RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ANKRD24Q8TF21 1146 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 TTF2Q9UNY4 1162 aaKnown RBP14.35□□□□□ -0.11
GPC4-201ENST00000370828 AKAP2Q9Y2D5 859 aa14.35□□□□□ -0.11
GPC4-201ENST00000370828 RPS6KB1P23443 525 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 USP5P45974 858 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 CCT5P48643 541 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 MPRIPQ6WCQ1 1025 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 MRFAP1L1Q96HT8 127 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 MTMR6Q9Y217 621 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 SOS1Q07889 1333 aaPredicted RBP14.34□□□□□ -0.11
GPC4-201ENST00000370828 FRMD3A2A2Y4 597 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 ARID5AQ03989 594 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 MICAL1Q8TDZ2 1067 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 VPS16Q9H269 839 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.34□□□□□ -0.11
GPC4-201ENST00000370828 TTC41PQ6P2S7 1318 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 PEX19P40855 299 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 TUBB2AQ13885 445 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 CEP85LQ5SZL2 805 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 DHX32Q7L7V1 743 aaKnown RBP14.34□□□□□ -0.11
GPC4-201ENST00000370828 TUBB2BQ9BVA1 445 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 NCOA5Q9HCD5 579 aaKnown RBP14.34□□□□□ -0.11
GPC4-201ENST00000370828 RMND1Q9NWS8 449 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 PRC1O43663 620 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 UBLCP1Q8WVY7 318 aaPredicted RBP14.34□□□□□ -0.11
GPC4-201ENST00000370828 DNAJC5Q9H3Z4 198 aa14.34□□□□□ -0.11
GPC4-201ENST00000370828 CTDP1Q9Y5B0 961 aaPredicted RBP14.34□□□□□ -0.11
GPC4-201ENST00000370828 ZNF202O95125 648 aa14.33□□□□□ -0.11
GPC4-201ENST00000370828 TATP17735 454 aaPredicted RBP14.33□□□□□ -0.11
GPC4-201ENST00000370828 PCK1P35558 622 aa14.33□□□□□ -0.11
GPC4-201ENST00000370828 NLRP12P59046 1061 aa14.33□□□□□ -0.11
GPC4-201ENST00000370828 LACTBP83111 547 aaPredicted RBP14.33□□□□□ -0.11
GPC4-201ENST00000370828 ICE2Q659A1 982 aa14.33□□□□□ -0.11
GPC4-201ENST00000370828 PDLIM2Q96JY6 352 aa14.33□□□□□ -0.11
GPC4-201ENST00000370828 HGSO14964 777 aaPredicted RBP14.33□□□□□ -0.12
GPC4-201ENST00000370828 ARMCX6Q7L4S7 300 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 SLC52A1Q9NWF4 448 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 TRIM35Q9UPQ4 493 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 NFE2L3Q9Y4A8 694 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 A0A1W2PRG0 241 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 SLC27A2O14975 620 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 VIMP08670 466 aaKnown RBP14.33□□□□□ -0.12
GPC4-201ENST00000370828 GYS2P54840 703 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 ATL3Q6DD88 541 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 UBE3BQ7Z3V4 1068 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 BRAPQ7Z569 592 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 RNASE9P60153 205 aaKnown RBP14.33□□□□□ -0.12
GPC4-201ENST00000370828 ME3Q16798 604 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 PPP1R13BQ96KQ4 1090 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 PPP1R12CQ9BZL4 782 aa14.33□□□□□ -0.12
GPC4-201ENST00000370828 IFT140Q96RY7 1462 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 RXRAP19793 462 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 PPFIA1Q13136 1202 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 C6orf163Q5TEZ5 329 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 C8orf74Q6P047 294 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 G2E3Q7L622 706 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 PSMB7Q99436 277 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 SELENOOQ9BVL4 669 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 TCP11L1Q9NUJ3 509 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 PSMA7O14818 248 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 PNMA6AP0CW24 399 aaPredicted RBP14.32□□□□□ -0.12
GPC4-201ENST00000370828 PPP2R2CQ9Y2T4 447 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 PPP1R12BO60237 982 aaPredicted RBP14.32□□□□□ -0.12
GPC4-201ENST00000370828 ZSCAN20P17040 1043 aaPredicted RBP14.32□□□□□ -0.12
GPC4-201ENST00000370828 FAN1Q9Y2M0 1017 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 E7EVH7 732 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 ATP5J2-PTCD1G3V325 749 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 PTCD1O75127 700 aaKnown RBP14.32□□□□□ -0.12
GPC4-201ENST00000370828 STAT6P42226 847 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 LONRF2Q1L5Z9 754 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 SPAG5Q96R06 1193 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 SLF1Q9BQI6 1058 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 FAM204AQ9H8W3 233 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 EXOC1Q9NV70 894 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 CHPF2Q9P2E5 772 aa14.32□□□□□ -0.12
GPC4-201ENST00000370828 CCDC50Q8IVM0 306 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 INSRP06213 1382 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 RAD51AP2Q09MP3 1159 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 SH2D4BQ5SQS7 431 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 TTC19Q6DKK2 380 aaPredicted RBP14.31□□□□□ -0.12
GPC4-201ENST00000370828 IQCA1Q86XH1 822 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 SPTLC3Q9NUV7 552 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 COL17A1Q9UMD9 1497 aaPredicted RBP14.31□□□□□ -0.12
GPC4-201ENST00000370828 ATP1A2P50993 1020 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 DAAM2Q86T65 1068 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 TRMT44Q8IYL2 757 aaKnown RBP14.31□□□□□ -0.12
GPC4-201ENST00000370828 ANO1Q5XXA6 986 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 CATIPQ7Z7H3 387 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 FAM227BQ96M60 508 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 CEP63Q96MT8 703 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 PYM1Q9BRP8 204 aaKnown RBP14.31□□□□□ -0.12
GPC4-201ENST00000370828 TACO1Q9BSH4 297 aaKnown RBP14.31□□□□□ -0.12
GPC4-201ENST00000370828 IRAK4Q9NWZ3 460 aa14.31□□□□□ -0.12
GPC4-201ENST00000370828 GRIN2BQ13224 1484 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 NOS1P29475 1434 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 A0A087WWV3 80 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 FAM69CQ0P6D2 419 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 ZBTB17Q13105 803 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 ESCO1Q5FWF5 840 aa14.3□□□□□ -0.12
GPC4-201ENST00000370828 KRI1Q8N9T8 703 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms