RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 SCARF1Q14162 830 aa20.78■□□□□ 0.92
CLIC1-208ENST00000375784 PKN2Q16513 984 aaKnown RBP20.78■□□□□ 0.92
CLIC1-208ENST00000375784 ANGEL2Q5VTE6 544 aaKnown RBP20.78■□□□□ 0.92
CLIC1-208ENST00000375784 PODNQ7Z5L7 613 aa20.78■□□□□ 0.92
CLIC1-208ENST00000375784 AKAP11Q9UKA4 1901 aa20.77■□□□□ 0.92
CLIC1-208ENST00000375784 HELBQ8NG08 1087 aaPredicted RBP20.77■□□□□ 0.92
CLIC1-208ENST00000375784 CLUAP1Q96AJ1 413 aa20.77■□□□□ 0.92
CLIC1-208ENST00000375784 WTIPA6NIX2 430 aaPredicted RBP20.76■□□□□ 0.91
CLIC1-208ENST00000375784 TAF5LO75529 589 aa20.76■□□□□ 0.91
CLIC1-208ENST00000375784 GNAI3P08754 354 aa20.76■□□□□ 0.91
CLIC1-208ENST00000375784 AGBL3Q8NEM8 1001 aa20.76■□□□□ 0.91
CLIC1-208ENST00000375784 COA1Q9GZY4 146 aa20.76■□□□□ 0.91
CLIC1-208ENST00000375784 HDAC9Q9UKV0 1011 aa20.76■□□□□ 0.91
CLIC1-208ENST00000375784 PLIN1O60240 522 aa20.75■□□□□ 0.91
CLIC1-208ENST00000375784 RSBN1LQ6PCB5 846 aaPredicted RBP20.75■□□□□ 0.91
CLIC1-208ENST00000375784 ZNF296Q8WUU4 475 aaPredicted RBP20.75■□□□□ 0.91
CLIC1-208ENST00000375784 ZNF609O15014 1411 aa20.74■□□□□ 0.91
CLIC1-208ENST00000375784 TBC1D8O95759 1140 aa20.74■□□□□ 0.91
CLIC1-208ENST00000375784 FTSJ3Q8IY81 847 aaKnown RBP20.74■□□□□ 0.91
CLIC1-208ENST00000375784 MEIS3Q99687 375 aa20.74■□□□□ 0.91
CLIC1-208ENST00000375784 MROH5Q6ZUA9 1318 aa20.74■□□□□ 0.91
CLIC1-208ENST00000375784 USP17L3A6NCW0 530 aa20.73■□□□□ 0.91
CLIC1-208ENST00000375784 USP17L4A6NCW7 530 aa20.73■□□□□ 0.91
CLIC1-208ENST00000375784 MOB2Q70IA6 237 aa20.73■□□□□ 0.91
CLIC1-208ENST00000375784 USP17L1Q7RTZ2 530 aa20.73■□□□□ 0.91
CLIC1-208ENST00000375784 TXNRD3Q86VQ6 643 aa20.73■□□□□ 0.91
CLIC1-208ENST00000375784 GMLQ99445 158 aa20.73■□□□□ 0.91
CLIC1-208ENST00000375784 PUS3Q9BZE2 481 aaKnown RBP20.73■□□□□ 0.91
CLIC1-208ENST00000375784 RIPOR2Q9Y4F9 1068 aa20.73■□□□□ 0.91
CLIC1-208ENST00000375784 LRRFIP2Q9Y608 721 aaKnown RBP20.73■□□□□ 0.91
CLIC1-208ENST00000375784 PITPNM2Q9BZ72 1349 aa20.73■□□□□ 0.91
CLIC1-208ENST00000375784 PAPPA2Q9BXP8 1791 aa20.72■□□□□ 0.91
CLIC1-208ENST00000375784 SCN9AQ15858 1988 aa20.72■□□□□ 0.91
CLIC1-208ENST00000375784 USP17L8P0C7I0 530 aa20.72■□□□□ 0.91
CLIC1-208ENST00000375784 C15orf52Q6ZUT6 534 aaKnown RBP20.72■□□□□ 0.91
CLIC1-208ENST00000375784 MYOZ2Q9NPC6 264 aa20.72■□□□□ 0.91
CLIC1-208ENST00000375784 TNNQ9UQP3 1299 aa20.72■□□□□ 0.91
CLIC1-208ENST00000375784 SPEF2Q9C093 1822 aa20.71■□□□□ 0.91
CLIC1-208ENST00000375784 UBE2Q2LH0YL09 131 aa20.71■□□□□ 0.91
CLIC1-208ENST00000375784 UBE4AQ14139 1066 aa20.71■□□□□ 0.91
CLIC1-208ENST00000375784 DZIP1LQ8IYY4 767 aaKnown RBP20.71■□□□□ 0.91
CLIC1-208ENST00000375784 SNAP23O00161 211 aa20.7■□□□□ 0.9
CLIC1-208ENST00000375784 TM4SF4P48230 202 aa20.7■□□□□ 0.9
CLIC1-208ENST00000375784 LRRC24Q50LG9 513 aa20.7■□□□□ 0.9
CLIC1-208ENST00000375784 NOM1Q5C9Z4 860 aaKnown RBP20.7■□□□□ 0.9
CLIC1-208ENST00000375784 METTL24Q5JXM2 366 aa20.7■□□□□ 0.9
CLIC1-208ENST00000375784 ZNF804AQ7Z570 1209 aa20.7■□□□□ 0.9
CLIC1-208ENST00000375784 TMEM57Q8N5G2 664 aa20.7■□□□□ 0.9
CLIC1-208ENST00000375784 SCAF8Q9UPN6 1271 aaKnown RBP20.7■□□□□ 0.9
CLIC1-208ENST00000375784 GPR25O00155 361 aa20.69■□□□□ 0.9
CLIC1-208ENST00000375784 KLRK1P26718 216 aa20.69■□□□□ 0.9
CLIC1-208ENST00000375784 STRIP1Q5VSL9 837 aa20.69■□□□□ 0.9
CLIC1-208ENST00000375784 KLHDC4Q8TBB5 520 aa20.69■□□□□ 0.9
CLIC1-208ENST00000375784 FBXO3Q9UK99 471 aa20.69■□□□□ 0.9
CLIC1-208ENST00000375784 EYA2O00167 538 aa20.68■□□□□ 0.9
CLIC1-208ENST00000375784 GNAI2P04899 355 aa20.68■□□□□ 0.9
CLIC1-208ENST00000375784 MS4A1P11836 297 aa20.68■□□□□ 0.9
CLIC1-208ENST00000375784 RFX5P48382 616 aaPredicted RBP20.68■□□□□ 0.9
CLIC1-208ENST00000375784 PTPN12Q05209 780 aaKnown RBP20.68■□□□□ 0.9
CLIC1-208ENST00000375784 PRAMEF18Q5VWM3 479 aa20.68■□□□□ 0.9
CLIC1-208ENST00000375784 TTLL5Q6EMB2 1281 aa20.68■□□□□ 0.9
CLIC1-208ENST00000375784 FBXO46Q6PJ61 603 aaPredicted RBP20.68■□□□□ 0.9
CLIC1-208ENST00000375784 FBXW7Q969H0 707 aa20.68■□□□□ 0.9
CLIC1-208ENST00000375784 CD209Q9NNX6 404 aa20.68■□□□□ 0.9
CLIC1-208ENST00000375784 RCAN3Q9UKA8 241 aa20.68■□□□□ 0.9
CLIC1-208ENST00000375784 PDE8BO95263 885 aa20.67■□□□□ 0.9
CLIC1-208ENST00000375784 ITPRIPQ8IWB1 547 aa20.67■□□□□ 0.9
CLIC1-208ENST00000375784 TTLL12Q14166 644 aaPredicted RBP20.66■□□□□ 0.9
CLIC1-208ENST00000375784 NBPF9Q3BBW0 867 aa20.66■□□□□ 0.9
CLIC1-208ENST00000375784 RNF39Q9H2S5 420 aa20.66■□□□□ 0.9
CLIC1-208ENST00000375784 MYO3BQ8WXR4 1341 aa20.66■□□□□ 0.9
CLIC1-208ENST00000375784 IRS2Q9Y4H2 1338 aa20.65■□□□□ 0.9
CLIC1-208ENST00000375784 CIAO1O76071 339 aa20.65■□□□□ 0.9
CLIC1-208ENST00000375784 GTF2IP78347 998 aa20.65■□□□□ 0.9
CLIC1-208ENST00000375784 OGFOD1Q8N543 542 aa20.65■□□□□ 0.9
CLIC1-208ENST00000375784 GCC1Q96CN9 775 aa20.65■□□□□ 0.9
CLIC1-208ENST00000375784 CFHR5Q9BXR6 569 aa20.65■□□□□ 0.9
CLIC1-208ENST00000375784 SRGAP3O43295 1099 aa20.64■□□□□ 0.89
CLIC1-208ENST00000375784 FKTNO75072 461 aa20.64■□□□□ 0.89
CLIC1-208ENST00000375784 IL1R1P14778 569 aa20.64■□□□□ 0.89
CLIC1-208ENST00000375784 HIBADHP31937 336 aaKnown RBP20.64■□□□□ 0.89
CLIC1-208ENST00000375784 MKRN3Q13064 507 aaKnown RBP20.64■□□□□ 0.89
CLIC1-208ENST00000375784 MTX1Q13505 466 aa20.64■□□□□ 0.89
CLIC1-208ENST00000375784 CAVIN4Q5BKX8 364 aa20.64■□□□□ 0.89
CLIC1-208ENST00000375784 DACT2Q5SW24 774 aa20.64■□□□□ 0.89
CLIC1-208ENST00000375784 VPS37DQ86XT2 251 aa20.64■□□□□ 0.89
CLIC1-208ENST00000375784 SIL1Q9H173 461 aa20.64■□□□□ 0.89
CLIC1-208ENST00000375784 IFIT1P09914 478 aaKnown RBP20.63■□□□□ 0.89
CLIC1-208ENST00000375784 RLBP1P12271 317 aa20.63■□□□□ 0.89
CLIC1-208ENST00000375784 NF2P35240 595 aa20.63■□□□□ 0.89
CLIC1-208ENST00000375784 MMP14P50281 582 aa20.63■□□□□ 0.89
CLIC1-208ENST00000375784 SREBF2Q12772 1141 aa20.63■□□□□ 0.89
CLIC1-208ENST00000375784 PUM3Q15397 648 aaKnown RBP20.63■□□□□ 0.89
CLIC1-208ENST00000375784 VGLL2Q8N8G2 317 aa20.63■□□□□ 0.89
CLIC1-208ENST00000375784 R3HDMLQ9H3Y0 253 aa20.63■□□□□ 0.89
CLIC1-208ENST00000375784 COPRSQ9NQ92 184 aa20.63■□□□□ 0.89
CLIC1-208ENST00000375784 CEP126Q9P2H0 1117 aa20.63■□□□□ 0.89
CLIC1-208ENST00000375784 IL15P40933 162 aaPredicted RBP20.62■□□□□ 0.89
CLIC1-208ENST00000375784 ATG9AQ7Z3C6 839 aa20.62■□□□□ 0.89
CLIC1-208ENST00000375784 FAM84BQ96KN1 310 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms