RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 FOXP2O15409 715 aa20.12■□□□□ 0.81
PTPN20-203ENST00000374342 TM4SF1P30408 202 aa20.12■□□□□ 0.81
PTPN20-203ENST00000374342 ZNF827Q17R98 1081 aa20.12■□□□□ 0.81
PTPN20-203ENST00000374342 ZSCAN31Q96LW9 406 aaPredicted RBP20.12■□□□□ 0.81
PTPN20-203ENST00000374342 CHD4Q14839 1912 aa20.11■□□□□ 0.81
PTPN20-203ENST00000374342 ST5P78524 1137 aa20.11■□□□□ 0.81
PTPN20-203ENST00000374342 TTLL5Q6EMB2 1281 aa20.11■□□□□ 0.81
PTPN20-203ENST00000374342 CCDC83Q8IWF9 413 aa20.11■□□□□ 0.81
PTPN20-203ENST00000374342 SH2B1Q9NRF2 756 aaPredicted RBP20.11■□□□□ 0.81
PTPN20-203ENST00000374342 SERPINB2P05120 415 aa20.1■□□□□ 0.81
PTPN20-203ENST00000374342 MAP3K12Q12852 859 aa20.1■□□□□ 0.81
PTPN20-203ENST00000374342 ANKRD1Q15327 319 aa20.1■□□□□ 0.81
PTPN20-203ENST00000374342 MAGEB6Q8N7X4 407 aa20.1■□□□□ 0.81
PTPN20-203ENST00000374342 ANKRD2Q9GZV1 360 aa20.1■□□□□ 0.81
PTPN20-203ENST00000374342 GNL3LQ9NVN8 582 aaKnown RBP20.1■□□□□ 0.81
PTPN20-203ENST00000374342 TPCN1Q9ULQ1 816 aa20.1■□□□□ 0.81
PTPN20-203ENST00000374342 MAST2Q6P0Q8 1798 aa20.1■□□□□ 0.81
PTPN20-203ENST00000374342 TCRBV5S4A2TA0A5A2 114 aa20.1■□□□□ 0.81
PTPN20-203ENST00000374342 HMGB2P26583 209 aaKnown RBP20.1■□□□□ 0.81
PTPN20-203ENST00000374342 TOB2Q14106 344 aaPredicted RBP20.1■□□□□ 0.81
PTPN20-203ENST00000374342 CAVIN4Q5BKX8 364 aa20.1■□□□□ 0.81
PTPN20-203ENST00000374342 VPS37DQ86XT2 251 aa20.1■□□□□ 0.81
PTPN20-203ENST00000374342 TFCP2L1Q9NZI6 479 aa20.1■□□□□ 0.81
PTPN20-203ENST00000374342 ANKRD31Q8N7Z5 1873 aa20.09■□□□□ 0.81
PTPN20-203ENST00000374342 PLSCR1O15162 318 aa20.09■□□□□ 0.81
PTPN20-203ENST00000374342 ME3Q16798 604 aa20.09■□□□□ 0.81
PTPN20-203ENST00000374342 ALDH8A1Q9H2A2 487 aaPredicted RBP20.09■□□□□ 0.81
PTPN20-203ENST00000374342 CTNNA3Q9UI47 895 aa20.09■□□□□ 0.81
PTPN20-203ENST00000374342 ZDHHC9Q9Y397 364 aa20.09■□□□□ 0.81
PTPN20-203ENST00000374342 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.09■□□□□ 0.81
PTPN20-203ENST00000374342 KLRK1P26718 216 aa20.08■□□□□ 0.81
PTPN20-203ENST00000374342 DDR1Q08345 913 aa20.08■□□□□ 0.81
PTPN20-203ENST00000374342 GRAPQ13588 217 aa20.08■□□□□ 0.81
PTPN20-203ENST00000374342 GRAPLQ8TC17 118 aaPredicted RBP20.08■□□□□ 0.81
PTPN20-203ENST00000374342 RPGRQ92834 1020 aaKnown RBP20.08■□□□□ 0.81
PTPN20-203ENST00000374342 E7EWF7 191 aa20.08■□□□□ 0.8
PTPN20-203ENST00000374342 HAND2P61296 217 aa20.08■□□□□ 0.8
PTPN20-203ENST00000374342 IMMTQ16891 758 aaKnown RBP20.08■□□□□ 0.8
PTPN20-203ENST00000374342 FOXD4L5Q5VV16 416 aaPredicted RBP20.08■□□□□ 0.8
PTPN20-203ENST00000374342 FOXD4L4Q8WXT5 416 aaPredicted RBP20.08■□□□□ 0.8
PTPN20-203ENST00000374342 AIDAQ96BJ3 306 aa20.08■□□□□ 0.8
PTPN20-203ENST00000374342 CACNA1SQ13698 1873 aa20.07■□□□□ 0.8
PTPN20-203ENST00000374342 BAG4O95429 457 aaKnown RBP20.07■□□□□ 0.8
PTPN20-203ENST00000374342 HMGB1P09429 215 aaKnown RBP20.07■□□□□ 0.8
PTPN20-203ENST00000374342 ST3GAL1Q11201 340 aa20.07■□□□□ 0.8
PTPN20-203ENST00000374342 Q6ZUG5 572 aa20.07■□□□□ 0.8
PTPN20-203ENST00000374342 NECAB1Q8N987 351 aa20.07■□□□□ 0.8
PTPN20-203ENST00000374342 LRP2BPQ9P2M1 347 aa20.07■□□□□ 0.8
PTPN20-203ENST00000374342 SMC3Q9UQE7 1217 aa20.07■□□□□ 0.8
PTPN20-203ENST00000374342 NRXN2Q9P2S2 1712 aa20.07■□□□□ 0.8
PTPN20-203ENST00000374342 FGAP02671 866 aa20.06■□□□□ 0.8
PTPN20-203ENST00000374342 SLC51AQ86UW1 340 aa20.06■□□□□ 0.8
PTPN20-203ENST00000374342 FAM84BQ96KN1 310 aaPredicted RBP20.06■□□□□ 0.8
PTPN20-203ENST00000374342 CCDC88AQ3V6T2 1871 aa20.06■□□□□ 0.8
PTPN20-203ENST00000374342 POLRMTO00411 1230 aaKnown RBP20.06■□□□□ 0.8
PTPN20-203ENST00000374342 MBD4O95243 580 aa20.06■□□□□ 0.8
PTPN20-203ENST00000374342 CLEC17AQ6ZS10 378 aa20.06■□□□□ 0.8
PTPN20-203ENST00000374342 AKT1S1Q96B36 256 aa20.06■□□□□ 0.8
PTPN20-203ENST00000374342 LRRC2Q9BYS8 371 aa20.06■□□□□ 0.8
PTPN20-203ENST00000374342 BRD1O95696 1058 aa20.05■□□□□ 0.8
PTPN20-203ENST00000374342 FGD1P98174 961 aa20.05■□□□□ 0.8
PTPN20-203ENST00000374342 ABCF2Q9UG63 623 aa20.05■□□□□ 0.8
PTPN20-203ENST00000374342 LRRC37AA6NMS7 1700 aa20.04■□□□□ 0.8
PTPN20-203ENST00000374342 GOLGA6L22H0YM25 854 aa20.04■□□□□ 0.8
PTPN20-203ENST00000374342 APPP05067 770 aa20.04■□□□□ 0.8
PTPN20-203ENST00000374342 DHX32Q7L7V1 743 aaKnown RBP20.04■□□□□ 0.8
PTPN20-203ENST00000374342 DENND2AQ9ULE3 1009 aa20.04■□□□□ 0.8
PTPN20-203ENST00000374342 DEKP35659 375 aaKnown RBP20.04■□□□□ 0.8
PTPN20-203ENST00000374342 CRY2Q49AN0 593 aa20.04■□□□□ 0.8
PTPN20-203ENST00000374342 FBXO33Q7Z6M2 555 aa20.04■□□□□ 0.8
PTPN20-203ENST00000374342 ARMT1Q9H993 441 aa20.04■□□□□ 0.8
PTPN20-203ENST00000374342 RAI14Q9P0K7 980 aa20.04■□□□□ 0.8
PTPN20-203ENST00000374342 ANKIB1Q9P2G1 1089 aa20.04■□□□□ 0.8
PTPN20-203ENST00000374342 TIAM2Q8IVF5 1701 aa20.03■□□□□ 0.8
PTPN20-203ENST00000374342 STK3Q13188 491 aa20.03■□□□□ 0.8
PTPN20-203ENST00000374342 COL23A1Q86Y22 540 aaPredicted RBP20.03■□□□□ 0.8
PTPN20-203ENST00000374342 BRF1Q92994 677 aa20.03■□□□□ 0.8
PTPN20-203ENST00000374342 STRBPQ96SI9 672 aaKnown RBP20.03■□□□□ 0.8
PTPN20-203ENST00000374342 COL11A2P13942 1736 aaPredicted RBP20.02■□□□□ 0.8
PTPN20-203ENST00000374342 TRAK2O60296 914 aa20.02■□□□□ 0.8
PTPN20-203ENST00000374342 DTNBO60941 627 aa20.02■□□□□ 0.8
PTPN20-203ENST00000374342 GJB2P29033 226 aa20.02■□□□□ 0.8
PTPN20-203ENST00000374342 HIBADHP31937 336 aaKnown RBP20.02■□□□□ 0.8
PTPN20-203ENST00000374342 RGS17Q9UGC6 210 aaPredicted RBP20.02■□□□□ 0.8
PTPN20-203ENST00000374342 ZNF213O14771 459 aa20.02■□□□□ 0.79
PTPN20-203ENST00000374342 SEMA3EO15041 775 aa20.02■□□□□ 0.79
PTPN20-203ENST00000374342 PTMSP20962 102 aa20.02■□□□□ 0.79
PTPN20-203ENST00000374342 MCTP1Q6DN14 999 aa20.02■□□□□ 0.79
PTPN20-203ENST00000374342 POTEAQ6S8J7 498 aa20.02■□□□□ 0.79
PTPN20-203ENST00000374342 RBM17Q96I25 401 aaKnown RBP20.02■□□□□ 0.79
PTPN20-203ENST00000374342 KIAA1551Q9HCM1 1747 aa20.01■□□□□ 0.79
PTPN20-203ENST00000374342 XDHP47989 1333 aa20.01■□□□□ 0.79
PTPN20-203ENST00000374342 WDR33Q9C0J8 1336 aaKnown RBP20.01■□□□□ 0.79
PTPN20-203ENST00000374342 GSE1Q14687 1217 aa20.01■□□□□ 0.79
PTPN20-203ENST00000374342 LCORLQ8N3X6 602 aa20.01■□□□□ 0.79
PTPN20-203ENST00000374342 MIGA1Q8NAN2 632 aa20.01■□□□□ 0.79
PTPN20-203ENST00000374342 CYP7A1P22680 504 aa20■□□□□ 0.79
PTPN20-203ENST00000374342 EXOSC10Q01780 885 aaKnown RBP20■□□□□ 0.79
PTPN20-203ENST00000374342 CHST3Q7LGC8 479 aa20■□□□□ 0.79
PTPN20-203ENST00000374342 IRS2Q9Y4H2 1338 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms