RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 OFD1O75665 1012 aa33.99■■■■□ 3.03
SSBP3-204ENST00000371320 EIF5P55010 431 aaKnown RBP33.99■■■■□ 3.03
SSBP3-204ENST00000371320 CCDC102BQ68D86 513 aa33.99■■■■□ 3.03
SSBP3-204ENST00000371320 MB21D2Q8IYB1 491 aaPredicted RBP33.99■■■■□ 3.03
SSBP3-204ENST00000371320 NCOA7Q8NI08 942 aa33.99■■■■□ 3.03
SSBP3-204ENST00000371320 PIH1D3Q9NQM4 214 aaKnown RBP33.99■■■■□ 3.03
SSBP3-204ENST00000371320 MROH5Q6ZUA9 1318 aa33.98■■■■□ 3.03
SSBP3-204ENST00000371320 PUM3Q15397 648 aaKnown RBP33.98■■■■□ 3.03
SSBP3-204ENST00000371320 RALYLQ86SE5 291 aaKnown RBP33.98■■■■□ 3.03
SSBP3-204ENST00000371320 AHDC1Q5TGY3 1603 aaPredicted RBP33.98■■■■□ 3.03
SSBP3-204ENST00000371320 UQCRFS1P1P0C7P4 283 aa33.97■■■■□ 3.03
SSBP3-204ENST00000371320 PHKA1P46020 1223 aa33.97■■■■□ 3.03
SSBP3-204ENST00000371320 DDB1Q16531 1140 aa33.97■■■■□ 3.03
SSBP3-204ENST00000371320 LPIN2Q92539 896 aa33.97■■■■□ 3.03
SSBP3-204ENST00000371320 CLSTN2Q9H4D0 955 aa33.97■■■■□ 3.03
SSBP3-204ENST00000371320 CCDC87Q9NVE4 849 aa33.97■■■■□ 3.03
SSBP3-204ENST00000371320 PPFIA3O75145 1194 aa33.97■■■■□ 3.03
SSBP3-204ENST00000371320 IDH1O75874 414 aaKnown RBP33.97■■■■□ 3.03
SSBP3-204ENST00000371320 ARID4AP29374 1257 aaPredicted RBP33.97■■■■□ 3.03
SSBP3-204ENST00000371320 ADD1P35611 737 aaKnown RBP33.97■■■■□ 3.03
SSBP3-204ENST00000371320 INTS5Q6P9B9 1019 aaKnown RBP33.97■■■■□ 3.03
SSBP3-204ENST00000371320 DOT1LQ8TEK3 1739 aa33.96■■■■□ 3.03
SSBP3-204ENST00000371320 AKAP11Q9UKA4 1901 aa33.96■■■■□ 3.03
SSBP3-204ENST00000371320 TYRO3Q06418 890 aa33.96■■■■□ 3.03
SSBP3-204ENST00000371320 UBE3CQ15386 1083 aa33.96■■■■□ 3.03
SSBP3-204ENST00000371320 PDZRN4Q6ZMN7 1036 aaPredicted RBP33.96■■■■□ 3.03
SSBP3-204ENST00000371320 NR1I2O75469 434 aa33.95■■■■□ 3.03
SSBP3-204ENST00000371320 CEBPZQ03701 1054 aaKnown RBP33.95■■■■□ 3.03
SSBP3-204ENST00000371320 SUSD4Q5VX71 490 aa33.95■■■■□ 3.03
SSBP3-204ENST00000371320 HELBQ8NG08 1087 aaPredicted RBP33.95■■■■□ 3.03
SSBP3-204ENST00000371320 MYH7P12883 1935 aa33.95■■■■□ 3.03
SSBP3-204ENST00000371320 CARMIL3Q8ND23 1372 aa33.95■■■■□ 3.03
SSBP3-204ENST00000371320 WNK3Q9BYP7 1800 aa33.95■■■■□ 3.03
SSBP3-204ENST00000371320 CKAP2LQ8IYA6 745 aa33.95■■■■□ 3.03
SSBP3-204ENST00000371320 ATRNO75882 1429 aa33.94■■■■□ 3.02
SSBP3-204ENST00000371320 ADAMTS2O95450 1211 aa33.94■■■■□ 3.02
SSBP3-204ENST00000371320 SPATA31A1Q5TZJ5 1347 aa33.94■■■■□ 3.02
SSBP3-204ENST00000371320 KLF18A0A0U1RQI7 1052 aa33.94■■■■□ 3.02
SSBP3-204ENST00000371320 FGFR2P21802 821 aa33.94■■■■□ 3.02
SSBP3-204ENST00000371320 ATP6V1AP38606 617 aa33.94■■■■□ 3.02
SSBP3-204ENST00000371320 PLCB2Q00722 1185 aa33.94■■■■□ 3.02
SSBP3-204ENST00000371320 ATL3Q6DD88 541 aa33.94■■■■□ 3.02
SSBP3-204ENST00000371320 RCOR1Q9UKL0 485 aa33.94■■■■□ 3.02
SSBP3-204ENST00000371320 THRAP3Q9Y2W1 955 aaKnown RBP33.94■■■■□ 3.02
SSBP3-204ENST00000371320 MRVI1Q9Y6F6 885 aa33.94■■■■□ 3.02
SSBP3-204ENST00000371320 DHX16O60231 1041 aaKnown RBP33.93■■■■□ 3.02
SSBP3-204ENST00000371320 CRKLP46109 303 aaKnown RBP33.93■■■■□ 3.02
SSBP3-204ENST00000371320 ANTXR2P58335 489 aa33.93■■■■□ 3.02
SSBP3-204ENST00000371320 RBM43Q6ZSC3 357 aaKnown RBP33.93■■■■□ 3.02
SSBP3-204ENST00000371320 FAM200AQ8TCP9 573 aa33.93■■■■□ 3.02
SSBP3-204ENST00000371320 ACSBG1Q96GR2 724 aa33.93■■■■□ 3.02
SSBP3-204ENST00000371320 ZNF396Q96N95 335 aaPredicted RBP33.93■■■■□ 3.02
SSBP3-204ENST00000371320 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP33.93■■■■□ 3.022e-6■■■□□ 16.3
SSBP3-204ENST00000371320 FAM177BA6PVY3 158 aa33.92■■■■□ 3.02
SSBP3-204ENST00000371320 FDPSP14324 419 aaKnown RBP33.92■■■■□ 3.02
SSBP3-204ENST00000371320 GUCY1B3Q02153 619 aa33.92■■■■□ 3.02
SSBP3-204ENST00000371320 UTP14AQ9BVJ6 771 aaKnown RBP33.92■■■■□ 3.02
SSBP3-204ENST00000371320 WDR19Q8NEZ3 1342 aa33.92■■■■□ 3.02
SSBP3-204ENST00000371320 ZNF532Q9HCE3 1301 aa33.92■■■■□ 3.02
SSBP3-204ENST00000371320 GOLGA8BA8MQT2 603 aa33.92■■■■□ 3.02
SSBP3-204ENST00000371320 PDE6AP16499 860 aa33.91■■■■□ 3.02
SSBP3-204ENST00000371320 TRDNQ13061 729 aa33.91■■■■□ 3.02
SSBP3-204ENST00000371320 SLIT2O94813 1529 aa33.91■■■■□ 3.02
SSBP3-204ENST00000371320 APPP05067 770 aa33.91■■■■□ 3.02
SSBP3-204ENST00000371320 SLC5A1P13866 664 aa33.91■■■■□ 3.02
SSBP3-204ENST00000371320 MPHOSPH8Q99549 860 aa33.91■■■■□ 3.02
SSBP3-204ENST00000371320 LRP5O75197 1615 aa33.9■■■■□ 3.02
SSBP3-204ENST00000371320 USP28Q96RU2 1077 aa33.89■■■■□ 3.02
SSBP3-204ENST00000371320 FTOQ9C0B1 505 aaKnown RBP eCLIP33.89■■■■□ 3.021e-6■■□□□ 11.8
SSBP3-204ENST00000371320 WWC3Q9ULE0 1092 aa33.89■■■■□ 3.02
SSBP3-204ENST00000371320 HPS5Q9UPZ3 1129 aa33.89■■■■□ 3.02
SSBP3-204ENST00000371320 LOC102724428A0A0B4J2F2 783 aa33.89■■■■□ 3.02
SSBP3-204ENST00000371320 SIK1P57059 783 aa33.89■■■■□ 3.02
SSBP3-204ENST00000371320 NBPF3Q9H094 633 aa33.89■■■■□ 3.02
SSBP3-204ENST00000371320 MPNDQ8N594 471 aa33.88■■■■□ 3.01
SSBP3-204ENST00000371320 PARP10Q53GL7 1025 aa33.88■■■■□ 3.01
SSBP3-204ENST00000371320 MARCH10Q8NA82 808 aaPredicted RBP33.88■■■■□ 3.01
SSBP3-204ENST00000371320 SPATA5Q8NB90 893 aa33.88■■■■□ 3.01
SSBP3-204ENST00000371320 TCRBV5S4A2TA0A5A2 114 aa33.87■■■■□ 3.01
SSBP3-204ENST00000371320 AP5Z1O43299 807 aa33.87■■■■□ 3.01
SSBP3-204ENST00000371320 CAMTA2O94983 1202 aa33.87■■■■□ 3.01
SSBP3-204ENST00000371320 CPLX1O14810 134 aa33.86■■■■□ 3.01
SSBP3-204ENST00000371320 ANO6Q4KMQ2 910 aa33.86■■■■□ 3.01
SSBP3-204ENST00000371320 SASS6Q6UVJ0 657 aa33.86■■■■□ 3.01
SSBP3-204ENST00000371320 ILDR1Q86SU0 546 aaPredicted RBP33.86■■■■□ 3.01
SSBP3-204ENST00000371320 AIDAQ96BJ3 306 aa33.86■■■■□ 3.01
SSBP3-204ENST00000371320 SEC31BQ9NQW1 1179 aa33.86■■■■□ 3.01
SSBP3-204ENST00000371320 TBC1D10CQ8IV04 446 aa33.86■■■■□ 3.01
SSBP3-204ENST00000371320 KIAA2012Q0VF49 1180 aa33.85■■■■□ 3.01
SSBP3-204ENST00000371320 CCAR1Q8IX12 1150 aaKnown RBP33.85■■■■□ 3.01
SSBP3-204ENST00000371320 C8orf76Q96K31 380 aa33.85■■■■□ 3.01
SSBP3-204ENST00000371320 ORC3Q9UBD5 711 aaPredicted RBP33.85■■■■□ 3.01
SSBP3-204ENST00000371320 ITPK1Q13572 414 aa33.84■■■■□ 3.01
SSBP3-204ENST00000371320 CCDC152Q4G0S7 254 aa33.84■■■■□ 3.01
SSBP3-204ENST00000371320 STRBPQ96SI9 672 aaKnown RBP33.84■■■■□ 3.01
SSBP3-204ENST00000371320 RAB11FIP4Q86YS3 637 aa33.84■■■■□ 3.01
SSBP3-204ENST00000371320 MYH15Q9Y2K3 1946 aa33.84■■■■□ 3.01
SSBP3-204ENST00000371320 SNAP23O00161 211 aa33.83■■■■□ 3.01
SSBP3-204ENST00000371320 MAP3K12Q12852 859 aa33.83■■■■□ 3.01
SSBP3-204ENST00000371320 RASGRF1Q13972 1273 aa33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms