RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SEC31AO94979 1220 aaKnown RBP19.16■□□□□ 0.66
TRIM39-201ENST00000376656 CAPN2P17655 700 aa19.15■□□□□ 0.66
TRIM39-201ENST00000376656 NEXNQ0ZGT2 675 aa19.15■□□□□ 0.66
TRIM39-201ENST00000376656 SH3TC1Q8TE82 1336 aa19.15■□□□□ 0.66
TRIM39-201ENST00000376656 CDK11BP21127 795 aaKnown RBP19.15■□□□□ 0.66
TRIM39-201ENST00000376656 TPM4P67936 248 aa19.15■□□□□ 0.66
TRIM39-201ENST00000376656 KBTBD3Q8NAB2 608 aa19.15■□□□□ 0.66
TRIM39-201ENST00000376656 GPHNQ9NQX3 736 aaPredicted RBP19.15■□□□□ 0.66
TRIM39-201ENST00000376656 URI1O94763 535 aaPredicted RBP19.15■□□□□ 0.66
TRIM39-201ENST00000376656 ZNF202O95125 648 aa19.15■□□□□ 0.66
TRIM39-201ENST00000376656 TUBB4AP04350 444 aa19.15■□□□□ 0.66
TRIM39-201ENST00000376656 CARD6Q9BX69 1037 aa19.15■□□□□ 0.66
TRIM39-201ENST00000376656 TBX22Q9Y458 520 aa19.15■□□□□ 0.66
TRIM39-201ENST00000376656 TULP2O00295 520 aa19.14■□□□□ 0.65
TRIM39-201ENST00000376656 TADA3O75528 432 aa19.14■□□□□ 0.65
TRIM39-201ENST00000376656 GOLGA8FQ08AF8 430 aa19.14■□□□□ 0.65
TRIM39-201ENST00000376656 GOLGA8DPQ0D2H9 430 aa19.14■□□□□ 0.65
TRIM39-201ENST00000376656 MNS1Q8NEH6 495 aa19.14■□□□□ 0.65
TRIM39-201ENST00000376656 DPF2Q92785 391 aa19.14■□□□□ 0.65
TRIM39-201ENST00000376656 ZNF274Q96GC6 653 aaPredicted RBP19.14■□□□□ 0.65
TRIM39-201ENST00000376656 HSD3B7Q9H2F3 369 aa19.14■□□□□ 0.65
TRIM39-201ENST00000376656 EPC1Q9H2F5 836 aa19.14■□□□□ 0.65
TRIM39-201ENST00000376656 ARGLU1Q9NWB6 273 aaPredicted RBP19.14■□□□□ 0.65
TRIM39-201ENST00000376656 XAGE3Q8WTP9 111 aa19.14■□□□□ 0.65
TRIM39-201ENST00000376656 SPTLC2O15270 562 aa19.13■□□□□ 0.65
TRIM39-201ENST00000376656 PTPN21Q16825 1174 aa19.13■□□□□ 0.65
TRIM39-201ENST00000376656 AMOTQ4VCS5 1084 aa19.13■□□□□ 0.65
TRIM39-201ENST00000376656 GJB4Q9NTQ9 266 aa19.13■□□□□ 0.65
TRIM39-201ENST00000376656 GOLIM4O00461 696 aa19.13■□□□□ 0.65
TRIM39-201ENST00000376656 KCNG4Q8TDN1 519 aa19.13■□□□□ 0.65
TRIM39-201ENST00000376656 DSCC1Q9BVC3 393 aa19.13■□□□□ 0.65
TRIM39-201ENST00000376656 NFAT5O94916 1531 aa19.12■□□□□ 0.65
TRIM39-201ENST00000376656 COPS6Q7L5N1 327 aa19.12■□□□□ 0.65
TRIM39-201ENST00000376656 REXO1L1PQ8IX06 675 aa19.12■□□□□ 0.65
TRIM39-201ENST00000376656 NEK11Q8NG66 645 aa19.12■□□□□ 0.65
TRIM39-201ENST00000376656 UTP14AQ9BVJ6 771 aaKnown RBP19.12■□□□□ 0.65
TRIM39-201ENST00000376656 METTL22Q9BUU2 404 aaPredicted RBP19.12■□□□□ 0.65
TRIM39-201ENST00000376656 PARP3Q9Y6F1 533 aa19.12■□□□□ 0.65
TRIM39-201ENST00000376656 YEATS4O95619 227 aa19.12■□□□□ 0.65
TRIM39-201ENST00000376656 HSPD1P10809 573 aaKnown RBP19.12■□□□□ 0.65
TRIM39-201ENST00000376656 SLC39A6Q13433 755 aa19.12■□□□□ 0.65
TRIM39-201ENST00000376656 POLR3EQ9NVU0 708 aa19.12■□□□□ 0.65
TRIM39-201ENST00000376656 PFKFB1P16118 471 aa19.11■□□□□ 0.65
TRIM39-201ENST00000376656 CEBPAP49715 358 aaPredicted RBP19.11■□□□□ 0.65
TRIM39-201ENST00000376656 DHX8Q14562 1220 aaKnown RBP19.11■□□□□ 0.65
TRIM39-201ENST00000376656 TTLL5Q6EMB2 1281 aa19.11■□□□□ 0.65
TRIM39-201ENST00000376656 C8orf76Q96K31 380 aa19.11■□□□□ 0.65
TRIM39-201ENST00000376656 CCP110O43303 1012 aa19.11■□□□□ 0.65
TRIM39-201ENST00000376656 MYSM1Q5VVJ2 828 aa19.11■□□□□ 0.65
TRIM39-201ENST00000376656 UBE3BQ7Z3V4 1068 aa19.11■□□□□ 0.65
TRIM39-201ENST00000376656 FAM177A1Q8N128 213 aaPredicted RBP19.11■□□□□ 0.65
TRIM39-201ENST00000376656 SASH3O75995 380 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 UBASH3AP57075 661 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 TMX1Q9H3N1 280 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 HELLSQ9NRZ9 838 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 MROH7-TTC4A0A0A0MT08 1334 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 EVCP57679 992 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 ST5P78524 1137 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 AXDND1Q5T1B0 1012 aaPredicted RBP19.1■□□□□ 0.65
TRIM39-201ENST00000376656 ZCCHC17Q9NP64 241 aaKnown RBP19.1■□□□□ 0.65
TRIM39-201ENST00000376656 EFCAB8A8MWE9 144 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 KIF28PB7ZC32 967 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 IKBKBO14920 756 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 KCNA6P17658 529 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 PIP4K2AP48426 406 aaPredicted RBP19.1■□□□□ 0.65
TRIM39-201ENST00000376656 LRRFIP1Q32MZ4 808 aaKnown RBP19.1■□□□□ 0.65
TRIM39-201ENST00000376656 RAB11FIP4Q86YS3 637 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 PAG1Q9NWQ8 432 aa19.1■□□□□ 0.65
TRIM39-201ENST00000376656 PALLDQ8WX93 1383 aa19.09■□□□□ 0.65
TRIM39-201ENST00000376656 TMEM232C9JQI7 657 aa19.09■□□□□ 0.65
TRIM39-201ENST00000376656 TEX35Q5T0J7 233 aa19.09■□□□□ 0.65
TRIM39-201ENST00000376656 SRRTQ9BXP5 876 aaKnown RBP19.09■□□□□ 0.65
TRIM39-201ENST00000376656 TBC1D8O95759 1140 aa19.09■□□□□ 0.65
TRIM39-201ENST00000376656 SERPINC1P01008 464 aa19.09■□□□□ 0.65
TRIM39-201ENST00000376656 ZMYM1Q5SVZ6 1142 aa19.09■□□□□ 0.65
TRIM39-201ENST00000376656 NEUROD6Q96NK8 337 aa19.09■□□□□ 0.65
TRIM39-201ENST00000376656 WDHD1O75717 1129 aaPredicted RBP19.08■□□□□ 0.65
TRIM39-201ENST00000376656 CFAP100Q494V2 611 aa19.08■□□□□ 0.65
TRIM39-201ENST00000376656 FBXO18Q8NFZ0 1043 aa19.08■□□□□ 0.65
TRIM39-201ENST00000376656 UBXN6Q9BZV1 441 aa19.08■□□□□ 0.65
TRIM39-201ENST00000376656 VWA3AA6NCI4 1184 aa19.08■□□□□ 0.65
TRIM39-201ENST00000376656 MARCKSP29966 332 aaPredicted RBP19.08■□□□□ 0.65
TRIM39-201ENST00000376656 PSME1Q06323 249 aa19.08■□□□□ 0.65
TRIM39-201ENST00000376656 CCDC158Q5M9N0 1113 aa19.08■□□□□ 0.65
TRIM39-201ENST00000376656 SMARCE1Q969G3 411 aa19.08■□□□□ 0.65
TRIM39-201ENST00000376656 PHF8Q9UPP1 1060 aa19.08■□□□□ 0.65
TRIM39-201ENST00000376656 MAST3O60307 1309 aa19.08■□□□□ 0.65
TRIM39-201ENST00000376656 OVOS2A0A0G2JMS6 1433 aa19.08■□□□□ 0.64
TRIM39-201ENST00000376656 RABL6Q3YEC7 729 aaPredicted RBP19.08■□□□□ 0.64
TRIM39-201ENST00000376656 ANO1Q5XXA6 986 aa19.08■□□□□ 0.64
TRIM39-201ENST00000376656 CMA1P23946 247 aa19.07■□□□□ 0.64
TRIM39-201ENST00000376656 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
TRIM39-201ENST00000376656 SYNE3Q6ZMZ3 975 aa19.07■□□□□ 0.64
TRIM39-201ENST00000376656 SIPA1L3O60292 1781 aaPredicted RBP19.07■□□□□ 0.64
TRIM39-201ENST00000376656 OAS2P29728 719 aaKnown RBP19.07■□□□□ 0.64
TRIM39-201ENST00000376656 RAD51AP2Q09MP3 1159 aa19.07■□□□□ 0.64
TRIM39-201ENST00000376656 CC2D1AQ6P1N0 951 aaPredicted RBP19.07■□□□□ 0.64
TRIM39-201ENST00000376656 VSTM4Q8IW00 320 aa19.07■□□□□ 0.64
TRIM39-201ENST00000376656 CCDC34Q96HJ3 373 aa19.07■□□□□ 0.64
TRIM39-201ENST00000376656 C5P01031 1676 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms