RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 WDR33Q9C0J8 1336 aaKnown RBP14.99□□□□□ -0.01
PRPF4-202ENST00000374199 IGHMBP2P38935 993 aaKnown RBP14.98□□□□□ -0.01
PRPF4-202ENST00000374199 SMARCC2Q8TAQ2 1214 aa14.98□□□□□ -0.01
PRPF4-202ENST00000374199 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.98□□□□□ -0.013e-7■■■■■ 42.3
PRPF4-202ENST00000374199 RTCBQ9Y3I0 505 aaKnown RBP14.98□□□□□ -0.01
PRPF4-202ENST00000374199 E7EWF7 191 aa14.98□□□□□ -0.01
PRPF4-202ENST00000374199 GTF3C6Q969F1 213 aa14.98□□□□□ -0.01
PRPF4-202ENST00000374199 FOCADQ5VW36 1801 aa14.98□□□□□ -0.01
PRPF4-202ENST00000374199 KLRG2A4D1S0 409 aaPredicted RBP14.98□□□□□ -0.01
PRPF4-202ENST00000374199 CRY2Q49AN0 593 aa14.98□□□□□ -0.01
PRPF4-202ENST00000374199 DHX32Q7L7V1 743 aaKnown RBP14.98□□□□□ -0.01
PRPF4-202ENST00000374199 MINPP1Q9UNW1 487 aa14.98□□□□□ -0.01
PRPF4-202ENST00000374199 GNPATO15228 680 aa14.97□□□□□ -0.01
PRPF4-202ENST00000374199 PDE6AP16499 860 aa14.97□□□□□ -0.01
PRPF4-202ENST00000374199 FKBP4Q02790 459 aaKnown RBP eCLIP14.97□□□□□ -0.01
PRPF4-202ENST00000374199 FAM196AQ6ZSG2 479 aa14.97□□□□□ -0.01
PRPF4-202ENST00000374199 C15orf52Q6ZUT6 534 aaKnown RBP14.97□□□□□ -0.01
PRPF4-202ENST00000374199 MB21D2Q8IYB1 491 aaPredicted RBP14.97□□□□□ -0.01
PRPF4-202ENST00000374199 SRP68Q9UHB9 627 aaKnown RBP14.97□□□□□ -0.01
PRPF4-202ENST00000374199 CDK5RAP2Q96SN8 1893 aa14.97□□□□□ -0.01
PRPF4-202ENST00000374199 A0A0G2JLW4 131 aa14.97□□□□□ -0.01
PRPF4-202ENST00000374199 KCNQ4P56696 695 aa14.97□□□□□ -0.01
PRPF4-202ENST00000374199 COL11A2P13942 1736 aaPredicted RBP14.97□□□□□ -0.01
PRPF4-202ENST00000374199 SEMA3EO15041 775 aa14.96□□□□□ -0.01
PRPF4-202ENST00000374199 PFKFB2O60825 505 aa14.96□□□□□ -0.01
PRPF4-202ENST00000374199 SYT1P21579 422 aa14.96□□□□□ -0.01
PRPF4-202ENST00000374199 FBXO33Q7Z6M2 555 aa14.96□□□□□ -0.01
PRPF4-202ENST00000374199 MPHOSPH8Q99549 860 aa14.96□□□□□ -0.01
PRPF4-202ENST00000374199 LLPHQ9BRT6 129 aaKnown RBP14.96□□□□□ -0.01
PRPF4-202ENST00000374199 CTNNA3Q9UI47 895 aa14.96□□□□□ -0.01
PRPF4-202ENST00000374199 GPAA1O43292 621 aa14.96□□□□□ -0.01
PRPF4-202ENST00000374199 ZSCAN22P10073 491 aaPredicted RBP14.96□□□□□ -0.01
PRPF4-202ENST00000374199 MTMR6Q9Y217 621 aa14.96□□□□□ -0.01
PRPF4-202ENST00000374199 ARXQ96QS3 562 aa14.96□□□□□ -0.02
PRPF4-202ENST00000374199 STRBPQ96SI9 672 aaKnown RBP14.96□□□□□ -0.02
PRPF4-202ENST00000374199 FGAP02671 866 aa14.95□□□□□ -0.02
PRPF4-202ENST00000374199 MEX3CQ5U5Q3 659 aaKnown RBP14.95□□□□□ -0.02
PRPF4-202ENST00000374199 QTRT2Q9H974 415 aaKnown RBP14.95□□□□□ -0.02
PRPF4-202ENST00000374199 GORABQ5T7V8 394 aa14.95□□□□□ -0.02
PRPF4-202ENST00000374199 ANKRD18AQ8IVF6 992 aa14.95□□□□□ -0.02
PRPF4-202ENST00000374199 ZNF274Q96GC6 653 aaPredicted RBP14.95□□□□□ -0.02
PRPF4-202ENST00000374199 SETDB2Q96T68 719 aa14.95□□□□□ -0.02
PRPF4-202ENST00000374199 WWC3Q9ULE0 1092 aa14.95□□□□□ -0.02
PRPF4-202ENST00000374199 STX6O43752 255 aa14.94□□□□□ -0.02
PRPF4-202ENST00000374199 HMGB2P26583 209 aaKnown RBP14.94□□□□□ -0.02
PRPF4-202ENST00000374199 GPT2Q8TD30 523 aa14.94□□□□□ -0.02
PRPF4-202ENST00000374199 CELF1Q92879 486 aaKnown RBP14.94□□□□□ -0.02
PRPF4-202ENST00000374199 ZNF532Q9HCE3 1301 aa14.94□□□□□ -0.02
PRPF4-202ENST00000374199 KCNJ4P48050 445 aa14.94□□□□□ -0.02
PRPF4-202ENST00000374199 ZNF445P59923 1031 aa14.94□□□□□ -0.02
PRPF4-202ENST00000374199 ZPR1O75312 459 aa14.93□□□□□ -0.02
PRPF4-202ENST00000374199 GJB2P29033 226 aa14.93□□□□□ -0.02
PRPF4-202ENST00000374199 FAM182BQ5T319 152 aa14.93□□□□□ -0.02
PRPF4-202ENST00000374199 TPTE2Q6XPS3 522 aa14.93□□□□□ -0.02
PRPF4-202ENST00000374199 PROM2Q8N271 834 aa14.93□□□□□ -0.02
PRPF4-202ENST00000374199 F13A1P00488 732 aa14.93□□□□□ -0.02
PRPF4-202ENST00000374199 TRAPPC3LQ5T215 181 aa14.93□□□□□ -0.02
PRPF4-202ENST00000374199 SLC9C2Q5TAH2 1124 aa14.93□□□□□ -0.02
PRPF4-202ENST00000374199 Q6ZUG5 572 aa14.93□□□□□ -0.02
PRPF4-202ENST00000374199 CCDC83Q8IWF9 413 aa14.93□□□□□ -0.02
PRPF4-202ENST00000374199 GYS1P13807 737 aa14.92□□□□□ -0.02
PRPF4-202ENST00000374199 ANTXR2P58335 489 aa14.92□□□□□ -0.02
PRPF4-202ENST00000374199 NFIXQ14938 502 aa14.92□□□□□ -0.02
PRPF4-202ENST00000374199 KRT27Q7Z3Y8 459 aa14.92□□□□□ -0.02
PRPF4-202ENST00000374199 HELBQ8NG08 1087 aaPredicted RBP14.92□□□□□ -0.02
PRPF4-202ENST00000374199 GOLGA6L22H0YM25 854 aa14.92□□□□□ -0.02
PRPF4-202ENST00000374199 PLSCR1O15162 318 aa14.92□□□□□ -0.02
PRPF4-202ENST00000374199 CTDNEP1O95476 244 aa14.92□□□□□ -0.02
PRPF4-202ENST00000374199 BCAMP50895 628 aa14.92□□□□□ -0.02
PRPF4-202ENST00000374199 SMIM5Q71RC9 77 aa14.92□□□□□ -0.02
PRPF4-202ENST00000374199 FAM84BQ96KN1 310 aaPredicted RBP14.92□□□□□ -0.02
PRPF4-202ENST00000374199 EPB41L4AQ9HCS5 686 aaPredicted RBP14.92□□□□□ -0.02
PRPF4-202ENST00000374199 TTLL5Q6EMB2 1281 aa14.92□□□□□ -0.02
PRPF4-202ENST00000374199 MTA3Q9BTC8 594 aa14.92□□□□□ -0.02
PRPF4-202ENST00000374199 SMC3Q9UQE7 1217 aa14.92□□□□□ -0.02
PRPF4-202ENST00000374199 ZNF384Q8TF68 577 aa14.91□□□□□ -0.02
PRPF4-202ENST00000374199 ANKRD2Q9GZV1 360 aa14.91□□□□□ -0.02
PRPF4-202ENST00000374199 PATL2C9JE40 543 aaKnown RBP14.91□□□□□ -0.02
PRPF4-202ENST00000374199 RPS8P62241 208 aaKnown RBP14.91□□□□□ -0.02
PRPF4-202ENST00000374199 SCRN1Q12765 414 aa14.91□□□□□ -0.02
PRPF4-202ENST00000374199 MCTP1Q6DN14 999 aa14.91□□□□□ -0.02
PRPF4-202ENST00000374199 AKT1S1Q96B36 256 aa14.91□□□□□ -0.02
PRPF4-202ENST00000374199 NLRP3Q96P20 1036 aa14.91□□□□□ -0.02
PRPF4-202ENST00000374199 ANAPC4Q9UJX5 808 aa14.91□□□□□ -0.02
PRPF4-202ENST00000374199 SNAP23O00161 211 aa14.9□□□□□ -0.02
PRPF4-202ENST00000374199 HOXA10P31260 410 aaPredicted RBP14.9□□□□□ -0.02
PRPF4-202ENST00000374199 IMMTQ16891 758 aaKnown RBP14.9□□□□□ -0.02
PRPF4-202ENST00000374199 NBPF5PQ86XG9 351 aaPredicted RBP14.9□□□□□ -0.02
PRPF4-202ENST00000374199 FGRP09769 529 aa14.9□□□□□ -0.02
PRPF4-202ENST00000374199 GNAT2P19087 354 aa14.9□□□□□ -0.02
PRPF4-202ENST00000374199 GSG1L2A8MUP6 293 aa14.9□□□□□ -0.02
PRPF4-202ENST00000374199 MAP3K12Q12852 859 aa14.9□□□□□ -0.02
PRPF4-202ENST00000374199 NOL8Q76FK4 1167 aaKnown RBP14.9□□□□□ -0.02
PRPF4-202ENST00000374199 RIOK1Q9BRS2 568 aaKnown RBP14.9□□□□□ -0.02
PRPF4-202ENST00000374199 ELP1O95163 1332 aa14.89□□□□□ -0.03
PRPF4-202ENST00000374199 NECAB1Q8N987 351 aa14.89□□□□□ -0.03
PRPF4-202ENST00000374199 NSUN7Q8NE18 718 aaKnown RBP14.89□□□□□ -0.03
PRPF4-202ENST00000374199 LARP6Q9BRS8 491 aaKnown RBP14.89□□□□□ -0.03
PRPF4-202ENST00000374199 HPS5Q9UPZ3 1129 aa14.89□□□□□ -0.03
PRPF4-202ENST00000374199 TACC3Q9Y6A5 838 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms