RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 CXCL9Q07325 125 aa21.66■■□□□ 1.06
C6orf48-204ENST00000375639 CHAF1AQ13111 956 aaPredicted RBP21.66■■□□□ 1.06
C6orf48-204ENST00000375639 GPATCH3Q96I76 525 aa21.66■■□□□ 1.06
C6orf48-204ENST00000375639 JAG2Q9Y219 1238 aa21.66■■□□□ 1.06
C6orf48-204ENST00000375639 USP17L3A6NCW0 530 aa21.65■■□□□ 1.06
C6orf48-204ENST00000375639 USP17L4A6NCW7 530 aa21.65■■□□□ 1.06
C6orf48-204ENST00000375639 ARID4AP29374 1257 aaPredicted RBP21.65■■□□□ 1.06
C6orf48-204ENST00000375639 TTLL5Q6EMB2 1281 aa21.65■■□□□ 1.06
C6orf48-204ENST00000375639 CIAPIN1Q6FI81 312 aa21.65■■□□□ 1.06
C6orf48-204ENST00000375639 USP17L1Q7RTZ2 530 aa21.65■■□□□ 1.06
C6orf48-204ENST00000375639 ECHDC1Q9NTX5 307 aa21.65■■□□□ 1.06
C6orf48-204ENST00000375639 DENND2AQ9ULE3 1009 aa21.65■■□□□ 1.06
C6orf48-204ENST00000375639 SEMA3EO15041 775 aa21.64■■□□□ 1.05
C6orf48-204ENST00000375639 RASGRF1Q13972 1273 aa21.64■■□□□ 1.05
C6orf48-204ENST00000375639 GJA3Q9Y6H8 435 aa21.64■■□□□ 1.05
C6orf48-204ENST00000375639 TIAM2Q8IVF5 1701 aa21.63■■□□□ 1.05
C6orf48-204ENST00000375639 ZNF541Q9H0D2 1346 aa21.63■■□□□ 1.05
C6orf48-204ENST00000375639 MX1P20591 662 aa21.63■■□□□ 1.05
C6orf48-204ENST00000375639 SCARF1Q14162 830 aa21.63■■□□□ 1.05
C6orf48-204ENST00000375639 TNIP1Q15025 636 aa21.63■■□□□ 1.05
C6orf48-204ENST00000375639 STRIP1Q5VSL9 837 aa21.63■■□□□ 1.05
C6orf48-204ENST00000375639 TSHZ3Q63HK5 1081 aa21.63■■□□□ 1.05
C6orf48-204ENST00000375639 JMYQ8N9B5 988 aa21.63■■□□□ 1.05
C6orf48-204ENST00000375639 ZNF512BQ96KM6 892 aaPredicted RBP21.63■■□□□ 1.05
C6orf48-204ENST00000375639 SNRKQ9NRH2 765 aa21.63■■□□□ 1.05
C6orf48-204ENST00000375639 HMG20BQ9P0W2 317 aa21.63■■□□□ 1.05
C6orf48-204ENST00000375639 SCN9AQ15858 1988 aa21.63■■□□□ 1.05
C6orf48-204ENST00000375639 ZC3H4Q9UPT8 1303 aaKnown RBP21.62■■□□□ 1.05
C6orf48-204ENST00000375639 PSMD14O00487 310 aa21.62■■□□□ 1.05
C6orf48-204ENST00000375639 MCAMP43121 646 aa21.62■■□□□ 1.05
C6orf48-204ENST00000375639 KLRG1Q96E93 195 aa21.62■■□□□ 1.05
C6orf48-204ENST00000375639 TTC41PQ6P2S7 1318 aa21.61■■□□□ 1.05
C6orf48-204ENST00000375639 FAM205AQ6ZU69 1335 aa21.61■■□□□ 1.05
C6orf48-204ENST00000375639 SALL3Q9BXA9 1300 aa21.61■■□□□ 1.05
C6orf48-204ENST00000375639 ATP5JP18859 108 aa21.61■■□□□ 1.05
C6orf48-204ENST00000375639 PDE4AP27815 886 aa21.61■■□□□ 1.05
C6orf48-204ENST00000375639 DPY19L2Q6NUT2 758 aa21.61■■□□□ 1.05
C6orf48-204ENST00000375639 PI16Q6UXB8 463 aa21.61■■□□□ 1.05
C6orf48-204ENST00000375639 TNS4Q8IZW8 715 aa21.61■■□□□ 1.05
C6orf48-204ENST00000375639 SPATA5Q8NB90 893 aa21.61■■□□□ 1.05
C6orf48-204ENST00000375639 BOLA2Q9H3K6 86 aa21.61■■□□□ 1.05
C6orf48-204ENST00000375639 PDE1AP54750 535 aa21.6■■□□□ 1.05
C6orf48-204ENST00000375639 DACT2Q5SW24 774 aa21.6■■□□□ 1.05
C6orf48-204ENST00000375639 WDR66Q8TBY9 1149 aa21.6■■□□□ 1.05
C6orf48-204ENST00000375639 MXD3Q9BW11 206 aa21.6■■□□□ 1.05
C6orf48-204ENST00000375639 COL1A1P02452 1464 aaPredicted RBP21.59■■□□□ 1.05
C6orf48-204ENST00000375639 MYH13Q9UKX3 1938 aa21.59■■□□□ 1.05
C6orf48-204ENST00000375639 ERC2O15083 957 aa21.59■■□□□ 1.05
C6orf48-204ENST00000375639 ZBTB22O15209 634 aa21.59■■□□□ 1.05
C6orf48-204ENST00000375639 DDNO94850 711 aaPredicted RBP21.59■■□□□ 1.05
C6orf48-204ENST00000375639 VIL1P09327 827 aaKnown RBP21.59■■□□□ 1.05
C6orf48-204ENST00000375639 ZAP70P43403 619 aa21.59■■□□□ 1.05
C6orf48-204ENST00000375639 MFSD14BQ5SR56 506 aa21.59■■□□□ 1.05
C6orf48-204ENST00000375639 RSBN1LQ6PCB5 846 aaPredicted RBP21.59■■□□□ 1.05
C6orf48-204ENST00000375639 PLEKHM2Q8IWE5 1019 aa21.59■■□□□ 1.05
C6orf48-204ENST00000375639 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.59■■□□□ 1.05
C6orf48-204ENST00000375639 DNAJC2Q99543 621 aaKnown RBP21.59■■□□□ 1.05
C6orf48-204ENST00000375639 STAP2Q9UGK3 403 aa21.59■■□□□ 1.05
C6orf48-204ENST00000375639 ZBTB12Q9Y330 459 aaPredicted RBP21.59■■□□□ 1.05
C6orf48-204ENST00000375639 GPC2Q8N158 579 aa21.58■■□□□ 1.05
C6orf48-204ENST00000375639 TBC1D22AQ8WUA7 517 aa21.58■■□□□ 1.05
C6orf48-204ENST00000375639 NMRK2Q9NPI5 230 aa21.58■■□□□ 1.05
C6orf48-204ENST00000375639 NDUFB9Q9Y6M9 179 aa21.58■■□□□ 1.05
C6orf48-204ENST00000375639 PDS5AQ29RF7 1337 aaKnown RBP21.57■■□□□ 1.04
C6orf48-204ENST00000375639 GLRX3O76003 335 aaKnown RBP21.57■■□□□ 1.04
C6orf48-204ENST00000375639 HTRA3P83110 453 aa21.57■■□□□ 1.04
C6orf48-204ENST00000375639 SKAP1Q86WV1 359 aa21.57■■□□□ 1.04
C6orf48-204ENST00000375639 PI4K2BQ8TCG2 481 aa21.57■■□□□ 1.04
C6orf48-204ENST00000375639 ABCF2Q9UG63 623 aa21.57■■□□□ 1.04
C6orf48-204ENST00000375639 GLTPD2A6NH11 291 aa21.56■■□□□ 1.04
C6orf48-204ENST00000375639 GMPSP49915 693 aaPredicted RBP21.56■■□□□ 1.04
C6orf48-204ENST00000375639 FKBP1AP62942 108 aaKnown RBP21.56■■□□□ 1.04
C6orf48-204ENST00000375639 TBC1D9Q6ZT07 1266 aa21.56■■□□□ 1.04
C6orf48-204ENST00000375639 CERS5Q8N5B7 392 aa21.56■■□□□ 1.04
C6orf48-204ENST00000375639 RBM46Q8TBY0 533 aaKnown RBP21.56■■□□□ 1.04
C6orf48-204ENST00000375639 HAUS7Q99871 368 aa21.56■■□□□ 1.04
C6orf48-204ENST00000375639 PSME4Q14997 1843 aa21.56■■□□□ 1.04
C6orf48-204ENST00000375639 MYO3BQ8WXR4 1341 aa21.55■■□□□ 1.04
C6orf48-204ENST00000375639 AKAP11Q9UKA4 1901 aa21.55■■□□□ 1.04
C6orf48-204ENST00000375639 F8W031 263 aaPredicted RBP21.55■■□□□ 1.04
C6orf48-204ENST00000375639 CYP2E1P05181 493 aaPredicted RBP21.55■■□□□ 1.04
C6orf48-204ENST00000375639 ZGPATQ8N5A5 531 aaKnown RBP21.55■■□□□ 1.04
C6orf48-204ENST00000375639 AGBL3Q8NEM8 1001 aa21.55■■□□□ 1.04
C6orf48-204ENST00000375639 GOLIM4O00461 696 aa21.54■■□□□ 1.04
C6orf48-204ENST00000375639 RPS12P25398 132 aaKnown RBP21.54■■□□□ 1.04
C6orf48-204ENST00000375639 RGS3P49796 1198 aa21.54■■□□□ 1.04
C6orf48-204ENST00000375639 KIAA0825Q8IV33 1275 aa21.54■■□□□ 1.04
C6orf48-204ENST00000375639 EDC3Q96F86 508 aaKnown RBP21.54■■□□□ 1.04
C6orf48-204ENST00000375639 OSBPL3Q9H4L5 887 aa21.54■■□□□ 1.04
C6orf48-204ENST00000375639 ANTXR1Q9H6X2 564 aa21.54■■□□□ 1.04
C6orf48-204ENST00000375639 AOX1Q06278 1338 aa21.54■■□□□ 1.04
C6orf48-204ENST00000375639 SALL1Q9NSC2 1324 aa21.54■■□□□ 1.04
C6orf48-204ENST00000375639 MAP4K4O95819 1239 aaPredicted RBP21.53■■□□□ 1.04
C6orf48-204ENST00000375639 LDHBP07195 334 aaKnown RBP21.53■■□□□ 1.04
C6orf48-204ENST00000375639 GRIK5Q16478 980 aa21.53■■□□□ 1.04
C6orf48-204ENST00000375639 SPTY2D1Q68D10 685 aaPredicted RBP21.53■■□□□ 1.04
C6orf48-204ENST00000375639 GMLQ99445 158 aa21.53■■□□□ 1.04
C6orf48-204ENST00000375639 PAG1Q9NWQ8 432 aa21.53■■□□□ 1.04
C6orf48-204ENST00000375639 LRP2BPQ9P2M1 347 aa21.53■■□□□ 1.04
C6orf48-204ENST00000375639 PRDX5P30044 214 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms