RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 WWC3Q9ULE0 1092 aa23.26■■□□□ 1.31
HDAC1-201ENST00000373548 ZNF532Q9HCE3 1301 aa23.25■■□□□ 1.31
HDAC1-201ENST00000373548 FGAP02671 866 aa23.25■■□□□ 1.31
HDAC1-201ENST00000373548 BCAMP50895 628 aa23.25■■□□□ 1.31
HDAC1-201ENST00000373548 STK3Q13188 491 aa23.25■■□□□ 1.31
HDAC1-201ENST00000373548 TCRBV5S4A2TA0A5A2 114 aa23.24■■□□□ 1.31
HDAC1-201ENST00000373548 L1TD1Q5T7N2 865 aaKnown RBP23.24■■□□□ 1.31
HDAC1-201ENST00000373548 FOXD4L6Q3SYB3 417 aaPredicted RBP23.24■■□□□ 1.31
HDAC1-201ENST00000373548 FOXD4L3Q6VB84 417 aaPredicted RBP23.24■■□□□ 1.31
HDAC1-201ENST00000373548 NBPF5PQ86XG9 351 aaPredicted RBP23.24■■□□□ 1.31
HDAC1-201ENST00000373548 GPT2Q8TD30 523 aa23.24■■□□□ 1.31
HDAC1-201ENST00000373548 BRF1Q92994 677 aa23.24■■□□□ 1.31
HDAC1-201ENST00000373548 MTMR6Q9Y217 621 aa23.24■■□□□ 1.31
HDAC1-201ENST00000373548 F13A1P00488 732 aa23.23■■□□□ 1.31
HDAC1-201ENST00000373548 GTF3C6Q969F1 213 aa23.23■■□□□ 1.31
HDAC1-201ENST00000373548 BCL11BQ9C0K0 894 aaPredicted RBP23.23■■□□□ 1.31
HDAC1-201ENST00000373548 BSDC1Q9NW68 430 aaPredicted RBP23.23■■□□□ 1.31
HDAC1-201ENST00000373548 IMMTQ16891 758 aaKnown RBP23.23■■□□□ 1.31
HDAC1-201ENST00000373548 AGXT2Q9BYV1 514 aa23.23■■□□□ 1.31
HDAC1-201ENST00000373548 HAND2P61296 217 aa23.22■■□□□ 1.31
HDAC1-201ENST00000373548 CELF1Q92879 486 aaKnown RBP23.22■■□□□ 1.31
HDAC1-201ENST00000373548 QTRT2Q9H974 415 aaKnown RBP23.22■■□□□ 1.31
HDAC1-201ENST00000373548 NCLP19338 710 aaKnown RBP23.21■■□□□ 1.31
HDAC1-201ENST00000373548 FGD1P98174 961 aa23.21■■□□□ 1.31
HDAC1-201ENST00000373548 LRRC4BQ9NT99 713 aa23.21■■□□□ 1.31
HDAC1-201ENST00000373548 FAM196AQ6ZSG2 479 aa23.2■■□□□ 1.3
HDAC1-201ENST00000373548 NLRP3Q96P20 1036 aa23.2■■□□□ 1.3
HDAC1-201ENST00000373548 MINPP1Q9UNW1 487 aa23.2■■□□□ 1.3
HDAC1-201ENST00000373548 PHF14O94880 888 aa23.2■■□□□ 1.3
HDAC1-201ENST00000373548 MAP3K12Q12852 859 aa23.2■■□□□ 1.3
HDAC1-201ENST00000373548 LARP1BQ659C4 914 aaKnown RBP23.2■■□□□ 1.3
HDAC1-201ENST00000373548 CAVIN1Q6NZI2 390 aaKnown RBP23.2■■□□□ 1.3
HDAC1-201ENST00000373548 TPTE2Q6XPS3 522 aa23.2■■□□□ 1.3
HDAC1-201ENST00000373548 ISY1Q9ULR0 285 aaKnown RBP23.2■■□□□ 1.3
HDAC1-201ENST00000373548 BRWD3Q6RI45 1802 aa23.19■■□□□ 1.3
HDAC1-201ENST00000373548 WTIPA6NIX2 430 aaPredicted RBP23.19■■□□□ 1.3
HDAC1-201ENST00000373548 RFC4P35249 363 aa23.19■■□□□ 1.3
HDAC1-201ENST00000373548 UBE4AQ14139 1066 aa23.19■■□□□ 1.3
HDAC1-201ENST00000373548 TRAPPC3LQ5T215 181 aa23.19■■□□□ 1.3
HDAC1-201ENST00000373548 GAS2L3Q86XJ1 694 aa23.19■■□□□ 1.3
HDAC1-201ENST00000373548 CCDC24Q8N4L8 307 aa23.19■■□□□ 1.3
HDAC1-201ENST00000373548 MAGEB6Q8N7X4 407 aa23.19■■□□□ 1.3
HDAC1-201ENST00000373548 GDPD2Q9HCC8 539 aa23.19■■□□□ 1.3
HDAC1-201ENST00000373548 NSFL1CQ9UNZ2 370 aaKnown RBP23.19■■□□□ 1.3
HDAC1-201ENST00000373548 ZNF804BA4D1E1 1349 aa23.19■■□□□ 1.3
HDAC1-201ENST00000373548 VPS37CA5D8V6 355 aaPredicted RBP23.18■■□□□ 1.3
HDAC1-201ENST00000373548 APOBRQ0VD83 1088 aa23.18■■□□□ 1.3
HDAC1-201ENST00000373548 PFKFB2O60825 505 aa23.18■■□□□ 1.3
HDAC1-201ENST00000373548 PDCP20941 246 aa23.18■■□□□ 1.3
HDAC1-201ENST00000373548 CHST3Q7LGC8 479 aa23.18■■□□□ 1.3
HDAC1-201ENST00000373548 STRBPQ96SI9 672 aaKnown RBP23.18■■□□□ 1.3
HDAC1-201ENST00000373548 UBR3Q6ZT12 1888 aa23.17■■□□□ 1.3
HDAC1-201ENST00000373548 TNRC6CQ9HCJ0 1690 aaKnown RBP23.17■■□□□ 1.3
HDAC1-201ENST00000373548 XRCC6P12956 609 aaKnown RBP eCLIP23.17■■□□□ 1.3
HDAC1-201ENST00000373548 PDIA4P13667 645 aaKnown RBP23.17■■□□□ 1.3
HDAC1-201ENST00000373548 SCRN1Q12765 414 aa23.17■■□□□ 1.3
HDAC1-201ENST00000373548 TMEM87AQ8NBN3 555 aa23.17■■□□□ 1.3
HDAC1-201ENST00000373548 CNPY2Q9Y2B0 182 aa23.17■■□□□ 1.3
HDAC1-201ENST00000373548 ATP6V1DQ9Y5K8 247 aa23.17■■□□□ 1.3
HDAC1-201ENST00000373548 ZNF213O14771 459 aa23.17■■□□□ 1.3
HDAC1-201ENST00000373548 JAK2O60674 1132 aa23.17■■□□□ 1.3
HDAC1-201ENST00000373548 MBD3O95983 291 aa23.17■■□□□ 1.3
HDAC1-201ENST00000373548 GYG1P46976 350 aa23.17■■□□□ 1.3
HDAC1-201ENST00000373548 RPS8P62241 208 aaKnown RBP23.17■■□□□ 1.3
HDAC1-201ENST00000373548 USP48Q86UV5 1035 aa23.17■■□□□ 1.3
HDAC1-201ENST00000373548 AIDAQ96BJ3 306 aa23.17■■□□□ 1.3
HDAC1-201ENST00000373548 MB21D2Q8IYB1 491 aaPredicted RBP23.16■■□□□ 1.3
HDAC1-201ENST00000373548 FBXL16Q8N461 479 aa23.16■■□□□ 1.3
HDAC1-201ENST00000373548 NBPF3Q9H094 633 aa23.16■■□□□ 1.3
HDAC1-201ENST00000373548 RBM27Q9P2N5 1060 aaKnown RBP23.15■■□□□ 1.3
HDAC1-201ENST00000373548 BRPF3Q9ULD4 1205 aa23.15■■□□□ 1.3
HDAC1-201ENST00000373548 IQSEC3Q9UPP2 1182 aaPredicted RBP23.15■■□□□ 1.3
HDAC1-201ENST00000373548 MRE11P49959 708 aa23.15■■□□□ 1.3
HDAC1-201ENST00000373548 ZSCAN23Q3MJ62 389 aa23.15■■□□□ 1.3
HDAC1-201ENST00000373548 CDC37L1Q7L3B6 337 aa23.15■■□□□ 1.3
HDAC1-201ENST00000373548 MBD4O95243 580 aa23.14■■□□□ 1.3
HDAC1-201ENST00000373548 APPP05067 770 aa23.14■■□□□ 1.3
HDAC1-201ENST00000373548 NCOA7Q8NI08 942 aa23.14■■□□□ 1.3
HDAC1-201ENST00000373548 COL1A1P02452 1464 aaPredicted RBP23.14■■□□□ 1.3
HDAC1-201ENST00000373548 GADD45BO75293 160 aaPredicted RBP23.14■■□□□ 1.29
HDAC1-201ENST00000373548 TM4SF1P30408 202 aa23.14■■□□□ 1.29
HDAC1-201ENST00000373548 NFIXQ14938 502 aa23.14■■□□□ 1.29
HDAC1-201ENST00000373548 LLPHQ9BRT6 129 aaKnown RBP23.14■■□□□ 1.29
HDAC1-201ENST00000373548 GRPEL1Q9HAV7 217 aa23.14■■□□□ 1.29
HDAC1-201ENST00000373548 CARMIL3Q8ND23 1372 aa23.13■■□□□ 1.29
HDAC1-201ENST00000373548 ADRA2BP18089 450 aa23.13■■□□□ 1.29
HDAC1-201ENST00000373548 ZNF445P59923 1031 aa23.13■■□□□ 1.29
HDAC1-201ENST00000373548 ALX1Q15699 326 aa23.13■■□□□ 1.29
HDAC1-201ENST00000373548 SMARCC2Q8TAQ2 1214 aa23.13■■□□□ 1.29
HDAC1-201ENST00000373548 ZNF274Q96GC6 653 aaPredicted RBP23.13■■□□□ 1.29
HDAC1-201ENST00000373548 GPHNQ9NQX3 736 aaPredicted RBP23.13■■□□□ 1.29
HDAC1-201ENST00000373548 GNL3LQ9NVN8 582 aaKnown RBP23.13■■□□□ 1.29
HDAC1-201ENST00000373548 TMEM63CQ9P1W3 806 aa23.13■■□□□ 1.29
HDAC1-201ENST00000373548 PRC1O43663 620 aa23.12■■□□□ 1.29
HDAC1-201ENST00000373548 PDIA3P30101 505 aaKnown RBP23.12■■□□□ 1.29
HDAC1-201ENST00000373548 MCM5P33992 734 aa23.12■■□□□ 1.29
HDAC1-201ENST00000373548 EVCP57679 992 aa23.12■■□□□ 1.29
HDAC1-201ENST00000373548 ANTXR2P58335 489 aa23.12■■□□□ 1.29
HDAC1-201ENST00000373548 TBC1D10CQ8IV04 446 aa23.12■■□□□ 1.29
HDAC1-201ENST00000373548 ARMT1Q9H993 441 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms