RNA–Protein interactions for RNA: ENST00000368902.1

SCNM1-201, Transcript of sodium channel modifier 1, humanhuman

TSL 2 BASIC

Gene SCNM1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-201ENST00000368902 UBTFL1P0CB47 393 aaPredicted RBP10.99□□□□□ -0.65
SCNM1-201ENST00000368902 TRIM27P14373 513 aa10.99□□□□□ -0.65
SCNM1-201ENST00000368902 INTS3Q68E01 1043 aaKnown RBP10.99□□□□□ -0.65
SCNM1-201ENST00000368902 CTU1Q7Z7A3 348 aaKnown RBP10.99□□□□□ -0.65
SCNM1-201ENST00000368902 RASAL3Q86YV0 1011 aa10.99□□□□□ -0.65
SCNM1-201ENST00000368902 COA1Q9GZY4 146 aa10.99□□□□□ -0.65
SCNM1-201ENST00000368902 MYH3P11055 1940 aa10.98□□□□□ -0.65
SCNM1-201ENST00000368902 USP17L3A6NCW0 530 aa10.98□□□□□ -0.65
SCNM1-201ENST00000368902 USP17L4A6NCW7 530 aa10.98□□□□□ -0.65
SCNM1-201ENST00000368902 SNAP23O00161 211 aa10.98□□□□□ -0.65
SCNM1-201ENST00000368902 ZNF280AP59817 542 aaPredicted RBP10.98□□□□□ -0.65
SCNM1-201ENST00000368902 FKBP1BP68106 108 aa10.98□□□□□ -0.65
SCNM1-201ENST00000368902 ANGEL2Q5VTE6 544 aaKnown RBP10.98□□□□□ -0.65
SCNM1-201ENST00000368902 PRPF38BQ5VTL8 546 aaKnown RBP10.98□□□□□ -0.65
SCNM1-201ENST00000368902 ZKSCAN2Q63HK3 967 aa10.98□□□□□ -0.65
SCNM1-201ENST00000368902 USP17L1Q7RTZ2 530 aa10.98□□□□□ -0.65
SCNM1-201ENST00000368902 TXNRD3Q86VQ6 643 aa10.98□□□□□ -0.65
SCNM1-201ENST00000368902 PUS3Q9BZE2 481 aaKnown RBP10.98□□□□□ -0.65
SCNM1-201ENST00000368902 RIPOR2Q9Y4F9 1068 aa10.98□□□□□ -0.65
SCNM1-201ENST00000368902 KLRK1P26718 216 aa10.97□□□□□ -0.65
SCNM1-201ENST00000368902 MMP14P50281 582 aa10.97□□□□□ -0.65
SCNM1-201ENST00000368902 RSBN1LQ6PCB5 846 aaPredicted RBP10.97□□□□□ -0.65
SCNM1-201ENST00000368902 CLUAP1Q96AJ1 413 aa10.97□□□□□ -0.65
SCNM1-201ENST00000368902 CSRNP1Q96S65 589 aa10.97□□□□□ -0.65
SCNM1-201ENST00000368902 MEIS3Q99687 375 aa10.97□□□□□ -0.65
SCNM1-201ENST00000368902 TNNQ9UQP3 1299 aa10.97□□□□□ -0.65
SCNM1-201ENST00000368902 PITPNM2Q9BZ72 1349 aa10.97□□□□□ -0.65
SCNM1-201ENST00000368902 MED23Q9ULK4 1368 aa10.97□□□□□ -0.65
SCNM1-201ENST00000368902 MROH5Q6ZUA9 1318 aa10.96□□□□□ -0.65
SCNM1-201ENST00000368902 GNAI3P08754 354 aa10.96□□□□□ -0.65
SCNM1-201ENST00000368902 UBE4AQ14139 1066 aa10.96□□□□□ -0.65
SCNM1-201ENST00000368902 LRRC24Q50LG9 513 aa10.96□□□□□ -0.65
SCNM1-201ENST00000368902 METTL24Q5JXM2 366 aa10.96□□□□□ -0.65
SCNM1-201ENST00000368902 C15orf52Q6ZUT6 534 aaKnown RBP10.96□□□□□ -0.65
SCNM1-201ENST00000368902 KLHDC4Q8TBB5 520 aa10.96□□□□□ -0.65
SCNM1-201ENST00000368902 FBXW7Q969H0 707 aa10.96□□□□□ -0.65
SCNM1-201ENST00000368902 CD209Q9NNX6 404 aa10.96□□□□□ -0.65
SCNM1-201ENST00000368902 LRRFIP2Q9Y608 721 aaKnown RBP10.96□□□□□ -0.65
SCNM1-201ENST00000368902 USP17L8P0C7I0 530 aa10.95□□□□□ -0.66
SCNM1-201ENST00000368902 RFX5P48382 616 aaPredicted RBP10.95□□□□□ -0.66
SCNM1-201ENST00000368902 SCARF1Q14162 830 aa10.95□□□□□ -0.66
SCNM1-201ENST00000368902 STRIP1Q5VSL9 837 aa10.95□□□□□ -0.66
SCNM1-201ENST00000368902 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
SCNM1-201ENST00000368902 TMEM57Q8N5G2 664 aa10.95□□□□□ -0.66
SCNM1-201ENST00000368902 GMLQ99445 158 aa10.95□□□□□ -0.66
SCNM1-201ENST00000368902 MYOZ2Q9NPC6 264 aa10.95□□□□□ -0.66
SCNM1-201ENST00000368902 HPS5Q9UPZ3 1129 aa10.95□□□□□ -0.66
SCNM1-201ENST00000368902 CACNA1FO60840 1977 aa10.95□□□□□ -0.66
SCNM1-201ENST00000368902 HTTP42858 3142 aa10.95□□□□□ -0.66
SCNM1-201ENST00000368902 EYA2O00167 538 aa10.94□□□□□ -0.66
SCNM1-201ENST00000368902 GTF2IP78347 998 aa10.94□□□□□ -0.66
SCNM1-201ENST00000368902 PTPN12Q05209 780 aaKnown RBP10.94□□□□□ -0.66
SCNM1-201ENST00000368902 DACT2Q5SW24 774 aa10.94□□□□□ -0.66
SCNM1-201ENST00000368902 ZNF804AQ7Z570 1209 aa10.94□□□□□ -0.66
SCNM1-201ENST00000368902 FTSJ3Q8IY81 847 aaKnown RBP10.94□□□□□ -0.66
SCNM1-201ENST00000368902 DZIP1LQ8IYY4 767 aaKnown RBP10.94□□□□□ -0.66
SCNM1-201ENST00000368902 MXD3Q9BW11 206 aa10.94□□□□□ -0.66
SCNM1-201ENST00000368902 HDAC9Q9UKV0 1011 aa10.94□□□□□ -0.66
SCNM1-201ENST00000368902 MYO3BQ8WXR4 1341 aa10.93□□□□□ -0.66
SCNM1-201ENST00000368902 IRS2Q9Y4H2 1338 aa10.93□□□□□ -0.66
SCNM1-201ENST00000368902 PDE8BO95263 885 aa10.93□□□□□ -0.66
SCNM1-201ENST00000368902 GNAI2P04899 355 aa10.93□□□□□ -0.66
SCNM1-201ENST00000368902 HIBADHP31937 336 aaKnown RBP10.93□□□□□ -0.66
SCNM1-201ENST00000368902 MOB2Q70IA6 237 aa10.93□□□□□ -0.66
SCNM1-201ENST00000368902 OGFOD1Q8N543 542 aa10.93□□□□□ -0.66
SCNM1-201ENST00000368902 ZNF296Q8WUU4 475 aaPredicted RBP10.93□□□□□ -0.66
SCNM1-201ENST00000368902 FBXO3Q9UK99 471 aa10.93□□□□□ -0.66
SCNM1-201ENST00000368902 ZNF646O15015 1829 aaPredicted RBP10.93□□□□□ -0.66
SCNM1-201ENST00000368902 SPEF2Q9C093 1822 aa10.93□□□□□ -0.66
SCNM1-201ENST00000368902 IL1R1P14778 569 aa10.92□□□□□ -0.66
SCNM1-201ENST00000368902 NF2P35240 595 aa10.92□□□□□ -0.66
SCNM1-201ENST00000368902 GYG1P46976 350 aa10.92□□□□□ -0.66
SCNM1-201ENST00000368902 TTLL12Q14166 644 aaPredicted RBP10.92□□□□□ -0.66
SCNM1-201ENST00000368902 PKN2Q16513 984 aaKnown RBP10.92□□□□□ -0.66
SCNM1-201ENST00000368902 NOM1Q5C9Z4 860 aaKnown RBP10.92□□□□□ -0.66
SCNM1-201ENST00000368902 FBXO33Q7Z6M2 555 aa10.92□□□□□ -0.66
SCNM1-201ENST00000368902 VPS37DQ86XT2 251 aa10.92□□□□□ -0.66
SCNM1-201ENST00000368902 FAM84BQ96KN1 310 aaPredicted RBP10.92□□□□□ -0.66
SCNM1-201ENST00000368902 CEP126Q9P2H0 1117 aa10.92□□□□□ -0.66
SCNM1-201ENST00000368902 SCAF8Q9UPN6 1271 aaKnown RBP10.92□□□□□ -0.66
SCNM1-201ENST00000368902 SRGAP3O43295 1099 aa10.91□□□□□ -0.66
SCNM1-201ENST00000368902 CIAO1O76071 339 aa10.91□□□□□ -0.66
SCNM1-201ENST00000368902 SASH1O94885 1247 aa10.91□□□□□ -0.66
SCNM1-201ENST00000368902 TBC1D8O95759 1140 aa10.91□□□□□ -0.66
SCNM1-201ENST00000368902 IFIT1P09914 478 aaKnown RBP10.91□□□□□ -0.66
SCNM1-201ENST00000368902 MS4A1P11836 297 aa10.91□□□□□ -0.66
SCNM1-201ENST00000368902 MKRN3Q13064 507 aaKnown RBP10.91□□□□□ -0.66
SCNM1-201ENST00000368902 CAVIN4Q5BKX8 364 aa10.91□□□□□ -0.66
SCNM1-201ENST00000368902 ATG9AQ7Z3C6 839 aa10.91□□□□□ -0.66
SCNM1-201ENST00000368902 ITPRIPQ8IWB1 547 aa10.91□□□□□ -0.66
SCNM1-201ENST00000368902 VGLL2Q8N8G2 317 aa10.91□□□□□ -0.66
SCNM1-201ENST00000368902 TDRD7Q8NHU6 1098 aaKnown RBP10.91□□□□□ -0.66
SCNM1-201ENST00000368902 SIL1Q9H173 461 aa10.91□□□□□ -0.66
SCNM1-201ENST00000368902 COPRSQ9NQ92 184 aa10.91□□□□□ -0.66
SCNM1-201ENST00000368902 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
SCNM1-201ENST00000368902 PA2G4Q9UQ80 394 aaKnown RBP10.91□□□□□ -0.66
SCNM1-201ENST00000368902 MKI67P46013 3256 aaKnown RBP10.9□□□□□ -0.66
SCNM1-201ENST00000368902 UBE2Q2LH0YL09 131 aa10.9□□□□□ -0.66
SCNM1-201ENST00000368902 ZBTB7BO15156 539 aaPredicted RBP10.9□□□□□ -0.66
SCNM1-201ENST00000368902 RLBP1P12271 317 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms