP16.96■□□□□ 0.31
HCG9-201ENST00000376800 FKBP1BP68106 108 aa16.96■□□□□ 0.31
HCG9-201ENST00000376800 ATG9AQ7Z3C6 839 aa16.96■□□□□ 0.31
HCG9-201ENST00000376800 FBXO33Q7Z6M2 555 aa16.96■□□□□ 0.31
HCG9-201ENST00000376800 CDAN1Q8IWY9 1227 aa16.96■□□□□ 0.31
HCG9-201ENST00000376800 MTMR14Q8NCE2 650 aa16.96■□□□□ 0.31
HCG9-201ENST00000376800 ABHD8Q96I13 439 aa16.96■□□□□ 0.31
HCG9-201ENST00000376800 DEFB129Q9H1M3 183 aa16.96■□□□□ 0.31
HCG9-201ENST00000376800 RNF186Q9NXI6 227 aa16.96■□□□□ 0.31
HCG9-201ENST00000376800 TTF2Q9UNY4 1162 aaKnown RBP16.96■□□□□ 0.31
HCG9-201ENST00000376800 PA2G4Q9UQ80 394 aaKnown RBP16.96■□□□□ 0.31
HCG9-201ENST00000376800 BCAR3O75815 825 aa16.95■□□□□ 0.3
HCG9-201ENST00000376800 FGFR2P21802 821 aa16.95■□□□□ 0.3
HCG9-201ENST00000376800 ANGEL1Q9UNK9 670 aaKnown RBP16.95■□□□□ 0.3
HCG9-201ENST00000376800 EYA2O00167 538 aa16.94■□□□□ 0.3
HCG9-201ENST00000376800 CA12O43570 354 aa16.94■□□□□ 0.3
HCG9-201ENST00000376800 CT47B1P0C2W7 299 aaPredicted RBP16.94■□□□□ 0.3
HCG9-201ENST00000376800 NF2P35240 595 aa16.94■□□□□ 0.3
HCG9-201ENST00000376800 NBPF12Q5TAG4 269 aaPredicted RBP16.94■□□□□ 0.3
HCG9-201ENST00000376800 VPS37DQ86XT2 251 aa16.94■□□□□ 0.3
HCG9-201ENST00000376800 API5Q9BZZ5 524 aaKnown RBP16.94■□□□□ 0.3
HCG9-201ENST00000376800 TDRD3Q9H7E2 651 aaKnown RBP16.94■□□□□ 0.3
HCG9-201ENST00000376800 CRKP46108 304 aa16.93■□□□□ 0.3
HCG9-201ENST00000376800 MMP14P50281 582 aa16.93■□□□□ 0.3
HCG9-201ENST00000376800 PUM3Q15397 648 aaKnown RBP16.93■□□□□ 0.3
HCG9-201ENST00000376800 CLMNQ96JQ2 1002 aa16.93■□□□□ 0.3
HCG9-201ENST00000376800 FRAT2O75474 233 aaPredicted RBP16.92■□□□□ 0.3
HCG9-201ENST00000376800 CACNB3P54284 484 aa16.92■□□□□ 0.3
HCG9-201ENST00000376800 DIEXFQ68CQ4 756 aaKnown RBP16.92■□□□□ 0.3
HCG9-201ENST00000376800 MCOLN1Q9GZU1 580 aa16.92■□□□□ 0.3
HCG9-201ENST00000376800 ZNF70Q9UC06 446 aaPredicted RBP16.92■□□□□ 0.3
HCG9-201ENST00000376800 LAMB1P07942 1786 aa16.92■□□□□ 0.3
HCG9-201ENST00000376800 TCP10L2B9ZVM9 353 aa16.91■□□□□ 0.3
HCG9-201ENST00000376800 HNRNPUQ00839 825 aaKnown RBP eCLIP16.91■□□□□ 0.3
HCG9-201ENST00000376800 RASA3Q14644 834 aa16.91■□□□□ 0.3
HCG9-201ENST00000376800 SPDYE2Q495Y8 402 aa16.91■□□□□ 0.3
HCG9-201ENST00000376800 CAVIN4Q5BKX8 364 aa16.91■□□□□ 0.3
HCG9-201ENST00000376800 ARMC9Q7Z3E5 817 aa16.91■□□□□ 0.3
HCG9-201ENST00000376800 DZIP1LQ8IYY4 767 aaKnown RBP16.91■□□□□ 0.3
HCG9-201ENST00000376800 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
HCG9-201ENST00000376800 CLUAP1Q96AJ1 413 aa16.91■□□□□ 0.3
HCG9-201ENST00000376800 KIF16BQ96L93 1317 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms