RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SLC26A6Q9BXS9 759 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 LSG1Q9H089 658 aaKnown RBP6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 KAT14Q9H8E8 782 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 ADCY9O60503 1353 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 CPDO75976 1380 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 PTPDC1A2A3K4 754 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 SERPINC1P01008 464 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 DNM1Q05193 864 aaKnown RBP6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 APOBRQ0VD83 1088 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 CCDC129Q6ZRS4 1044 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 PCMTD1Q96MG8 357 aaPredicted RBP6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 IQSEC3Q9UPP2 1182 aaPredicted RBP6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 A0A0D9SFI3 127 aa6.15□□□□□ -1.42
SMNDC1-202ENST00000369603 MBD4O95243 580 aa6.15□□□□□ -1.42
SMNDC1-202ENST00000369603 CPA1P15085 419 aa6.15□□□□□ -1.42
SMNDC1-202ENST00000369603 ZAP70P43403 619 aa6.15□□□□□ -1.42
SMNDC1-202ENST00000369603 IFIT1BQ5T764 474 aaKnown RBP6.15□□□□□ -1.42
SMNDC1-202ENST00000369603 UNC5CLQ8IV45 518 aa6.15□□□□□ -1.42
SMNDC1-202ENST00000369603 CRACR2BQ8N4Y2 399 aaPredicted RBP6.15□□□□□ -1.42
SMNDC1-202ENST00000369603 SPATA5Q8NB90 893 aa6.15□□□□□ -1.42
SMNDC1-202ENST00000369603 PI4K2BQ8TCG2 481 aa6.15□□□□□ -1.42
SMNDC1-202ENST00000369603 ZBTB1Q9Y2K1 713 aa6.15□□□□□ -1.42
SMNDC1-202ENST00000369603 C3P01024 1663 aa6.15□□□□□ -1.42
SMNDC1-202ENST00000369603 SASH1O94885 1247 aa6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 CLSTN1O94985 981 aa6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 BRD1O95696 1058 aa6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 CRKLP46109 303 aaKnown RBP6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 CCAR1Q8IX12 1150 aaKnown RBP6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 PALD1Q9ULE6 856 aa6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 PDE8BO95263 885 aa6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 HIBADHP31937 336 aaKnown RBP6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 NLRP5P59047 1200 aa6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 PTH1RQ03431 593 aa6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 STX1AQ16623 288 aa6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 LRRC24Q50LG9 513 aa6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 KANK3Q6NY19 840 aa6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 NLRP10Q86W26 655 aa6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 CCDC82Q8N4S0 544 aa6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 RBM17Q96I25 401 aaKnown RBP6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 BCL11BQ9C0K0 894 aaPredicted RBP6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 MAGEC2Q9UBF1 373 aaPredicted RBP6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 ANGEL1Q9UNK9 670 aaKnown RBP6.15□□□□□ -1.43
SMNDC1-202ENST00000369603 SOS2Q07890 1332 aaPredicted RBP6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 SHPRHQ149N8 1683 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 CCDC194A0A1B0GVG4 234 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 HLA-DOAP06340 250 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 LDHBP07195 334 aaKnown RBP6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 PPP2R5BQ15173 497 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 SPC24Q8NBT2 197 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 ZNF592Q92610 1267 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 SMARCE1Q969G3 411 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 CCDC43Q96MW1 224 aaKnown RBP6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 TAF5LO75529 589 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 TRIM28Q13263 835 aaKnown RBP6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 WDR66Q8TBY9 1149 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 MRPS27Q92552 414 aaKnown RBP6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 PRDM10Q9NQV6 1147 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 PODXL2Q9NZ53 605 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 PLEKHG2Q9H7P9 1386 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 MST1RQ04912 1400 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 RPS8P62241 208 aaKnown RBP6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 UBE3CQ15386 1083 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 CCDC144CPQ8IYA2 1237 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 CKAP2LQ8IYA6 745 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 EDC3Q96F86 508 aaKnown RBP6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 ANTXR1Q9H6X2 564 aa6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 NSFL1CQ9UNZ2 370 aaKnown RBP6.14□□□□□ -1.43
SMNDC1-202ENST00000369603 ZNF165P49910 485 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 CUL4AQ13619 759 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 ZMYM1Q5SVZ6 1142 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 CCDC102BQ68D86 513 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 KLHL34Q8N239 644 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 PDILTQ8N807 584 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 MIGA1Q8NAN2 632 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 CNNM3Q8NE01 707 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 ZNF274Q96GC6 653 aaPredicted RBP6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 RAB34Q9BZG1 259 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 ZC3H12CQ9C0D7 883 aaKnown RBP6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 GREM2Q9H772 168 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 BMP2KQ9NSY1 1161 aaPredicted RBP6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 TFCP2L1Q9NZI6 479 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 RFX7Q2KHR2 1363 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 ZNF532Q9HCE3 1301 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 E7EWF7 191 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 TSPY3P0CV98 308 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 TSPY8P0CW00 308 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 CHST3Q7LGC8 479 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 CCDC148Q8NFR7 591 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 EYA3Q99504 573 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 RBM28Q9NW13 759 aaKnown RBP6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 TLR7Q9NYK1 1049 aaKnown RBP6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 NDUFB9Q9Y6M9 179 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 CDHR2Q9BYE9 1310 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 MPHOSPH10O00566 681 aaKnown RBP6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 HSPD1P10809 573 aaKnown RBP6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 UBE4AQ14139 1066 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 CLEC4GQ6UXB4 293 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 RAB11FIP4Q86YS3 637 aa6.13□□□□□ -1.43
SMNDC1-202ENST00000369603 FAM200AQ8TCP9 573 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms