RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 GOLGA6L4A6NEF3 574 aa22.06■■□□□ 1.12
USP49-202ENST00000373010 HMGN5P82970 282 aaKnown RBP22.06■■□□□ 1.12
USP49-202ENST00000373010 PUM3Q15397 648 aaKnown RBP22.06■■□□□ 1.12
USP49-202ENST00000373010 MYH14Q7Z406 1995 aaKnown RBP22.06■■□□□ 1.12
USP49-202ENST00000373010 LRP5O75197 1615 aa22.05■■□□□ 1.12
USP49-202ENST00000373010 PRC1O43663 620 aa22.05■■□□□ 1.12
USP49-202ENST00000373010 TTF1Q15361 905 aaPredicted RBP22.05■■□□□ 1.12
USP49-202ENST00000373010 CAMK4Q16566 473 aa22.05■■□□□ 1.12
USP49-202ENST00000373010 MB21D2Q8IYB1 491 aaPredicted RBP22.05■■□□□ 1.12
USP49-202ENST00000373010 PGBD1Q96JS3 809 aa22.05■■□□□ 1.12
USP49-202ENST00000373010 ZSCAN16Q9H4T2 348 aaPredicted RBP22.05■■□□□ 1.12
USP49-202ENST00000373010 USP25Q9UHP3 1055 aa22.05■■□□□ 1.12
USP49-202ENST00000373010 NOL7Q9UMY1 257 aaKnown RBP22.05■■□□□ 1.12
USP49-202ENST00000373010 MROH5Q6ZUA9 1318 aa22.05■■□□□ 1.12
USP49-202ENST00000373010 SALL1Q9NSC2 1324 aa22.05■■□□□ 1.12
USP49-202ENST00000373010 CAMTA2O94983 1202 aa22.05■■□□□ 1.12
USP49-202ENST00000373010 FGFR2P21802 821 aa22.05■■□□□ 1.12
USP49-202ENST00000373010 ARID4AP29374 1257 aaPredicted RBP22.05■■□□□ 1.12
USP49-202ENST00000373010 ZSCAN25Q6NSZ9 544 aa22.05■■□□□ 1.12
USP49-202ENST00000373010 LPIN2Q92539 896 aa22.05■■□□□ 1.12
USP49-202ENST00000373010 UTP14AQ9BVJ6 771 aaKnown RBP22.05■■□□□ 1.12
USP49-202ENST00000373010 ZNF213O14771 459 aa22.04■■□□□ 1.12
USP49-202ENST00000373010 NAA16Q6N069 864 aaPredicted RBP22.04■■□□□ 1.12
USP49-202ENST00000373010 WWC3Q9ULE0 1092 aa22.04■■□□□ 1.12
USP49-202ENST00000373010 MYH15Q9Y2K3 1946 aa22.04■■□□□ 1.12
USP49-202ENST00000373010 ZNF532Q9HCE3 1301 aa22.04■■□□□ 1.12
USP49-202ENST00000373010 ANTXR2P58335 489 aa22.04■■□□□ 1.12
USP49-202ENST00000373010 CEBPZQ03701 1054 aaKnown RBP22.04■■□□□ 1.12
USP49-202ENST00000373010 NUP62CLQ9H1M0 184 aa22.04■■□□□ 1.12
USP49-202ENST00000373010 DACT1Q9NYF0 836 aa22.04■■□□□ 1.12
USP49-202ENST00000373010 MCM5P33992 734 aa22.03■■□□□ 1.12
USP49-202ENST00000373010 GUCY1B3Q02153 619 aa22.03■■□□□ 1.12
USP49-202ENST00000373010 FBXL16Q8N461 479 aa22.03■■□□□ 1.12
USP49-202ENST00000373010 AK7Q96M32 723 aa22.03■■□□□ 1.12
USP49-202ENST00000373010 NBPF3Q9H094 633 aa22.03■■□□□ 1.12
USP49-202ENST00000373010 CCDC39Q9UFE4 941 aa22.03■■□□□ 1.12
USP49-202ENST00000373010 SPATA31A5Q5VU36 1347 aa22.03■■□□□ 1.12
USP49-202ENST00000373010 SPATA31A7Q8IWB4 1347 aa22.03■■□□□ 1.12
USP49-202ENST00000373010 UQCRFS1P1P0C7P4 283 aa22.02■■□□□ 1.12
USP49-202ENST00000373010 PDE6AP16499 860 aa22.02■■□□□ 1.12
USP49-202ENST00000373010 EVCP57679 992 aa22.02■■□□□ 1.12
USP49-202ENST00000373010 RAB11FIP4Q86YS3 637 aa22.02■■□□□ 1.12
USP49-202ENST00000373010 NCOA7Q8NI08 942 aa22.02■■□□□ 1.12
USP49-202ENST00000373010 NAP1L5Q96NT1 182 aaPredicted RBP22.02■■□□□ 1.12
USP49-202ENST00000373010 DENND2AQ9ULE3 1009 aa22.02■■□□□ 1.12
USP49-202ENST00000373010 ADD1P35611 737 aaKnown RBP22.02■■□□□ 1.12
USP49-202ENST00000373010 MPHOSPH8Q99549 860 aa22.02■■□□□ 1.12
USP49-202ENST00000373010 ARAP2Q8WZ64 1704 aa22.02■■□□□ 1.12
USP49-202ENST00000373010 DDX60Q8IY21 1712 aaKnown RBP22.02■■□□□ 1.11
USP49-202ENST00000373010 FDPSP14324 419 aaKnown RBP22.01■■□□□ 1.11
USP49-202ENST00000373010 UBE3CQ15386 1083 aa22.01■■□□□ 1.11
USP49-202ENST00000373010 RALYLQ86SE5 291 aaKnown RBP22.01■■□□□ 1.11
USP49-202ENST00000373010 FTOQ9C0B1 505 aaKnown RBP eCLIP22.01■■□□□ 1.11
USP49-202ENST00000373010 KIF3AQ9Y496 699 aa22.01■■□□□ 1.11
USP49-202ENST00000373010 ATRNO75882 1429 aa22.01■■□□□ 1.11
USP49-202ENST00000373010 KLF18A0A0U1RQI7 1052 aa22.01■■□□□ 1.11
USP49-202ENST00000373010 KCNQ2O43526 872 aa22.01■■□□□ 1.11
USP49-202ENST00000373010 APPP05067 770 aa22.01■■□□□ 1.11
USP49-202ENST00000373010 MAP3K11Q16584 847 aa22.01■■□□□ 1.11
USP49-202ENST00000373010 BICD2Q8TD16 824 aa22.01■■□□□ 1.11
USP49-202ENST00000373010 NIP7Q9Y221 180 aaKnown RBP eCLIP22.01■■□□□ 1.11
USP49-202ENST00000373010 CARMIL3Q8ND23 1372 aa22.01■■□□□ 1.11
USP49-202ENST00000373010 RREB1Q92766 1687 aa22■■□□□ 1.11
USP49-202ENST00000373010 SLC5A1P13866 664 aa22■■□□□ 1.11
USP49-202ENST00000373010 CKAP2LQ8IYA6 745 aa22■■□□□ 1.11
USP49-202ENST00000373010 NKX2-3Q8TAU0 364 aa22■■□□□ 1.11
USP49-202ENST00000373010 ZKSCAN5Q9Y2L8 839 aa22■■□□□ 1.11
USP49-202ENST00000373010 TCRBV5S4A2TA0A5A2 114 aa22■■□□□ 1.11
USP49-202ENST00000373010 PTMAP06454 111 aaKnown RBP22■■□□□ 1.11
USP49-202ENST00000373010 CCDC192P0DO97 292 aa22■■□□□ 1.11
USP49-202ENST00000373010 TBC1D10CQ8IV04 446 aa22■■□□□ 1.11
USP49-202ENST00000373010 SPATA5Q8NB90 893 aa22■■□□□ 1.11
USP49-202ENST00000373010 CFAP45Q9UL16 551 aa22■■□□□ 1.11
USP49-202ENST00000373010 HPS5Q9UPZ3 1129 aa22■■□□□ 1.11
USP49-202ENST00000373010 GOLGA8BA8MQT2 603 aa21.99■■□□□ 1.11
USP49-202ENST00000373010 NR1I2O75469 434 aa21.99■■□□□ 1.11
USP49-202ENST00000373010 NTSR2O95665 410 aa21.99■■□□□ 1.11
USP49-202ENST00000373010 RASGRF1Q13972 1273 aa21.99■■□□□ 1.11
USP49-202ENST00000373010 MPNDQ8N594 471 aa21.99■■□□□ 1.11
USP49-202ENST00000373010 TNMDQ9H2S6 317 aa21.99■■□□□ 1.11
USP49-202ENST00000373010 ADCY5O95622 1261 aa21.99■■□□□ 1.11
USP49-202ENST00000373010 PARP10Q53GL7 1025 aa21.99■■□□□ 1.11
USP49-202ENST00000373010 KLHL34Q8N239 644 aa21.99■■□□□ 1.11
USP49-202ENST00000373010 LTBP4Q8N2S1 1624 aa21.99■■□□□ 1.11
USP49-202ENST00000373010 ILDR1Q86SU0 546 aaPredicted RBP21.98■■□□□ 1.11
USP49-202ENST00000373010 DDX19AQ9NUU7 478 aaKnown RBP21.98■■□□□ 1.11
USP49-202ENST00000373010 KDM4AO75164 1064 aa21.97■■□□□ 1.11
USP49-202ENST00000373010 CCDC152Q4G0S7 254 aa21.97■■□□□ 1.11
USP49-202ENST00000373010 OTUD7BQ6GQQ9 843 aa21.97■■□□□ 1.11
USP49-202ENST00000373010 USP28Q96RU2 1077 aa21.97■■□□□ 1.11
USP49-202ENST00000373010 CLSTN2Q9H4D0 955 aa21.97■■□□□ 1.11
USP49-202ENST00000373010 TYRO3Q06418 890 aa21.97■■□□□ 1.11
USP49-202ENST00000373010 CYB5R4Q7L1T6 521 aa21.97■■□□□ 1.11
USP49-202ENST00000373010 MAGEB6Q8N7X4 407 aa21.97■■□□□ 1.11
USP49-202ENST00000373010 AIDAQ96BJ3 306 aa21.97■■□□□ 1.11
USP49-202ENST00000373010 STRBPQ96SI9 672 aaKnown RBP21.97■■□□□ 1.11
USP49-202ENST00000373010 PLCB2Q00722 1185 aa21.96■■□□□ 1.11
USP49-202ENST00000373010 CHMP4CQ96CF2 233 aa21.96■■□□□ 1.11
USP49-202ENST00000373010 MRVI1Q9Y6F6 885 aa21.96■■□□□ 1.11
USP49-202ENST00000373010 AP5Z1O43299 807 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms