RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 IFFO2Q5TF58 517 aa23.86■■□□□ 1.41
VSX1-202ENST00000376709 ESPNB1AK53 854 aa23.86■■□□□ 1.41
VSX1-202ENST00000376709 LETM1O95202 739 aaPredicted RBP23.86■■□□□ 1.41
VSX1-202ENST00000376709 NTSR2O95665 410 aa23.86■■□□□ 1.41
VSX1-202ENST00000376709 ARID4AP29374 1257 aaPredicted RBP23.86■■□□□ 1.41
VSX1-202ENST00000376709 ADD2P35612 726 aa23.86■■□□□ 1.41
VSX1-202ENST00000376709 THSD7AQ9UPZ6 1657 aa23.85■■□□□ 1.41
VSX1-202ENST00000376709 ZNF831Q5JPB2 1677 aa23.85■■□□□ 1.41
VSX1-202ENST00000376709 CCDC152Q4G0S7 254 aa23.85■■□□□ 1.41
VSX1-202ENST00000376709 MEX3CQ5U5Q3 659 aaKnown RBP23.85■■□□□ 1.41
VSX1-202ENST00000376709 SMARCC2Q8TAQ2 1214 aa23.85■■□□□ 1.41
VSX1-202ENST00000376709 MYO5AQ9Y4I1 1855 aaKnown RBP23.85■■□□□ 1.41
VSX1-202ENST00000376709 ARAP2Q8WZ64 1704 aa23.84■■□□□ 1.41
VSX1-202ENST00000376709 SLC5A1P13866 664 aa23.84■■□□□ 1.41
VSX1-202ENST00000376709 CCT2P78371 535 aaKnown RBP23.84■■□□□ 1.41
VSX1-202ENST00000376709 SMIM5Q71RC9 77 aa23.84■■□□□ 1.41
VSX1-202ENST00000376709 SCAND2PQ9GZW5 306 aaPredicted RBP23.84■■□□□ 1.41
VSX1-202ENST00000376709 PIH1D3Q9NQM4 214 aaKnown RBP23.84■■□□□ 1.41
VSX1-202ENST00000376709 SEC31BQ9NQW1 1179 aa23.84■■□□□ 1.41
VSX1-202ENST00000376709 DDX60Q8IY21 1712 aaKnown RBP23.84■■□□□ 1.41
VSX1-202ENST00000376709 FGFR2P21802 821 aa23.84■■□□□ 1.41
VSX1-202ENST00000376709 CLCN1P35523 988 aa23.84■■□□□ 1.41
VSX1-202ENST00000376709 TTC6Q86TZ1 520 aa23.84■■□□□ 1.41
VSX1-202ENST00000376709 NSUN7Q8NE18 718 aaKnown RBP23.84■■□□□ 1.41
VSX1-202ENST00000376709 ZNF652Q9Y2D9 606 aa23.84■■□□□ 1.41
VSX1-202ENST00000376709 BCORQ6W2J9 1755 aa23.83■■□□□ 1.41
VSX1-202ENST00000376709 ELP1O95163 1332 aa23.83■■□□□ 1.41
VSX1-202ENST00000376709 ZNF213O14771 459 aa23.83■■□□□ 1.41
VSX1-202ENST00000376709 HMGN5P82970 282 aaKnown RBP23.83■■□□□ 1.41
VSX1-202ENST00000376709 KIF3AQ9Y496 699 aa23.83■■□□□ 1.41
VSX1-202ENST00000376709 CERKQ8TCT0 537 aa23.82■■□□□ 1.4
VSX1-202ENST00000376709 ZNF274Q96GC6 653 aaPredicted RBP23.82■■□□□ 1.4
VSX1-202ENST00000376709 ATRNO75882 1429 aa23.82■■□□□ 1.4
VSX1-202ENST00000376709 BTAF1O14981 1849 aa23.82■■□□□ 1.4
VSX1-202ENST00000376709 PTPDC1A2A3K4 754 aa23.82■■□□□ 1.4
VSX1-202ENST00000376709 PDIA3P30101 505 aaKnown RBP23.82■■□□□ 1.4
VSX1-202ENST00000376709 IGHMBP2P38935 993 aaKnown RBP23.82■■□□□ 1.4
VSX1-202ENST00000376709 UBE3CQ15386 1083 aa23.82■■□□□ 1.4
VSX1-202ENST00000376709 RALYLQ86SE5 291 aaKnown RBP23.82■■□□□ 1.4
VSX1-202ENST00000376709 SPATA32Q96LK8 384 aa23.82■■□□□ 1.4
VSX1-202ENST00000376709 NCOA5Q9HCD5 579 aaKnown RBP23.82■■□□□ 1.4
VSX1-202ENST00000376709 MCM5P33992 734 aa23.81■■□□□ 1.4
VSX1-202ENST00000376709 CHMP4CQ96CF2 233 aa23.81■■□□□ 1.4
VSX1-202ENST00000376709 CNTNAP4Q9C0A0 1308 aa23.81■■□□□ 1.4
VSX1-202ENST00000376709 ZNF532Q9HCE3 1301 aa23.81■■□□□ 1.4
VSX1-202ENST00000376709 CTDNEP1O95476 244 aa23.81■■□□□ 1.4
VSX1-202ENST00000376709 FBXL16Q8N461 479 aa23.81■■□□□ 1.4
VSX1-202ENST00000376709 SPATA5Q8NB90 893 aa23.81■■□□□ 1.4
VSX1-202ENST00000376709 NCOA7Q8NI08 942 aa23.81■■□□□ 1.4
VSX1-202ENST00000376709 TFIP11Q9UBB9 837 aaKnown RBP23.81■■□□□ 1.4
VSX1-202ENST00000376709 HSPA1LP34931 641 aa23.8■■□□□ 1.4
VSX1-202ENST00000376709 ZSCAN16Q9H4T2 348 aaPredicted RBP23.8■■□□□ 1.4
VSX1-202ENST00000376709 LAMB2P55268 1798 aa23.8■■□□□ 1.4
VSX1-202ENST00000376709 GOLGA6L4A6NEF3 574 aa23.79■■□□□ 1.4
VSX1-202ENST00000376709 PRC1O43663 620 aa23.79■■□□□ 1.4
VSX1-202ENST00000376709 APPP05067 770 aa23.79■■□□□ 1.4
VSX1-202ENST00000376709 PDE6AP16499 860 aa23.79■■□□□ 1.4
VSX1-202ENST00000376709 NHSQ6T4R5 1651 aa23.79■■□□□ 1.4
VSX1-202ENST00000376709 SNAP23O00161 211 aa23.79■■□□□ 1.4
VSX1-202ENST00000376709 RESTQ13127 1097 aa23.79■■□□□ 1.4
VSX1-202ENST00000376709 CLEC4GQ6UXB4 293 aa23.79■■□□□ 1.4
VSX1-202ENST00000376709 PDLIM2Q96JY6 352 aa23.79■■□□□ 1.4
VSX1-202ENST00000376709 GJD4Q96KN9 370 aaPredicted RBP23.79■■□□□ 1.4
VSX1-202ENST00000376709 WWC3Q9ULE0 1092 aa23.79■■□□□ 1.4
VSX1-202ENST00000376709 MB21D2Q8IYB1 491 aaPredicted RBP23.78■■□□□ 1.4
VSX1-202ENST00000376709 AFF2P51816 1311 aa23.78■■□□□ 1.4
VSX1-202ENST00000376709 FOSBP53539 338 aa23.78■■□□□ 1.4
VSX1-202ENST00000376709 RASGRF1Q13972 1273 aa23.78■■□□□ 1.4
VSX1-202ENST00000376709 AIDAQ96BJ3 306 aa23.78■■□□□ 1.4
VSX1-202ENST00000376709 RTL9Q8NET4 1388 aa23.78■■□□□ 1.4
VSX1-202ENST00000376709 TRDNQ13061 729 aa23.77■■□□□ 1.4
VSX1-202ENST00000376709 NAA16Q6N069 864 aaPredicted RBP23.77■■□□□ 1.4
VSX1-202ENST00000376709 LEO1Q8WVC0 666 aaPredicted RBP23.77■■□□□ 1.4
VSX1-202ENST00000376709 GPHNQ9NQX3 736 aaPredicted RBP23.77■■□□□ 1.4
VSX1-202ENST00000376709 EVCP57679 992 aa23.76■■□□□ 1.39
VSX1-202ENST00000376709 MAP3K12Q12852 859 aa23.76■■□□□ 1.39
VSX1-202ENST00000376709 GIMAP6Q6P9H5 292 aa23.76■■□□□ 1.39
VSX1-202ENST00000376709 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.76■■□□□ 1.39
VSX1-202ENST00000376709 SALL1Q9NSC2 1324 aa23.76■■□□□ 1.39
VSX1-202ENST00000376709 ERFEQ4G0M1 354 aa23.76■■□□□ 1.39
VSX1-202ENST00000376709 BICDL1Q6ZP65 573 aa23.76■■□□□ 1.39
VSX1-202ENST00000376709 TCRBV5S4A2TA0A5A2 114 aa23.75■■□□□ 1.39
VSX1-202ENST00000376709 PPFIA3O75145 1194 aa23.75■■□□□ 1.39
VSX1-202ENST00000376709 CCNL1Q9UK58 526 aaPredicted RBP23.75■■□□□ 1.39
VSX1-202ENST00000376709 MAGEB6Q8N7X4 407 aa23.75■■□□□ 1.39
VSX1-202ENST00000376709 CFAP45Q9UL16 551 aa23.75■■□□□ 1.39
VSX1-202ENST00000376709 SCN7AQ01118 1682 aa23.74■■□□□ 1.39
VSX1-202ENST00000376709 KLF18A0A0U1RQI7 1052 aa23.74■■□□□ 1.39
VSX1-202ENST00000376709 GNPATO15228 680 aa23.74■■□□□ 1.39
VSX1-202ENST00000376709 TBC1D9BQ66K14 1250 aa23.74■■□□□ 1.39
VSX1-202ENST00000376709 KLHL34Q8N239 644 aa23.74■■□□□ 1.39
VSX1-202ENST00000376709 CDC5LQ99459 802 aaKnown RBP23.74■■□□□ 1.39
VSX1-202ENST00000376709 BCL2L12Q9HB09 334 aa23.74■■□□□ 1.39
VSX1-202ENST00000376709 SRP68Q9UHB9 627 aaKnown RBP23.74■■□□□ 1.39
VSX1-202ENST00000376709 DOCK2Q92608 1830 aa23.74■■□□□ 1.39
VSX1-202ENST00000376709 GOLGA8BA8MQT2 603 aa23.74■■□□□ 1.39
VSX1-202ENST00000376709 DHX16O60231 1041 aaKnown RBP23.74■■□□□ 1.39
VSX1-202ENST00000376709 ANTXR2P58335 489 aa23.74■■□□□ 1.39
VSX1-202ENST00000376709 CHRNDQ07001 517 aa23.74■■□□□ 1.39
VSX1-202ENST00000376709 RC3H1Q5TC82 1133 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms