RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 SAMM50Q9Y512 469 aa15.58■□□□□ 0.08
C9orf47-203ENST00000375851 NDUFB9Q9Y6M9 179 aa15.58■□□□□ 0.08
C9orf47-203ENST00000375851 PPP4R3BQ5MIZ7 849 aa15.58■□□□□ 0.08
C9orf47-203ENST00000375851 DHX58Q96C10 678 aa15.58■□□□□ 0.08
C9orf47-203ENST00000375851 PLEKHF1Q96S99 279 aa15.58■□□□□ 0.08
C9orf47-203ENST00000375851 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.58■□□□□ 0.08
C9orf47-203ENST00000375851 SAMD9LQ8IVG5 1584 aa15.58■□□□□ 0.08
C9orf47-203ENST00000375851 CETN1Q12798 172 aa15.57■□□□□ 0.08
C9orf47-203ENST00000375851 FBXO3Q9UK99 471 aa15.57■□□□□ 0.08
C9orf47-203ENST00000375851 GOLGA6L9A6NEM1 432 aa15.57■□□□□ 0.08
C9orf47-203ENST00000375851 LMOD1P29536 600 aaPredicted RBP15.57■□□□□ 0.08
C9orf47-203ENST00000375851 B4E1Z4 1266 aa15.57■□□□□ 0.08
C9orf47-203ENST00000375851 TRAPPC3LQ5T215 181 aa15.57■□□□□ 0.08
C9orf47-203ENST00000375851 DENND2AQ9ULE3 1009 aa15.57■□□□□ 0.08
C9orf47-203ENST00000375851 SKILP12757 684 aa15.57■□□□□ 0.08
C9orf47-203ENST00000375851 CETN2P41208 172 aa15.57■□□□□ 0.08
C9orf47-203ENST00000375851 CHMP4BP1P59074 171 aa15.57■□□□□ 0.08
C9orf47-203ENST00000375851 SSH3Q8TE77 659 aa15.57■□□□□ 0.08
C9orf47-203ENST00000375851 SCLT1Q96NL6 688 aa15.57■□□□□ 0.08
C9orf47-203ENST00000375851 KIF24Q5T7B8 1368 aa15.57■□□□□ 0.08
C9orf47-203ENST00000375851 KDM5AP29375 1690 aaKnown RBP15.56■□□□□ 0.08
C9orf47-203ENST00000375851 SPAG1Q07617 926 aa15.56■□□□□ 0.08
C9orf47-203ENST00000375851 NEURL1BA8MQ27 555 aa15.56■□□□□ 0.08
C9orf47-203ENST00000375851 GPAA1O43292 621 aa15.56■□□□□ 0.08
C9orf47-203ENST00000375851 GNG11P61952 73 aa15.56■□□□□ 0.08
C9orf47-203ENST00000375851 TRAF1Q13077 416 aa15.56■□□□□ 0.08
C9orf47-203ENST00000375851 ERMNQ8TAM6 284 aa15.56■□□□□ 0.08
C9orf47-203ENST00000375851 C6orf50Q9HD87 102 aa15.56■□□□□ 0.08
C9orf47-203ENST00000375851 STXBP4Q6ZWJ1 553 aa15.56■□□□□ 0.08
C9orf47-203ENST00000375851 TAX1BP1Q86VP1 789 aa15.56■□□□□ 0.08
C9orf47-203ENST00000375851 TRMT2AQ8IZ69 625 aaKnown RBP15.56■□□□□ 0.08
C9orf47-203ENST00000375851 TTC12Q9H892 705 aaPredicted RBP15.56■□□□□ 0.08
C9orf47-203ENST00000375851 HDAC9Q9UKV0 1011 aa15.56■□□□□ 0.08
C9orf47-203ENST00000375851 TRIM21P19474 475 aaKnown RBP15.55■□□□□ 0.08
C9orf47-203ENST00000375851 TAF3Q5VWG9 929 aa15.55■□□□□ 0.08
C9orf47-203ENST00000375851 CCNL1Q9UK58 526 aaPredicted RBP15.55■□□□□ 0.08
C9orf47-203ENST00000375851 RIMBP2O15034 1052 aa15.55■□□□□ 0.08
C9orf47-203ENST00000375851 TBCAO75347 108 aaKnown RBP15.55■□□□□ 0.08
C9orf47-203ENST00000375851 LIG1P18858 919 aa15.55■□□□□ 0.08
C9orf47-203ENST00000375851 SEPT7Q16181 437 aaKnown RBP15.55■□□□□ 0.08
C9orf47-203ENST00000375851 LUZP1Q86V48 1076 aa15.55■□□□□ 0.08
C9orf47-203ENST00000375851 UGGT1Q9NYU2 1555 aa15.55■□□□□ 0.08
C9orf47-203ENST00000375851 PSMA7O14818 248 aa15.55■□□□□ 0.08
C9orf47-203ENST00000375851 DESP17661 470 aa15.55■□□□□ 0.08
C9orf47-203ENST00000375851 SYCP3Q8IZU3 236 aa15.55■□□□□ 0.08
C9orf47-203ENST00000375851 AKR1B10O60218 316 aa15.55■□□□□ 0.08
C9orf47-203ENST00000375851 PHKG2P15735 406 aa15.55■□□□□ 0.08
C9orf47-203ENST00000375851 CNBD1Q8NA66 436 aa15.55■□□□□ 0.08
C9orf47-203ENST00000375851 CCDC87Q9NVE4 849 aa15.55■□□□□ 0.08
C9orf47-203ENST00000375851 KRT2P35908 639 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 ASIC1P78348 528 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 FAM173BQ6P4H8 233 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 ARMT1Q9H993 441 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 ERVV-2B6SEH9 535 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 TAF5LO75529 589 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 HIBADHP31937 336 aaKnown RBP15.54■□□□□ 0.08
C9orf47-203ENST00000375851 TMEM87BQ96K49 555 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 CTAGE1Q96RT6 745 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 NCOA5Q9HCD5 579 aaKnown RBP15.54■□□□□ 0.08
C9orf47-203ENST00000375851 AATKQ6ZMQ8 1374 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 IBSPP21815 317 aaPredicted RBP15.54■□□□□ 0.08
C9orf47-203ENST00000375851 USP8P40818 1118 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 NOLC1Q14978 699 aaKnown RBP eCLIP15.54■□□□□ 0.08
C9orf47-203ENST00000375851 ATL3Q6DD88 541 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 MAP9Q49MG5 647 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 CEP135Q66GS9 1140 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 LPIN2Q92539 896 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 ZKSCAN5Q9Y2L8 839 aa15.54■□□□□ 0.08
C9orf47-203ENST00000375851 FAM135BQ49AJ0 1406 aa15.53■□□□□ 0.08
C9orf47-203ENST00000375851 HSPA4P34932 840 aa15.53■□□□□ 0.08
C9orf47-203ENST00000375851 RRP36Q96EU6 259 aaKnown RBP15.53■□□□□ 0.08
C9orf47-203ENST00000375851 ANGEL1Q9UNK9 670 aaKnown RBP15.53■□□□□ 0.08
C9orf47-203ENST00000375851 TCIRG1Q13488 830 aa15.53■□□□□ 0.08
C9orf47-203ENST00000375851 PARP3Q9Y6F1 533 aa15.53■□□□□ 0.08
C9orf47-203ENST00000375851 GSPT1P15170 499 aaKnown RBP15.53■□□□□ 0.08
C9orf47-203ENST00000375851 EDC3Q96F86 508 aaKnown RBP15.53■□□□□ 0.08
C9orf47-203ENST00000375851 A0A1B0GVL5 298 aa15.52■□□□□ 0.08
C9orf47-203ENST00000375851 ATP5JP18859 108 aa15.52■□□□□ 0.08
C9orf47-203ENST00000375851 TNNI2P48788 182 aa15.52■□□□□ 0.08
C9orf47-203ENST00000375851 MLH3Q9UHC1 1453 aa15.52■□□□□ 0.08
C9orf47-203ENST00000375851 GNA11P29992 359 aa15.52■□□□□ 0.08
C9orf47-203ENST00000375851 ALS2CR12Q96Q35 445 aa15.52■□□□□ 0.08
C9orf47-203ENST00000375851 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.52■□□□□ 0.07
C9orf47-203ENST00000375851 DTNBO60941 627 aa15.52■□□□□ 0.07
C9orf47-203ENST00000375851 KIAA0754O94854 1291 aa15.52■□□□□ 0.07
C9orf47-203ENST00000375851 MCM7P33993 719 aa15.52■□□□□ 0.07
C9orf47-203ENST00000375851 CLCN1P35523 988 aa15.52■□□□□ 0.07
C9orf47-203ENST00000375851 ZAP70P43403 619 aa15.52■□□□□ 0.07
C9orf47-203ENST00000375851 BEND3Q5T5X7 828 aa15.52■□□□□ 0.07
C9orf47-203ENST00000375851 TTC6Q86TZ1 520 aa15.52■□□□□ 0.07
C9orf47-203ENST00000375851 KRI1Q8N9T8 703 aaKnown RBP15.52■□□□□ 0.07
C9orf47-203ENST00000375851 EAF2Q96CJ1 260 aaPredicted RBP15.52■□□□□ 0.07
C9orf47-203ENST00000375851 LLPHQ9BRT6 129 aaKnown RBP15.52■□□□□ 0.07
C9orf47-203ENST00000375851 NOP2P46087 812 aaKnown RBP15.51■□□□□ 0.07
C9orf47-203ENST00000375851 SMARCC2Q8TAQ2 1214 aa15.51■□□□□ 0.07
C9orf47-203ENST00000375851 PRIMPOLQ96LW4 560 aa15.51■□□□□ 0.07
C9orf47-203ENST00000375851 EYA3Q99504 573 aa15.51■□□□□ 0.07
C9orf47-203ENST00000375851 ZNF521Q96K83 1311 aa15.51■□□□□ 0.07
C9orf47-203ENST00000375851 MYOM2P54296 1465 aa15.51■□□□□ 0.07
C9orf47-203ENST00000375851 PRDM1O75626 825 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms