RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 TPM4P67936 248 aa13.68□□□□□ -0.22
MCF2L-202ENST00000375597 CARD6Q9BX69 1037 aa13.68□□□□□ -0.22
MCF2L-202ENST00000375597 HMG20BQ9P0W2 317 aa13.68□□□□□ -0.22
MCF2L-202ENST00000375597 USP31Q70CQ4 1352 aa13.68□□□□□ -0.22
MCF2L-202ENST00000375597 ZNF202O95125 648 aa13.68□□□□□ -0.22
MCF2L-202ENST00000375597 UBASH3AP57075 661 aa13.68□□□□□ -0.22
MCF2L-202ENST00000375597 AMOTQ4VCS5 1084 aa13.68□□□□□ -0.22
MCF2L-202ENST00000375597 DHX40Q8IX18 779 aaKnown RBP13.68□□□□□ -0.22
MCF2L-202ENST00000375597 KBTBD3Q8NAB2 608 aa13.68□□□□□ -0.22
MCF2L-202ENST00000375597 KCNJ14Q9UNX9 436 aa13.68□□□□□ -0.22
MCF2L-202ENST00000375597 KIF28PB7ZC32 967 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 AFMP43652 599 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 IQCB1Q15051 598 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 PDIA6Q15084 440 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 TOM1L2Q6ZVM7 507 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 UBXN4Q92575 508 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 SLC26A6Q9BXS9 759 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 LZTFL1Q9NQ48 299 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 CNNM1Q9NRU3 951 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 MAST3O60307 1309 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 TECPR2O15040 1411 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 GNG11P61952 73 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 ALG1Q9BT22 464 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 CTNNA3Q9UI47 895 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 IMMTQ16891 758 aaKnown RBP13.67□□□□□ -0.22
MCF2L-202ENST00000375597 METTL24Q5JXM2 366 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 NEK11Q8NG66 645 aa13.67□□□□□ -0.22
MCF2L-202ENST00000375597 PUS7LQ9H0K6 701 aaKnown RBP13.67□□□□□ -0.22
MCF2L-202ENST00000375597 ZSCAN16Q9H4T2 348 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-202ENST00000375597 PXDNQ92626 1479 aa13.66□□□□□ -0.22
MCF2L-202ENST00000375597 ZNF213O14771 459 aa13.66□□□□□ -0.22
MCF2L-202ENST00000375597 PHACTR2O75167 634 aa13.66□□□□□ -0.22
MCF2L-202ENST00000375597 SNRPA1P09661 255 aaKnown RBP13.66□□□□□ -0.22
MCF2L-202ENST00000375597 ATP5JP18859 108 aa13.66□□□□□ -0.22
MCF2L-202ENST00000375597 SYKP43405 635 aa13.66□□□□□ -0.22
MCF2L-202ENST00000375597 IRX2Q9BZI1 471 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-202ENST00000375597 PUF60Q9UHX1 559 aaKnown RBP13.66□□□□□ -0.22
MCF2L-202ENST00000375597 SLU7O95391 586 aaKnown RBP13.66□□□□□ -0.22
MCF2L-202ENST00000375597 FGAP02671 866 aa13.66□□□□□ -0.22
MCF2L-202ENST00000375597 TFRCP02786 760 aaKnown RBP13.66□□□□□ -0.22
MCF2L-202ENST00000375597 CCDC158Q5M9N0 1113 aa13.66□□□□□ -0.22
MCF2L-202ENST00000375597 KCNH5Q8NCM2 988 aa13.66□□□□□ -0.22
MCF2L-202ENST00000375597 PFKFB1P16118 471 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 SLC9C2Q5TAH2 1124 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 MIGA1Q8NAN2 632 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 MAPK8IP1Q9UQF2 711 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 JAG2Q9Y219 1238 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 FKBP15Q5T1M5 1219 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 KRT222Q8N1A0 295 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 OGFRQ9NZT2 677 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 TBX22Q9Y458 520 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 PAXBP1Q9Y5B6 917 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 TOP1P11387 765 aaKnown RBP13.65□□□□□ -0.22
MCF2L-202ENST00000375597 FANCCQ00597 558 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 CTDSPL2Q05D32 466 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 TRIM29Q14134 588 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 ARMCX5Q6P1M9 558 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 CNNM3Q8NE01 707 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 SIRT1Q96EB6 747 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 SLC52A2Q9HAB3 445 aa13.65□□□□□ -0.22
MCF2L-202ENST00000375597 MTX1Q13505 466 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 SMYD4Q8IYR2 804 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-202ENST00000375597 NKX2-3Q8TAU0 364 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 FANCLQ9NW38 375 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 FAM170AA1A519 330 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 MINDY4BA8MYZ0 360 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 CCZ1BP86790 482 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 CCZ1P86791 482 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-202ENST00000375597 PPP1R13BQ96KQ4 1090 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 GDAP1L1Q96MZ0 367 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 CHMP4AQ9BY43 222 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 CARMIL3Q8ND23 1372 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 ELP1O95163 1332 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 RNF113AO15541 343 aaKnown RBP13.64□□□□□ -0.23
MCF2L-202ENST00000375597 PFKFB2O60825 505 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 FDPSP14324 419 aaKnown RBP13.64□□□□□ -0.23
MCF2L-202ENST00000375597 ERCC3P19447 782 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 ILDR1Q86SU0 546 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-202ENST00000375597 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-202ENST00000375597 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
MCF2L-202ENST00000375597 METAP2P50579 478 aaKnown RBP eCLIP13.63□□□□□ -0.23
MCF2L-202ENST00000375597 E4F1Q66K89 784 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-202ENST00000375597 OLFM4Q6UX06 510 aa13.63□□□□□ -0.23
MCF2L-202ENST00000375597 ANKRD7Q92527 254 aa13.63□□□□□ -0.23
MCF2L-202ENST00000375597 HAUS7Q99871 368 aa13.63□□□□□ -0.23
MCF2L-202ENST00000375597 CWC25Q9NXE8 425 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-202ENST00000375597 NPHP4O75161 1426 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-202ENST00000375597 WDHD1O75717 1129 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-202ENST00000375597 MCM6Q14566 821 aa13.63□□□□□ -0.23
MCF2L-202ENST00000375597 LDHAL6AQ6ZMR3 332 aa13.63□□□□□ -0.23
MCF2L-202ENST00000375597 XAGE2Q96GT9 111 aa13.63□□□□□ -0.23
MCF2L-202ENST00000375597 RABEP2Q9H5N1 569 aa13.63□□□□□ -0.23
MCF2L-202ENST00000375597 NALCNQ8IZF0 1738 aa13.63□□□□□ -0.23
MCF2L-202ENST00000375597 ANKRD65E5RJM6 399 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 GPAA1O43292 621 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 MYSM1Q5VVJ2 828 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 ZNF397Q8NF99 534 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-202ENST00000375597 ABCF2Q9UG63 623 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 TOPAZ1Q8N9V7 1692 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms