RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 IRX5P78411 483 aaPredicted RBP17.71■□□□□ 0.43
CCHCR1-201ENST00000376266 ST5P78524 1137 aa17.71■□□□□ 0.43
CCHCR1-201ENST00000376266 RABL6Q3YEC7 729 aaPredicted RBP17.71■□□□□ 0.43
CCHCR1-201ENST00000376266 FAM200AQ8TCP9 573 aa17.71■□□□□ 0.43
CCHCR1-201ENST00000376266 SMC3Q9UQE7 1217 aa17.71■□□□□ 0.43
CCHCR1-201ENST00000376266 ATP8B2P98198 1209 aa17.7■□□□□ 0.42
CCHCR1-201ENST00000376266 TTLL11Q8NHH1 800 aa17.7■□□□□ 0.42
CCHCR1-201ENST00000376266 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.7■□□□□ 0.42
CCHCR1-201ENST00000376266 GOLGB1Q14789 3259 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-201ENST00000376266 DDX60Q8IY21 1712 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-201ENST00000376266 DNM1Q05193 864 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-201ENST00000376266 IL17RAQ96F46 866 aa17.7■□□□□ 0.42
CCHCR1-201ENST00000376266 TPD52L1Q16890 204 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-201ENST00000376266 IPO4Q8TEX9 1081 aaKnown RBP17.69■□□□□ 0.42
CCHCR1-201ENST00000376266 LARP6Q9BRS8 491 aaKnown RBP17.69■□□□□ 0.42
CCHCR1-201ENST00000376266 CSF1RP07333 972 aa17.69■□□□□ 0.42
CCHCR1-201ENST00000376266 HSP90B1P14625 803 aaKnown RBP17.69■□□□□ 0.42
CCHCR1-201ENST00000376266 ZNF592Q92610 1267 aa17.69■□□□□ 0.42
CCHCR1-201ENST00000376266 TIGD1Q96MW7 591 aa17.69■□□□□ 0.42
CCHCR1-201ENST00000376266 NLRP3Q96P20 1036 aa17.69■□□□□ 0.42
CCHCR1-201ENST00000376266 LRRCC1Q9C099 1032 aa17.69■□□□□ 0.42
CCHCR1-201ENST00000376266 MTX1Q13505 466 aa17.68■□□□□ 0.42
CCHCR1-201ENST00000376266 LUZP1Q86V48 1076 aa17.68■□□□□ 0.42
CCHCR1-201ENST00000376266 GREM2Q9H772 168 aa17.68■□□□□ 0.42
CCHCR1-201ENST00000376266 NRBP1Q9UHY1 535 aa17.68■□□□□ 0.42
CCHCR1-201ENST00000376266 HSPA4P34932 840 aa17.68■□□□□ 0.42
CCHCR1-201ENST00000376266 NRXN2Q9P2S2 1712 aa17.68■□□□□ 0.42
CCHCR1-201ENST00000376266 KLHDC4Q8TBB5 520 aa17.68■□□□□ 0.42
CCHCR1-201ENST00000376266 SALL3Q9BXA9 1300 aa17.67■□□□□ 0.42
CCHCR1-201ENST00000376266 POLD1P28340 1107 aa17.67■□□□□ 0.42
CCHCR1-201ENST00000376266 ZSCAN25Q6NSZ9 544 aa17.67■□□□□ 0.42
CCHCR1-201ENST00000376266 ZNF397Q8NF99 534 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-201ENST00000376266 SSH3Q8TE77 659 aa17.67■□□□□ 0.42
CCHCR1-201ENST00000376266 TRIM5Q9C035 493 aa17.67■□□□□ 0.42
CCHCR1-201ENST00000376266 LIMCH1Q9UPQ0 1083 aa17.67■□□□□ 0.42
CCHCR1-201ENST00000376266 AK2P54819 239 aa17.67■□□□□ 0.42
CCHCR1-201ENST00000376266 MAP3K11Q16584 847 aa17.67■□□□□ 0.42
CCHCR1-201ENST00000376266 TNRC6CQ9HCJ0 1690 aaKnown RBP17.67■□□□□ 0.42
CCHCR1-201ENST00000376266 TYRO3Q06418 890 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 SGIP1Q9BQI5 828 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 BRIP1Q9BX63 1249 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 MYH3P11055 1940 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 LAMB2P55268 1798 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 ERICH4A6NGS2 130 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 ITGA6P23229 1130 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 PTGER2P43116 358 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 POLA2Q14181 598 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 SF3B3Q15393 1217 aaKnown RBP17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 CAMK4Q16566 473 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 CCDC152Q4G0S7 254 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 CEP135Q66GS9 1140 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 SEC31BQ9NQW1 1179 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 PA2G4Q9UQ80 394 aaKnown RBP17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 MRVI1Q9Y6F6 885 aa17.66■□□□□ 0.42
CCHCR1-201ENST00000376266 CCDC57Q2TAC2 916 aa17.65■□□□□ 0.42
CCHCR1-201ENST00000376266 ZNF594Q96JF6 807 aaPredicted RBP17.65■□□□□ 0.42
CCHCR1-201ENST00000376266 RFX5P48382 616 aaPredicted RBP17.65■□□□□ 0.42
CCHCR1-201ENST00000376266 IFIT5Q13325 482 aaKnown RBP17.65■□□□□ 0.42
CCHCR1-201ENST00000376266 KMT5BQ4FZB7 885 aa17.65■□□□□ 0.42
CCHCR1-201ENST00000376266 NUP62CLQ9H1M0 184 aa17.65■□□□□ 0.42
CCHCR1-201ENST00000376266 RUFY3Q7L099 469 aa17.64■□□□□ 0.41
CCHCR1-201ENST00000376266 IL25Q9H293 177 aa17.64■□□□□ 0.41
CCHCR1-201ENST00000376266 CALCOCO1Q9P1Z2 691 aa17.64■□□□□ 0.41
CCHCR1-201ENST00000376266 ZNF75DP51815 510 aa17.64■□□□□ 0.41
CCHCR1-201ENST00000376266 TTC14Q96N46 770 aa17.64■□□□□ 0.41
CCHCR1-201ENST00000376266 CBX8Q9HC52 389 aa17.64■□□□□ 0.41
CCHCR1-201ENST00000376266 EPB41L2O43491 1005 aaKnown RBP17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 GJB2P29033 226 aa17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 PTPN12Q05209 780 aaKnown RBP17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 SIL1Q9H173 461 aa17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 SPON1Q9HCB6 807 aa17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 MTMR6Q9Y217 621 aa17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 SNX14Q9Y5W7 946 aa17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 RIC1Q4ADV7 1423 aa17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 ANKRD31Q8N7Z5 1873 aa17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 VPS37CA5D8V6 355 aaPredicted RBP17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 DTNBO60941 627 aa17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 ANO6Q4KMQ2 910 aa17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 V9GYY5 206 aaPredicted RBP17.63■□□□□ 0.41
CCHCR1-201ENST00000376266 ANKRD18BA2A2Z9 1011 aa17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 KLRG2A4D1S0 409 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 PDE6BP35913 854 aa17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 CRY2Q49AN0 593 aa17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 CKAP2LQ8IYA6 745 aa17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 DNAJC2Q99543 621 aaKnown RBP17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 SURF6O75683 361 aaKnown RBP17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 PLA2G4DQ86XP0 818 aa17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 CCDC83Q8IWF9 413 aa17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 CACTINQ8WUQ7 758 aaKnown RBP17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 PPP1R1BQ9UD71 204 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 CLIP2Q9UDT6 1046 aa17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 STAP2Q9UGK3 403 aa17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 ZNF215Q9UL58 517 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-201ENST00000376266 TAF7LQ5H9L4 462 aa17.61■□□□□ 0.41
CCHCR1-201ENST00000376266 RPGRQ92834 1020 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-201ENST00000376266 TNMDQ9H2S6 317 aa17.61■□□□□ 0.41
CCHCR1-201ENST00000376266 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
CCHCR1-201ENST00000376266 DDX46Q7L014 1031 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms