RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ZBED3Q96IU2 234 aaPredicted RBP18.66■□□□□ 0.58
LMO4-201ENST00000370542 A0A1B0GUL6 1792 aa18.65■□□□□ 0.58
LMO4-201ENST00000370542 TTLL5Q6EMB2 1281 aa18.65■□□□□ 0.58
LMO4-201ENST00000370542 MXD3Q9BW11 206 aa18.65■□□□□ 0.58
LMO4-201ENST00000370542 CD209Q9NNX6 404 aa18.65■□□□□ 0.58
LMO4-201ENST00000370542 UTYO14607 1347 aa18.65■□□□□ 0.58
LMO4-201ENST00000370542 WNT10BO00744 389 aa18.64■□□□□ 0.57
LMO4-201ENST00000370542 RRP1P56182 461 aaKnown RBP18.64■□□□□ 0.57
LMO4-201ENST00000370542 NBPF9Q3BBW0 867 aa18.64■□□□□ 0.57
LMO4-201ENST00000370542 LMBR1LQ6UX01 489 aa18.64■□□□□ 0.57
LMO4-201ENST00000370542 SLC10A3P09131 477 aa18.63■□□□□ 0.57
LMO4-201ENST00000370542 IL1R1P14778 569 aa18.63■□□□□ 0.57
LMO4-201ENST00000370542 OGFOD1Q8N543 542 aa18.63■□□□□ 0.57
LMO4-201ENST00000370542 KAZALD1Q96I82 304 aa18.63■□□□□ 0.57
LMO4-201ENST00000370542 CSRNP1Q96S65 589 aa18.63■□□□□ 0.57
LMO4-201ENST00000370542 PAPPA2Q9BXP8 1791 aa18.63■□□□□ 0.57
LMO4-201ENST00000370542 SNAP23O00161 211 aa18.62■□□□□ 0.57
LMO4-201ENST00000370542 SRCIN1Q9C0H9 1055 aa18.62■□□□□ 0.57
LMO4-201ENST00000370542 DLL1O00548 723 aa18.61■□□□□ 0.57
LMO4-201ENST00000370542 TAF5LO75529 589 aa18.61■□□□□ 0.57
LMO4-201ENST00000370542 ZNF157P51786 506 aaPredicted RBP18.61■□□□□ 0.57
LMO4-201ENST00000370542 FKBP1AP62942 108 aaKnown RBP18.61■□□□□ 0.57
LMO4-201ENST00000370542 GTF2IP78347 998 aa18.61■□□□□ 0.57
LMO4-201ENST00000370542 MRPL50Q8N5N7 158 aaKnown RBP18.61■□□□□ 0.57
LMO4-201ENST00000370542 MTMR14Q8NCE2 650 aa18.61■□□□□ 0.57
LMO4-201ENST00000370542 CCDC57Q2TAC2 916 aa18.6■□□□□ 0.57
LMO4-201ENST00000370542 RABL6Q3YEC7 729 aaPredicted RBP18.6■□□□□ 0.57
LMO4-201ENST00000370542 HELBQ8NG08 1087 aaPredicted RBP18.6■□□□□ 0.57
LMO4-201ENST00000370542 BACH2Q9BYV9 841 aa18.6■□□□□ 0.57
LMO4-201ENST00000370542 C9orf78Q9NZ63 289 aaPredicted RBP18.6■□□□□ 0.57
LMO4-201ENST00000370542 E9PSI1 815 aa18.59■□□□□ 0.57
LMO4-201ENST00000370542 PDE4AP27815 886 aa18.59■□□□□ 0.57
LMO4-201ENST00000370542 KCNJ4P48050 445 aa18.59■□□□□ 0.57
LMO4-201ENST00000370542 LDHAL6AQ6ZMR3 332 aa18.59■□□□□ 0.57
LMO4-201ENST00000370542 REM2Q8IYK8 340 aaPredicted RBP18.59■□□□□ 0.57
LMO4-201ENST00000370542 CERS5Q8N5B7 392 aa18.59■□□□□ 0.57
LMO4-201ENST00000370542 ZNF594Q96JF6 807 aaPredicted RBP18.59■□□□□ 0.57
LMO4-201ENST00000370542 HDAC9Q9UKV0 1011 aa18.59■□□□□ 0.57
LMO4-201ENST00000370542 SZT2Q5T011 3432 aa18.58■□□□□ 0.57
LMO4-201ENST00000370542 PTPRCP08575 1304 aa18.58■□□□□ 0.57
LMO4-201ENST00000370542 NBPF7P0C2Y1 421 aaPredicted RBP18.58■□□□□ 0.56
LMO4-201ENST00000370542 SLFN5Q08AF3 891 aa18.58■□□□□ 0.56
LMO4-201ENST00000370542 RASAL3Q86YV0 1011 aa18.58■□□□□ 0.56
LMO4-201ENST00000370542 KIAA0825Q8IV33 1275 aa18.58■□□□□ 0.56
LMO4-201ENST00000370542 SUCLG2Q96I99 432 aa18.58■□□□□ 0.56
LMO4-201ENST00000370542 UBE4AQ14139 1066 aa18.57■□□□□ 0.56
LMO4-201ENST00000370542 SLC4A10Q6U841 1118 aa18.57■□□□□ 0.56
LMO4-201ENST00000370542 ZNF804AQ7Z570 1209 aa18.57■□□□□ 0.56
LMO4-201ENST00000370542 TRMT2AQ8IZ69 625 aaKnown RBP18.57■□□□□ 0.56
LMO4-201ENST00000370542 CHMP3Q9Y3E7 222 aa18.57■□□□□ 0.56
LMO4-201ENST00000370542 RIPOR2Q9Y4F9 1068 aa18.57■□□□□ 0.56
LMO4-201ENST00000370542 FAM205AQ6ZU69 1335 aa18.56■□□□□ 0.56
LMO4-201ENST00000370542 SASH1O94885 1247 aa18.56■□□□□ 0.56
LMO4-201ENST00000370542 FBXO46Q6PJ61 603 aaPredicted RBP18.56■□□□□ 0.56
LMO4-201ENST00000370542 APOBEC3FQ8IUX4 373 aaKnown RBP18.56■□□□□ 0.56
LMO4-201ENST00000370542 FBXW7Q969H0 707 aa18.56■□□□□ 0.56
LMO4-201ENST00000370542 RCAN3Q9UKA8 241 aa18.56■□□□□ 0.56
LMO4-201ENST00000370542 SCAF8Q9UPN6 1271 aaKnown RBP18.56■□□□□ 0.56
LMO4-201ENST00000370542 COL1A1P02452 1464 aaPredicted RBP18.55■□□□□ 0.56
LMO4-201ENST00000370542 PRAMEF18Q5VWM3 479 aa18.55■□□□□ 0.56
LMO4-201ENST00000370542 TDRD7Q8NHU6 1098 aaKnown RBP18.55■□□□□ 0.56
LMO4-201ENST00000370542 ZNF296Q8WUU4 475 aaPredicted RBP18.55■□□□□ 0.56
LMO4-201ENST00000370542 SSH1Q8WYL5 1049 aa18.55■□□□□ 0.56
LMO4-201ENST00000370542 CNNM1Q9NRU3 951 aa18.55■□□□□ 0.56
LMO4-201ENST00000370542 A0A0C4DFX4 3053 aa18.55■□□□□ 0.56
LMO4-201ENST00000370542 AKAP11Q9UKA4 1901 aa18.55■□□□□ 0.56
LMO4-201ENST00000370542 ALDH1L2Q3SY69 923 aa18.54■□□□□ 0.56
LMO4-201ENST00000370542 TAF7LQ5H9L4 462 aa18.54■□□□□ 0.56
LMO4-201ENST00000370542 MOB2Q70IA6 237 aa18.54■□□□□ 0.56
LMO4-201ENST00000370542 ANKRD44Q8N8A2 993 aa18.54■□□□□ 0.56
LMO4-201ENST00000370542 PUS3Q9BZE2 481 aaKnown RBP18.54■□□□□ 0.56
LMO4-201ENST00000370542 UBE2Q2LH0YL09 131 aa18.53■□□□□ 0.56
LMO4-201ENST00000370542 LDLRAD1Q5T700 205 aa18.53■□□□□ 0.56
LMO4-201ENST00000370542 FAM84BQ96KN1 310 aaPredicted RBP18.53■□□□□ 0.56
LMO4-201ENST00000370542 USP44Q9H0E7 712 aa18.53■□□□□ 0.56
LMO4-201ENST00000370542 BICC1Q9H694 974 aaKnown RBP18.53■□□□□ 0.56
LMO4-201ENST00000370542 ECM29Q5VYK3 1845 aa18.53■□□□□ 0.56
LMO4-201ENST00000370542 MROH5Q6ZUA9 1318 aa18.52■□□□□ 0.56
LMO4-201ENST00000370542 SPDYE2BA6NHP3 402 aa18.52■□□□□ 0.56
LMO4-201ENST00000370542 SPDYE6P0CI01 402 aa18.52■□□□□ 0.56
LMO4-201ENST00000370542 DLGAP5Q15398 846 aa18.52■□□□□ 0.56
LMO4-201ENST00000370542 MAP3K11Q16584 847 aa18.52■□□□□ 0.56
LMO4-201ENST00000370542 NOM1Q5C9Z4 860 aaKnown RBP18.52■□□□□ 0.56
LMO4-201ENST00000370542 VGLL2Q8N8G2 317 aa18.52■□□□□ 0.56
LMO4-201ENST00000370542 NF2P35240 595 aa18.51■□□□□ 0.55
LMO4-201ENST00000370542 TM4SF4P48230 202 aa18.51■□□□□ 0.55
LMO4-201ENST00000370542 FBXO33Q7Z6M2 555 aa18.51■□□□□ 0.55
LMO4-201ENST00000370542 DEFB129Q9H1M3 183 aa18.51■□□□□ 0.55
LMO4-201ENST00000370542 COLQQ9Y215 455 aaPredicted RBP18.51■□□□□ 0.55
LMO4-201ENST00000370542 PPP2R3BQ9Y5P8 575 aa18.51■□□□□ 0.55
LMO4-201ENST00000370542 HTTP42858 3142 aa18.5■□□□□ 0.55
LMO4-201ENST00000370542 UNCXA6NJT0 531 aa18.5■□□□□ 0.55
LMO4-201ENST00000370542 PLIN1O60240 522 aa18.5■□□□□ 0.55
LMO4-201ENST00000370542 CT47B1P0C2W7 299 aaPredicted RBP18.5■□□□□ 0.55
LMO4-201ENST00000370542 HIBADHP31937 336 aaKnown RBP18.5■□□□□ 0.55
LMO4-201ENST00000370542 CFAP100Q494V2 611 aa18.5■□□□□ 0.55
LMO4-201ENST00000370542 CDCA7LQ96GN5 454 aa18.5■□□□□ 0.55
LMO4-201ENST00000370542 PRMT6Q96LA8 375 aaPredicted RBP18.5■□□□□ 0.55
LMO4-201ENST00000370542 PCDHAC2Q9Y5I4 1007 aa18.5■□□□□ 0.55
LMO4-201ENST00000370542 PTPN12Q05209 780 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 175.2 ms