RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TIMM10P62072 90 aa18.27■□□□□ 0.51
COL9A1-204ENST00000370496 XAGE2Q96GT9 111 aa18.27■□□□□ 0.51
COL9A1-204ENST00000370496 GPR108Q9NPR9 543 aa18.27■□□□□ 0.51
COL9A1-204ENST00000370496 ADARB2Q9NS39 739 aaKnown RBP18.27■□□□□ 0.51
COL9A1-204ENST00000370496 CNOT7Q9UIV1 285 aaKnown RBP18.27■□□□□ 0.51
COL9A1-204ENST00000370496 COL1A1P02452 1464 aaPredicted RBP18.27■□□□□ 0.51
COL9A1-204ENST00000370496 PHKA1P46020 1223 aa18.26■□□□□ 0.51
COL9A1-204ENST00000370496 PNMA8AQ86V59 439 aaPredicted RBP18.26■□□□□ 0.51
COL9A1-204ENST00000370496 KIF1BPQ96EK5 621 aa18.26■□□□□ 0.51
COL9A1-204ENST00000370496 PCDHB15Q9Y5E8 787 aa18.26■□□□□ 0.51
COL9A1-204ENST00000370496 SHTN1A0MZ66 631 aa18.25■□□□□ 0.51
COL9A1-204ENST00000370496 RAB11FIP3O75154 756 aa18.25■□□□□ 0.51
COL9A1-204ENST00000370496 TOMM70O94826 608 aa18.25■□□□□ 0.51
COL9A1-204ENST00000370496 MFSD14BQ5SR56 506 aa18.25■□□□□ 0.51
COL9A1-204ENST00000370496 CCDC102BQ68D86 513 aa18.25■□□□□ 0.51
COL9A1-204ENST00000370496 RHPN1Q8TCX5 695 aa18.25■□□□□ 0.51
COL9A1-204ENST00000370496 BCL11AQ9H165 835 aa18.25■□□□□ 0.51
COL9A1-204ENST00000370496 FAM205AQ6ZU69 1335 aa18.25■□□□□ 0.51
COL9A1-204ENST00000370496 CENPBP07199 599 aaPredicted RBP18.24■□□□□ 0.51
COL9A1-204ENST00000370496 USP17L8P0C7I0 530 aa18.24■□□□□ 0.51
COL9A1-204ENST00000370496 USP50Q70EL3 339 aaPredicted RBP18.24■□□□□ 0.51
COL9A1-204ENST00000370496 KIAA0825Q8IV33 1275 aa18.24■□□□□ 0.51
COL9A1-204ENST00000370496 OGFOD1Q8N543 542 aa18.24■□□□□ 0.51
COL9A1-204ENST00000370496 IL1RAPL2Q9NP60 686 aa18.24■□□□□ 0.51
COL9A1-204ENST00000370496 CLEC11AQ9Y240 323 aa18.24■□□□□ 0.51
COL9A1-204ENST00000370496 FKBP1AP62942 108 aaKnown RBP18.23■□□□□ 0.51
COL9A1-204ENST00000370496 AACSQ86V21 672 aa18.23■□□□□ 0.51
COL9A1-204ENST00000370496 LDHDQ86WU2 507 aa18.23■□□□□ 0.51
COL9A1-204ENST00000370496 CLASRPQ8N2M8 674 aaKnown RBP18.23■□□□□ 0.51
COL9A1-204ENST00000370496 CERS5Q8N5B7 392 aa18.23■□□□□ 0.51
COL9A1-204ENST00000370496 RBM46Q8TBY0 533 aaKnown RBP18.23■□□□□ 0.51
COL9A1-204ENST00000370496 TRPM4Q8TD43 1214 aa18.23■□□□□ 0.51
COL9A1-204ENST00000370496 TBC1D22AQ8WUA7 517 aa18.23■□□□□ 0.51
COL9A1-204ENST00000370496 GMLQ99445 158 aa18.23■□□□□ 0.51
COL9A1-204ENST00000370496 F8W031 263 aaPredicted RBP18.22■□□□□ 0.51
COL9A1-204ENST00000370496 SEMA3EO15041 775 aa18.22■□□□□ 0.51
COL9A1-204ENST00000370496 POTEIP0CG38 1075 aa18.22■□□□□ 0.51
COL9A1-204ENST00000370496 POTEJP0CG39 1038 aa18.22■□□□□ 0.51
COL9A1-204ENST00000370496 KIF4BQ2VIQ3 1234 aa18.22■□□□□ 0.51
COL9A1-204ENST00000370496 TBC1D10BQ4KMP7 808 aaPredicted RBP18.22■□□□□ 0.51
COL9A1-204ENST00000370496 TTC39AQ5SRH9 613 aa18.22■□□□□ 0.51
COL9A1-204ENST00000370496 SAMD7Q7Z3H4 446 aa18.22■□□□□ 0.51
COL9A1-204ENST00000370496 SMC1BQ8NDV3 1235 aa18.22■□□□□ 0.51
COL9A1-204ENST00000370496 DBNDD2Q9BQY9 259 aa18.22■□□□□ 0.51
COL9A1-204ENST00000370496 LRRCC1Q9C099 1032 aa18.22■□□□□ 0.51
COL9A1-204ENST00000370496 HDAC9Q9UKV0 1011 aa18.22■□□□□ 0.51
COL9A1-204ENST00000370496 DENND2AQ9ULE3 1009 aa18.22■□□□□ 0.51
COL9A1-204ENST00000370496 CCDC158Q5M9N0 1113 aa18.21■□□□□ 0.51
COL9A1-204ENST00000370496 RBM26Q5T8P6 1007 aaKnown RBP18.21■□□□□ 0.51
COL9A1-204ENST00000370496 CCDC8Q9H0W5 538 aaPredicted RBP18.21■□□□□ 0.51
COL9A1-204ENST00000370496 TLR7Q9NYK1 1049 aaKnown RBP18.21■□□□□ 0.51
COL9A1-204ENST00000370496 DBNLQ9UJU6 430 aaKnown RBP18.21■□□□□ 0.51
COL9A1-204ENST00000370496 ECM29Q5VYK3 1845 aa18.21■□□□□ 0.51
COL9A1-204ENST00000370496 UQCRFS1P1P0C7P4 283 aa18.2■□□□□ 0.5
COL9A1-204ENST00000370496 ZNF280AP59817 542 aaPredicted RBP18.2■□□□□ 0.5
COL9A1-204ENST00000370496 RASGRF1Q13972 1273 aa18.2■□□□□ 0.5
COL9A1-204ENST00000370496 WDR66Q8TBY9 1149 aa18.2■□□□□ 0.5
COL9A1-204ENST00000370496 EAF2Q96CJ1 260 aaPredicted RBP18.2■□□□□ 0.5
COL9A1-204ENST00000370496 MYOZ2Q9NPC6 264 aa18.2■□□□□ 0.5
COL9A1-204ENST00000370496 MAST2Q6P0Q8 1798 aa18.2■□□□□ 0.5
COL9A1-204ENST00000370496 PDS5AQ29RF7 1337 aaKnown RBP18.19■□□□□ 0.5
COL9A1-204ENST00000370496 IFIT2P09913 472 aaKnown RBP18.19■□□□□ 0.5
COL9A1-204ENST00000370496 ARID4AP29374 1257 aaPredicted RBP18.19■□□□□ 0.5
COL9A1-204ENST00000370496 CHADLQ6NUI6 762 aa18.19■□□□□ 0.5
COL9A1-204ENST00000370496 DCTPP1Q9H773 170 aa18.19■□□□□ 0.5
COL9A1-204ENST00000370496 MAST3O60307 1309 aa18.18■□□□□ 0.5
COL9A1-204ENST00000370496 EGFRP00533 1210 aa18.18■□□□□ 0.5
COL9A1-204ENST00000370496 MMP14P50281 582 aa18.18■□□□□ 0.5
COL9A1-204ENST00000370496 HDAC1Q13547 482 aaPredicted RBP18.18■□□□□ 0.5
COL9A1-204ENST00000370496 TTF2Q9UNY4 1162 aaKnown RBP18.18■□□□□ 0.5
COL9A1-204ENST00000370496 FSTL1Q12841 308 aa18.17■□□□□ 0.5
COL9A1-204ENST00000370496 ZGPATQ8N5A5 531 aaKnown RBP18.17■□□□□ 0.5
COL9A1-204ENST00000370496 SPATA5Q8NB90 893 aa18.17■□□□□ 0.5
COL9A1-204ENST00000370496 AKAP11Q9UKA4 1901 aa18.17■□□□□ 0.5
COL9A1-204ENST00000370496 SMARCA5O60264 1052 aaPredicted RBP18.17■□□□□ 0.5
COL9A1-204ENST00000370496 RBM5P52756 815 aaKnown RBP eCLIP18.17■□□□□ 0.5
COL9A1-204ENST00000370496 HIRAP54198 1017 aaPredicted RBP18.17■□□□□ 0.5
COL9A1-204ENST00000370496 C1QTNF8P60827 252 aa18.17■□□□□ 0.5
COL9A1-204ENST00000370496 MAP1SQ66K74 1059 aaPredicted RBP18.17■□□□□ 0.5
COL9A1-204ENST00000370496 ZBTB47Q9UFB7 747 aaPredicted RBP18.17■□□□□ 0.5
COL9A1-204ENST00000370496 SALL1Q9NSC2 1324 aa18.16■□□□□ 0.5
COL9A1-204ENST00000370496 ZBTB22O15209 634 aa18.16■□□□□ 0.5
COL9A1-204ENST00000370496 MCAMP43121 646 aa18.16■□□□□ 0.5
COL9A1-204ENST00000370496 DLGAP5Q15398 846 aa18.16■□□□□ 0.5
COL9A1-204ENST00000370496 PI16Q6UXB8 463 aa18.16■□□□□ 0.5
COL9A1-204ENST00000370496 ZC3H15Q8WU90 426 aaKnown RBP18.16■□□□□ 0.5
COL9A1-204ENST00000370496 RWDD1Q9H446 243 aaPredicted RBP18.16■□□□□ 0.5
COL9A1-204ENST00000370496 GGA3Q9NZ52 723 aa18.16■□□□□ 0.5
COL9A1-204ENST00000370496 HMG20BQ9P0W2 317 aa18.16■□□□□ 0.5
COL9A1-204ENST00000370496 ABCF2Q9UG63 623 aa18.16■□□□□ 0.5
COL9A1-204ENST00000370496 SUGT1Q9Y2Z0 365 aa18.16■□□□□ 0.5
COL9A1-204ENST00000370496 LDHBP07195 334 aaKnown RBP18.15■□□□□ 0.5
COL9A1-204ENST00000370496 SCARF1Q14162 830 aa18.15■□□□□ 0.5
COL9A1-204ENST00000370496 GRIK5Q16478 980 aa18.15■□□□□ 0.5
COL9A1-204ENST00000370496 GCC1Q96CN9 775 aa18.15■□□□□ 0.5
COL9A1-204ENST00000370496 PRDX5P30044 214 aa18.14■□□□□ 0.49
COL9A1-204ENST00000370496 CFAP100Q494V2 611 aa18.14■□□□□ 0.49
COL9A1-204ENST00000370496 DZIP1Q86YF9 867 aaKnown RBP18.14■□□□□ 0.49
COL9A1-204ENST00000370496 TEKT1Q969V4 418 aa18.14■□□□□ 0.49
COL9A1-204ENST00000370496 DCPSQ96C86 337 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms