RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 NFKBIEO00221 500 aa21.31■■□□□ 1
C9orf43-202ENST00000374165 FRAT2O75474 233 aaPredicted RBP21.31■■□□□ 1
C9orf43-202ENST00000374165 SEC24BO95487 1268 aa21.31■■□□□ 1
C9orf43-202ENST00000374165 SLFNL1Q499Z3 407 aa21.31■■□□□ 1
C9orf43-202ENST00000374165 DBNDD1Q9H9R9 158 aa21.31■■□□□ 1
C9orf43-202ENST00000374165 KCNQ5Q9NR82 932 aa21.31■■□□□ 1
C9orf43-202ENST00000374165 GNL3LQ9NVN8 582 aaKnown RBP21.31■■□□□ 1
C9orf43-202ENST00000374165 SCN9AQ15858 1988 aa21.3■■□□□ 1
C9orf43-202ENST00000374165 IL1R1P14778 569 aa21.3■■□□□ 1
C9orf43-202ENST00000374165 PIH1D3Q9NQM4 214 aaKnown RBP21.3■■□□□ 1
C9orf43-202ENST00000374165 COL4A5P29400 1685 aa21.3■■□□□ 1
C9orf43-202ENST00000374165 EYA3Q99504 573 aa21.29■■□□□ 1
C9orf43-202ENST00000374165 KIAA2012Q0VF49 1180 aa21.29■■□□□ 1
C9orf43-202ENST00000374165 GRIPAP1Q4V328 841 aa21.29■■□□□ 1
C9orf43-202ENST00000374165 SOGA3Q5TF21 947 aa21.29■■□□□ 1
C9orf43-202ENST00000374165 CHAF1AQ13111 956 aaPredicted RBP21.28■■□□□ 1
C9orf43-202ENST00000374165 KBTBD3Q8NAB2 608 aa21.28■■□□□ 1
C9orf43-202ENST00000374165 FSD1Q9BTV5 496 aa21.28■■□□□ 1
C9orf43-202ENST00000374165 PPIP5K2O43314 1243 aa21.28■■□□□ 1
C9orf43-202ENST00000374165 YBX3P16989 372 aaKnown RBP eCLIP21.28■■□□□ 1
C9orf43-202ENST00000374165 PRELPP51888 382 aa21.28■■□□□ 1
C9orf43-202ENST00000374165 COA1Q9GZY4 146 aa21.28■■□□□ 1
C9orf43-202ENST00000374165 IL25Q9H293 177 aa21.28■■□□□ 1
C9orf43-202ENST00000374165 DENND2AQ9ULE3 1009 aa21.28■■□□□ 1
C9orf43-202ENST00000374165 CCDC88AQ3V6T2 1871 aa21.27■■□□□ 1
C9orf43-202ENST00000374165 CHMLP26374 656 aa21.27■■□□□ 1
C9orf43-202ENST00000374165 RASSF7Q02833 373 aa21.27■■□□□ 1
C9orf43-202ENST00000374165 IPO9Q96P70 1041 aaKnown RBP21.27■■□□□ 1
C9orf43-202ENST00000374165 TAOK3Q9H2K8 898 aa21.27■■□□□ 1
C9orf43-202ENST00000374165 SEMA3EO15041 775 aa21.26■□□□□ 0.99
C9orf43-202ENST00000374165 SUPT20HQ8NEM7 779 aa21.26■□□□□ 0.99
C9orf43-202ENST00000374165 CDC45O75419 566 aa21.26■□□□□ 0.99
C9orf43-202ENST00000374165 ABCF2Q9UG63 623 aa21.26■□□□□ 0.99
C9orf43-202ENST00000374165 MYH7P12883 1935 aa21.26■□□□□ 0.99
C9orf43-202ENST00000374165 DOCK2Q92608 1830 aa21.25■□□□□ 0.99
C9orf43-202ENST00000374165 YDJCA8MPS7 323 aa21.24■□□□□ 0.99
C9orf43-202ENST00000374165 ECE2O60344 883 aa21.24■□□□□ 0.99
C9orf43-202ENST00000374165 IDH1O75874 414 aaKnown RBP21.24■□□□□ 0.99
C9orf43-202ENST00000374165 GTF2IP78347 998 aa21.24■□□□□ 0.99
C9orf43-202ENST00000374165 GRIK5Q16478 980 aa21.24■□□□□ 0.99
C9orf43-202ENST00000374165 FAM227BQ96M60 508 aa21.24■□□□□ 0.99
C9orf43-202ENST00000374165 G3V3G9 751 aa21.24■□□□□ 0.99
C9orf43-202ENST00000374165 DCAF8Q5TAQ9 597 aa21.24■□□□□ 0.99
C9orf43-202ENST00000374165 LARGE2Q8N3Y3 721 aa21.24■□□□□ 0.99
C9orf43-202ENST00000374165 MXD3Q9BW11 206 aa21.24■□□□□ 0.99
C9orf43-202ENST00000374165 ZBTB22O15209 634 aa21.23■□□□□ 0.99
C9orf43-202ENST00000374165 PRDX5P30044 214 aa21.23■□□□□ 0.99
C9orf43-202ENST00000374165 IARSP41252 1262 aaKnown RBP21.23■□□□□ 0.99
C9orf43-202ENST00000374165 CWC27Q6UX04 472 aaKnown RBP21.23■□□□□ 0.99
C9orf43-202ENST00000374165 PODNQ7Z5L7 613 aa21.23■□□□□ 0.99
C9orf43-202ENST00000374165 TTF1Q15361 905 aaPredicted RBP21.22■□□□□ 0.99
C9orf43-202ENST00000374165 ARHGAP27Q6ZUM4 889 aa21.22■□□□□ 0.99
C9orf43-202ENST00000374165 ZNF384Q8TF68 577 aa21.22■□□□□ 0.99
C9orf43-202ENST00000374165 SEC62Q99442 399 aaKnown RBP21.22■□□□□ 0.99
C9orf43-202ENST00000374165 PDS5AQ29RF7 1337 aaKnown RBP21.22■□□□□ 0.99
C9orf43-202ENST00000374165 TTLL5Q6EMB2 1281 aa21.22■□□□□ 0.99
C9orf43-202ENST00000374165 LRP2BPQ9P2M1 347 aa21.22■□□□□ 0.99
C9orf43-202ENST00000374165 ZNF646O15015 1829 aaPredicted RBP21.22■□□□□ 0.99
C9orf43-202ENST00000374165 A0A0D9SFI3 127 aa21.21■□□□□ 0.99
C9orf43-202ENST00000374165 SLC9C2Q5TAH2 1124 aa21.21■□□□□ 0.99
C9orf43-202ENST00000374165 SBF1O95248 1867 aa21.21■□□□□ 0.99
C9orf43-202ENST00000374165 NMIQ13287 307 aaPredicted RBP21.21■□□□□ 0.99
C9orf43-202ENST00000374165 CERS5Q8N5B7 392 aa21.21■□□□□ 0.99
C9orf43-202ENST00000374165 FBXW7Q969H0 707 aa21.21■□□□□ 0.99
C9orf43-202ENST00000374165 FAM205AQ6ZU69 1335 aa21.21■□□□□ 0.99
C9orf43-202ENST00000374165 MFSD14BQ5SR56 506 aa21.2■□□□□ 0.98
C9orf43-202ENST00000374165 WDR66Q8TBY9 1149 aa21.2■□□□□ 0.98
C9orf43-202ENST00000374165 DIAPH3Q9NSV4 1193 aa21.2■□□□□ 0.98
C9orf43-202ENST00000374165 LTBP3Q9NS15 1303 aa21.2■□□□□ 0.98
C9orf43-202ENST00000374165 VPS33BQ9H267 617 aa21.19■□□□□ 0.98
C9orf43-202ENST00000374165 SALL1Q9NSC2 1324 aa21.19■□□□□ 0.98
C9orf43-202ENST00000374165 RNF113AO15541 343 aaKnown RBP21.19■□□□□ 0.98
C9orf43-202ENST00000374165 PDE6AP16499 860 aa21.19■□□□□ 0.98
C9orf43-202ENST00000374165 MAGEB6Q8N7X4 407 aa21.19■□□□□ 0.98
C9orf43-202ENST00000374165 RAI14Q9P0K7 980 aa21.19■□□□□ 0.98
C9orf43-202ENST00000374165 TCRBV5S4A2TA0A5A2 114 aa21.18■□□□□ 0.98
C9orf43-202ENST00000374165 ADD2P35612 726 aa21.18■□□□□ 0.98
C9orf43-202ENST00000374165 MAP3K12Q12852 859 aa21.18■□□□□ 0.98
C9orf43-202ENST00000374165 ADGRA1Q86SQ6 560 aa21.18■□□□□ 0.98
C9orf43-202ENST00000374165 OSBP2Q969R2 916 aa21.18■□□□□ 0.98
C9orf43-202ENST00000374165 ESYT1Q9BSJ8 1104 aa21.18■□□□□ 0.98
C9orf43-202ENST00000374165 ZNF532Q9HCE3 1301 aa21.18■□□□□ 0.98
C9orf43-202ENST00000374165 RAD17O75943 681 aa21.17■□□□□ 0.98
C9orf43-202ENST00000374165 MECOMQ03112 1051 aa21.17■□□□□ 0.98
C9orf43-202ENST00000374165 UPF2Q9HAU5 1272 aaKnown RBP21.17■□□□□ 0.98
C9orf43-202ENST00000374165 DACT2Q5SW24 774 aa21.17■□□□□ 0.98
C9orf43-202ENST00000374165 CCDC129Q6ZRS4 1044 aa21.17■□□□□ 0.98
C9orf43-202ENST00000374165 ERICH6Q7L0X2 663 aa21.17■□□□□ 0.98
C9orf43-202ENST00000374165 ZNF589Q86UQ0 364 aaPredicted RBP21.17■□□□□ 0.98
C9orf43-202ENST00000374165 NSUN4Q96CB9 384 aaKnown RBP21.17■□□□□ 0.98
C9orf43-202ENST00000374165 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.17■□□□□ 0.98
C9orf43-202ENST00000374165 PUS7LQ9H0K6 701 aaKnown RBP21.17■□□□□ 0.98
C9orf43-202ENST00000374165 PSME4Q14997 1843 aa21.17■□□□□ 0.98
C9orf43-202ENST00000374165 SGSM2O43147 1006 aa21.16■□□□□ 0.98
C9orf43-202ENST00000374165 ZMYM1Q5SVZ6 1142 aa21.16■□□□□ 0.98
C9orf43-202ENST00000374165 NIM1KQ8IY84 436 aa21.16■□□□□ 0.98
C9orf43-202ENST00000374165 ZNRF3Q9ULT6 936 aa21.16■□□□□ 0.98
C9orf43-202ENST00000374165 RFX7Q2KHR2 1363 aa21.16■□□□□ 0.98
C9orf43-202ENST00000374165 USP17L3A6NCW0 530 aa21.16■□□□□ 0.98
C9orf43-202ENST00000374165 USP17L4A6NCW7 530 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms