RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 RPS8P62241 208 aaKnown RBP8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 SSRP1Q08945 709 aaKnown RBP8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 CDC37L1Q7L3B6 337 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 SOS2Q07890 1332 aaPredicted RBP8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 ST5P78524 1137 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 KAZALD1Q96I82 304 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 MCM9Q9NXL9 1143 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 HOOK1Q9UJC3 728 aaKnown RBP8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 R3HCC1Q9Y3T6 440 aaKnown RBP8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 PXDNQ92626 1479 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 CYP19A1P11511 503 aaPredicted RBP8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 OSBP2Q969R2 916 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 ZSWIM6Q9HCJ5 1215 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 LMBRD1Q9NUN5 540 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 IFT172Q9UG01 1749 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 CCDC196A0A1B0GTZ2 297 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 CHRNDQ07001 517 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 FAM196AQ6ZSG2 479 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 CATIPQ7Z7H3 387 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 SDR42E1Q8WUS8 393 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 NAT10Q9H0A0 1025 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 BRD1O95696 1058 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 HIBADHP31937 336 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 PICALMQ13492 652 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 HOMER1Q86YM7 354 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 CCAR1Q8IX12 1150 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 PHKBQ93100 1093 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 CRNKL1Q9BZJ0 848 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 AATFQ9NY61 560 aaKnown RBP eCLIP8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 CCDC39Q9UFE4 941 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 USP32Q8NFA0 1604 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 ITSN1Q15811 1721 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 MST1RQ04912 1400 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 PDIA4P13667 645 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 PDE6AP16499 860 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 OLFM4Q6UX06 510 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 ESR2Q92731 530 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 PUS7LQ9H0K6 701 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 MEGF6O75095 1541 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 hCG_1642624A0A1W2PR95 340 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 TRIM37O94972 964 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 ERFEQ4G0M1 354 aa8.29□□□□□ -1.08
TGFBR3-202ENST00000370399 BAG3O95817 575 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 RTN1Q16799 776 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 IFIT1BQ5T764 474 aaKnown RBP8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 LRSAM1Q6UWE0 723 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 VSIG10Q8N0Z9 540 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 TM6SF1Q9BZW5 370 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 QTRT2Q9H974 415 aaKnown RBP8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 FOXO4P98177 505 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 CMTR1Q8N1G2 835 aaKnown RBP8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 ZC3H12CQ9C0D7 883 aaKnown RBP8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 GPHNQ9NQX3 736 aaPredicted RBP8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 TMEM63CQ9P1W3 806 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 PALLDQ8WX93 1383 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 UBR1Q8IWV7 1749 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 MAST3O60307 1309 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 MROH5Q6ZUA9 1318 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 UFL1O94874 794 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 PDE4BQ07343 736 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 SCARF1Q14162 830 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 NECTIN1Q15223 517 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 CRACR2BQ8N4Y2 399 aaPredicted RBP8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 WASF1Q92558 559 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 KRT23Q9C075 422 aa8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 ZSCAN16Q9H4T2 348 aaPredicted RBP8.28□□□□□ -1.08
TGFBR3-202ENST00000370399 ADD1P35611 737 aaKnown RBP8.27□□□□□ -1.08
TGFBR3-202ENST00000370399 NLRP5P59047 1200 aa8.27□□□□□ -1.08
TGFBR3-202ENST00000370399 DHX8Q14562 1220 aaKnown RBP8.27□□□□□ -1.08
TGFBR3-202ENST00000370399 MSL1Q68DK7 614 aa8.27□□□□□ -1.08
TGFBR3-202ENST00000370399 MARCH10Q8NA82 808 aaPredicted RBP8.27□□□□□ -1.08
TGFBR3-202ENST00000370399 M0R2C6 588 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 ZNF165P49910 485 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 SOGA3Q5TF21 947 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 GAS2L3Q86XJ1 694 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 ZNF830Q96NB3 372 aaPredicted RBP8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 FAM13BQ9NYF5 915 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 KIF20BQ96Q89 1820 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 SERPINC1P01008 464 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 LDHBP07195 334 aaKnown RBP8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 LDHCP07864 332 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 ZMYM1Q5SVZ6 1142 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 KLHL10Q6JEL2 608 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 PCMTD1Q96MG8 357 aaPredicted RBP8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 ISCA1Q9BUE6 129 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 DSCC1Q9BVC3 393 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 SAP30BPQ9UHR5 308 aaKnown RBP8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 ANGEL1Q9UNK9 670 aaKnown RBP8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 ADGRB2O60241 1585 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 HSP90AA4PQ58FG1 418 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 SPTY2D1Q68D10 685 aaPredicted RBP8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 CEP57L1Q8IYX8 460 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 RBSNQ9H1K0 784 aa8.27□□□□□ -1.09
TGFBR3-202ENST00000370399 SHPRHQ149N8 1683 aa8.26□□□□□ -1.09
TGFBR3-202ENST00000370399 PRKAB2O43741 272 aa8.26□□□□□ -1.09
TGFBR3-202ENST00000370399 MCAMP43121 646 aa8.26□□□□□ -1.09
TGFBR3-202ENST00000370399 CNNM2Q9H8M5 875 aa8.26□□□□□ -1.09
TGFBR3-202ENST00000370399 NOL7Q9UMY1 257 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms