RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 USP17L3A6NCW0 530 aa18.32■□□□□ 0.52
SF3B5-201ENST00000367569 USP17L4A6NCW7 530 aa18.32■□□□□ 0.52
SF3B5-201ENST00000367569 USP17L8P0C7I0 530 aa18.32■□□□□ 0.52
SF3B5-201ENST00000367569 METTL24Q5JXM2 366 aa18.32■□□□□ 0.52
SF3B5-201ENST00000367569 ANGEL2Q5VTE6 544 aaKnown RBP18.32■□□□□ 0.52
SF3B5-201ENST00000367569 USP17L1Q7RTZ2 530 aa18.32■□□□□ 0.52
SF3B5-201ENST00000367569 SULF1Q8IWU6 871 aa18.32■□□□□ 0.52
SF3B5-201ENST00000367569 C2orf69Q8N8R5 385 aa18.32■□□□□ 0.52
SF3B5-201ENST00000367569 NOGQ13253 232 aa18.31■□□□□ 0.52
SF3B5-201ENST00000367569 MYOZ2Q9NPC6 264 aa18.31■□□□□ 0.52
SF3B5-201ENST00000367569 FAM155AB1AL88 458 aaPredicted RBP18.3■□□□□ 0.52
SF3B5-201ENST00000367569 GNAI3P08754 354 aa18.3■□□□□ 0.52
SF3B5-201ENST00000367569 PTPN12Q05209 780 aaKnown RBP18.3■□□□□ 0.52
SF3B5-201ENST00000367569 RGMBQ6NW40 437 aa18.3■□□□□ 0.52
SF3B5-201ENST00000367569 CDCA5Q96FF9 252 aa18.3■□□□□ 0.52
SF3B5-201ENST00000367569 ABHD8Q96I13 439 aa18.3■□□□□ 0.52
SF3B5-201ENST00000367569 RIPOR2Q9Y4F9 1068 aa18.3■□□□□ 0.52
SF3B5-201ENST00000367569 CASP8AP2Q9UKL3 1982 aa18.3■□□□□ 0.52
SF3B5-201ENST00000367569 CA12O43570 354 aa18.29■□□□□ 0.52
SF3B5-201ENST00000367569 DACT2Q5SW24 774 aa18.29■□□□□ 0.52
SF3B5-201ENST00000367569 SRGAP3O43295 1099 aa18.28■□□□□ 0.52
SF3B5-201ENST00000367569 GYG1P46976 350 aa18.28■□□□□ 0.52
SF3B5-201ENST00000367569 COA1Q9GZY4 146 aa18.28■□□□□ 0.52
SF3B5-201ENST00000367569 SCAF8Q9UPN6 1271 aaKnown RBP18.28■□□□□ 0.52
SF3B5-201ENST00000367569 IQSEC3Q9UPP2 1182 aaPredicted RBP18.28■□□□□ 0.52
SF3B5-201ENST00000367569 MROH5Q6ZUA9 1318 aa18.27■□□□□ 0.52
SF3B5-201ENST00000367569 PNMA6EA0A0J9YXQ4 647 aa18.27■□□□□ 0.52
SF3B5-201ENST00000367569 EYA2O00167 538 aa18.27■□□□□ 0.52
SF3B5-201ENST00000367569 GNAI2P04899 355 aa18.27■□□□□ 0.52
SF3B5-201ENST00000367569 ZNF157P51786 506 aaPredicted RBP18.27■□□□□ 0.52
SF3B5-201ENST00000367569 NBPF9Q3BBW0 867 aa18.27■□□□□ 0.52
SF3B5-201ENST00000367569 C20orf194Q5TEA3 1177 aa18.27■□□□□ 0.52
SF3B5-201ENST00000367569 VGLL2Q8N8G2 317 aa18.27■□□□□ 0.52
SF3B5-201ENST00000367569 GTF2IP78347 998 aa18.26■□□□□ 0.51
SF3B5-201ENST00000367569 KIF23Q02241 960 aaPredicted RBP18.26■□□□□ 0.51
SF3B5-201ENST00000367569 STRIP1Q5VSL9 837 aa18.26■□□□□ 0.51
SF3B5-201ENST00000367569 ATG9AQ7Z3C6 839 aa18.26■□□□□ 0.51
SF3B5-201ENST00000367569 ZNF804AQ7Z570 1209 aa18.26■□□□□ 0.51
SF3B5-201ENST00000367569 CCDC102AQ96A19 550 aa18.26■□□□□ 0.51
SF3B5-201ENST00000367569 CD209Q9NNX6 404 aa18.26■□□□□ 0.51
SF3B5-201ENST00000367569 COG6Q9Y2V7 657 aa18.26■□□□□ 0.51
SF3B5-201ENST00000367569 PITPNM2Q9BZ72 1349 aa18.24■□□□□ 0.51
SF3B5-201ENST00000367569 PDE8BO95263 885 aa18.24■□□□□ 0.51
SF3B5-201ENST00000367569 MYO3BQ8WXR4 1341 aa18.23■□□□□ 0.51
SF3B5-201ENST00000367569 COL1A1P02452 1464 aaPredicted RBP18.23■□□□□ 0.51
SF3B5-201ENST00000367569 F8W031 263 aaPredicted RBP18.23■□□□□ 0.51
SF3B5-201ENST00000367569 WNT10BO00744 389 aa18.23■□□□□ 0.51
SF3B5-201ENST00000367569 SLC10A3P09131 477 aa18.23■□□□□ 0.51
SF3B5-201ENST00000367569 PRAMEF18Q5VWM3 479 aa18.23■□□□□ 0.51
SF3B5-201ENST00000367569 TTLL5Q6EMB2 1281 aa18.23■□□□□ 0.51
SF3B5-201ENST00000367569 KIAA0825Q8IV33 1275 aa18.23■□□□□ 0.51
SF3B5-201ENST00000367569 OGFOD1Q8N543 542 aa18.23■□□□□ 0.51
SF3B5-201ENST00000367569 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.23■□□□□ 0.51
SF3B5-201ENST00000367569 ECM29Q5VYK3 1845 aa18.22■□□□□ 0.51
SF3B5-201ENST00000367569 CHAF1AQ13111 956 aaPredicted RBP18.22■□□□□ 0.51
SF3B5-201ENST00000367569 UBE4AQ14139 1066 aa18.22■□□□□ 0.51
SF3B5-201ENST00000367569 PUM3Q15397 648 aaKnown RBP18.22■□□□□ 0.51
SF3B5-201ENST00000367569 C15orf52Q6ZUT6 534 aaKnown RBP18.22■□□□□ 0.51
SF3B5-201ENST00000367569 MOB2Q70IA6 237 aa18.22■□□□□ 0.51
SF3B5-201ENST00000367569 CERS5Q8N5B7 392 aa18.22■□□□□ 0.51
SF3B5-201ENST00000367569 FAM84BQ96KN1 310 aaPredicted RBP18.22■□□□□ 0.51
SF3B5-201ENST00000367569 HDAC5Q9UQL6 1122 aa18.22■□□□□ 0.51
SF3B5-201ENST00000367569 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
SF3B5-201ENST00000367569 SASH1O94885 1247 aa18.21■□□□□ 0.51
SF3B5-201ENST00000367569 FKBP1BP68106 108 aa18.21■□□□□ 0.51
SF3B5-201ENST00000367569 MTX1Q13505 466 aa18.21■□□□□ 0.51
SF3B5-201ENST00000367569 MVPQ14764 893 aaKnown RBP18.21■□□□□ 0.51
SF3B5-201ENST00000367569 ATP2B3Q16720 1220 aa18.21■□□□□ 0.51
SF3B5-201ENST00000367569 RASAL3Q86YV0 1011 aa18.21■□□□□ 0.51
SF3B5-201ENST00000367569 CSRNP1Q96S65 589 aa18.21■□□□□ 0.51
SF3B5-201ENST00000367569 MCOLN1Q9GZU1 580 aa18.21■□□□□ 0.51
SF3B5-201ENST00000367569 COPRSQ9NQ92 184 aa18.21■□□□□ 0.51
SF3B5-201ENST00000367569 RNF186Q9NXI6 227 aa18.21■□□□□ 0.51
SF3B5-201ENST00000367569 PAPPA2Q9BXP8 1791 aa18.21■□□□□ 0.51
SF3B5-201ENST00000367569 AKAP11Q9UKA4 1901 aa18.2■□□□□ 0.5
SF3B5-201ENST00000367569 CCDC85CA6NKD9 419 aa18.2■□□□□ 0.5
SF3B5-201ENST00000367569 CIAO1O76071 339 aa18.2■□□□□ 0.5
SF3B5-201ENST00000367569 IL1R1P14778 569 aa18.2■□□□□ 0.5
SF3B5-201ENST00000367569 FGFR2P21802 821 aa18.2■□□□□ 0.5
SF3B5-201ENST00000367569 ADORA1P30542 326 aa18.2■□□□□ 0.5
SF3B5-201ENST00000367569 HIBADHP31937 336 aaKnown RBP18.2■□□□□ 0.5
SF3B5-201ENST00000367569 BCAMP50895 628 aa18.2■□□□□ 0.5
SF3B5-201ENST00000367569 TFCP2Q12800 502 aa18.2■□□□□ 0.5
SF3B5-201ENST00000367569 UBE2Q2LH0YL09 131 aa18.19■□□□□ 0.5
SF3B5-201ENST00000367569 TRPA1O75762 1119 aa18.19■□□□□ 0.5
SF3B5-201ENST00000367569 SLC5A1P13866 664 aa18.19■□□□□ 0.5
SF3B5-201ENST00000367569 IL15P40933 162 aaPredicted RBP18.19■□□□□ 0.5
SF3B5-201ENST00000367569 VPS37DQ86XT2 251 aa18.19■□□□□ 0.5
SF3B5-201ENST00000367569 ZBED3Q96IU2 234 aaPredicted RBP18.19■□□□□ 0.5
SF3B5-201ENST00000367569 SAGE1Q9NXZ1 904 aa18.19■□□□□ 0.5
SF3B5-201ENST00000367569 CEP126Q9P2H0 1117 aa18.19■□□□□ 0.5
SF3B5-201ENST00000367569 PCDHAC2Q9Y5I4 1007 aa18.19■□□□□ 0.5
SF3B5-201ENST00000367569 IFIT1P09914 478 aaKnown RBP18.18■□□□□ 0.5
SF3B5-201ENST00000367569 MMP14P50281 582 aa18.18■□□□□ 0.5
SF3B5-201ENST00000367569 DGKZQ13574 1117 aa18.18■□□□□ 0.5
SF3B5-201ENST00000367569 FRAT2O75474 233 aaPredicted RBP18.17■□□□□ 0.5
SF3B5-201ENST00000367569 GRIK5Q16478 980 aa18.17■□□□□ 0.5
SF3B5-201ENST00000367569 CEP85Q6P2H3 762 aa18.17■□□□□ 0.5
SF3B5-201ENST00000367569 TDRD7Q8NHU6 1098 aaKnown RBP18.17■□□□□ 0.5
SF3B5-201ENST00000367569 HDAC9Q9UKV0 1011 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms