RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TSPY8P0CW00 308 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 SREK1Q8WXA9 508 aaKnown RBP16.12■□□□□ 0.17
LMX1B-202ENST00000373474 PLXNC1O60486 1568 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 CALM1P0DP23 149 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 CALM2P0DP24 149 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 CALM3P0DP25 149 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 DHX58Q96C10 678 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 OGFRQ9NZT2 677 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 TRIM35Q9UPQ4 493 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 CCDC160A6NGH7 325 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 LMOD1P29536 600 aaPredicted RBP16.12■□□□□ 0.17
LMX1B-202ENST00000373474 KRT2P35908 639 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 PIP4K2BP78356 416 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 EYA1Q99502 592 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 KIF4AO95239 1232 aa16.11■□□□□ 0.17
LMX1B-202ENST00000373474 TUBBP07437 444 aa16.11■□□□□ 0.17
LMX1B-202ENST00000373474 CHRNA2Q15822 529 aa16.11■□□□□ 0.17
LMX1B-202ENST00000373474 IFNKQ9P0W0 207 aa16.11■□□□□ 0.17
LMX1B-202ENST00000373474 TRIM75PA6NK02 468 aa16.11■□□□□ 0.17
LMX1B-202ENST00000373474 PSMA7O14818 248 aa16.11■□□□□ 0.17
LMX1B-202ENST00000373474 GNAQP50148 359 aa16.11■□□□□ 0.17
LMX1B-202ENST00000373474 SLC4A8Q2Y0W8 1093 aa16.11■□□□□ 0.17
LMX1B-202ENST00000373474 IL13P35225 146 aa16.11■□□□□ 0.17
LMX1B-202ENST00000373474 MYO1BO43795 1136 aa16.11■□□□□ 0.17
LMX1B-202ENST00000373474 PRPF4BQ13523 1007 aaKnown RBP16.11■□□□□ 0.17
LMX1B-202ENST00000373474 CEP57Q86XR8 500 aa16.11■□□□□ 0.17
LMX1B-202ENST00000373474 BABAM1Q9NWV8 329 aa16.11■□□□□ 0.17
LMX1B-202ENST00000373474 EDC4Q6P2E9 1401 aaKnown RBP16.11■□□□□ 0.17
LMX1B-202ENST00000373474 ATP2C2O75185 946 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 CHST3Q7LGC8 479 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 TSNARE1Q96NA8 513 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 PPP1R1BQ9UD71 204 aaPredicted RBP16.1■□□□□ 0.17
LMX1B-202ENST00000373474 CCDC172P0C7W6 258 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 ZNF445P59923 1031 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 KRT83P78385 493 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 KIF24Q5T7B8 1368 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 SNX14Q9Y5W7 946 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 HLA-DOAP06340 250 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 HOXC9P31274 260 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 ATRIPQ8WXE1 791 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 MAGEB6P1A0A0J9YX57 407 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 HEATR3Q7Z4Q2 680 aa16.1■□□□□ 0.17
LMX1B-202ENST00000373474 OTUD7AQ8TE49 926 aaPredicted RBP16.1■□□□□ 0.17
LMX1B-202ENST00000373474 A0A1W2PRG0 241 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 SF3B2Q13435 895 aaKnown RBP16.09■□□□□ 0.17
LMX1B-202ENST00000373474 TBCAO75347 108 aaKnown RBP16.09■□□□□ 0.17
LMX1B-202ENST00000373474 G2E3Q7L622 706 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 ERMNQ8TAM6 284 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 SLC27A2O14975 620 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 RNMTO43148 476 aaKnown RBP16.09■□□□□ 0.17
LMX1B-202ENST00000373474 TACC1O75410 805 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 CCDC129Q6ZRS4 1044 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 LRRC59Q96AG4 307 aaKnown RBP16.09■□□□□ 0.17
LMX1B-202ENST00000373474 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
LMX1B-202ENST00000373474 IKBKGQ9Y6K9 419 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 ELP1O95163 1332 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 CTNNA2P26232 953 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 GRIPAP1Q4V328 841 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 SYCP3Q8IZU3 236 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 ARFGAP2Q8N6H7 521 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 SMC6Q96SB8 1091 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 SARNPP82979 210 aaKnown RBP16.09■□□□□ 0.17
LMX1B-202ENST00000373474 PPP1R14CQ8TAE6 165 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 SAMD9Q5K651 1589 aa16.09■□□□□ 0.17
LMX1B-202ENST00000373474 FAM160A1Q05DH4 1040 aa16.08■□□□□ 0.17
LMX1B-202ENST00000373474 TBC1D5Q92609 795 aa16.08■□□□□ 0.17
LMX1B-202ENST00000373474 KIAA0753Q2KHM9 967 aa16.08■□□□□ 0.16
LMX1B-202ENST00000373474 NAA16Q6N069 864 aaPredicted RBP16.08■□□□□ 0.16
LMX1B-202ENST00000373474 SYT10Q6XYQ8 523 aa16.08■□□□□ 0.16
LMX1B-202ENST00000373474 RRAGDQ9NQL2 400 aaPredicted RBP16.08■□□□□ 0.16
LMX1B-202ENST00000373474 RASAL2Q9UJF2 1139 aa16.08■□□□□ 0.16
LMX1B-202ENST00000373474 ZMYM3Q14202 1370 aa16.08■□□□□ 0.16
LMX1B-202ENST00000373474 CCDC77Q9BR77 488 aa16.08■□□□□ 0.16
LMX1B-202ENST00000373474 RBM28Q9NW13 759 aaKnown RBP16.08■□□□□ 0.16
LMX1B-202ENST00000373474 C6orf229H3BNL8 230 aa16.08■□□□□ 0.16
LMX1B-202ENST00000373474 MXRA7P84157 204 aa16.08■□□□□ 0.16
LMX1B-202ENST00000373474 SELENOOQ9BVL4 669 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 PLVAPQ9BX97 442 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 SWAP70Q9UH65 585 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 CPA1P15085 419 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 ASIC1P78348 528 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 CLSTN2Q9H4D0 955 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 BICDL2A1A5D9 508 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 ADAMTS2O95450 1211 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 PAIP2Q9BPZ3 127 aaKnown RBP16.07■□□□□ 0.16
LMX1B-202ENST00000373474 LLPHQ9BRT6 129 aaKnown RBP16.07■□□□□ 0.16
LMX1B-202ENST00000373474 STX8Q9UNK0 236 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 KIF3CO14782 793 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 KRT86O43790 486 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 CALML3P27482 149 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 MCM6Q14566 821 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 CCDC114Q96M63 670 aa16.07■□□□□ 0.16
LMX1B-202ENST00000373474 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
LMX1B-202ENST00000373474 ANAPC4Q9UJX5 808 aa16.06■□□□□ 0.16
LMX1B-202ENST00000373474 CADPS2Q86UW7 1296 aa16.06■□□□□ 0.16
LMX1B-202ENST00000373474 NFATC2IPQ8NCF5 419 aa16.06■□□□□ 0.16
LMX1B-202ENST00000373474 UTP14AQ9BVJ6 771 aaKnown RBP16.06■□□□□ 0.16
LMX1B-202ENST00000373474 STIM2Q9P246 746 aa16.06■□□□□ 0.16
LMX1B-202ENST00000373474 ABCA5Q8WWZ7 1642 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms