RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TIGD1Q96MW7 591 aa13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 SPAG5Q96R06 1193 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 ATP5J2-PTCD1G3V325 749 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 NAA16Q6N069 864 aaPredicted RBP13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 MTHFSDQ2M296 383 aaKnown RBP13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 CCDC155Q8N6L0 562 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 ANKS4BQ8N8V4 417 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 C6orf50Q9HD87 102 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 MAGI3Q5TCQ9 1506 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 SSR1P43307 286 aaKnown RBP13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 TTC14Q96N46 770 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 STAMBPO95630 424 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 SKIDA1Q1XH10 827 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 KIAA0753Q2KHM9 967 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 LMBR1LQ6UX01 489 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 IDEP14735 1019 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 ERICH4A6NGS2 130 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 CLUL1Q15846 466 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 B4DLN1 442 aa13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
CDC42BPA-203ENST00000366766 NLRP3Q96P20 1036 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 HAND2P61296 217 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 TSHZ3Q63HK5 1081 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 SREK1Q8WXA9 508 aaKnown RBP13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 UNC13BO14795 1591 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 GIMAP7Q8NHV1 300 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 UBA5Q9GZZ9 404 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 STX8Q9UNK0 236 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 MAGI2Q86UL8 1455 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 RRAGBQ5VZM2 374 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 AATKQ6ZMQ8 1374 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 UTP14AQ9BVJ6 771 aaKnown RBP13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 SYCP3Q8IZU3 236 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 ARFGAP2Q8N6H7 521 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 IL13P35225 146 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 PIBF1Q8WXW3 757 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 SLC4A4Q9Y6R1 1079 aa13.65□□□□□ -0.22
CDC42BPA-203ENST00000366766 RPS6KB1P23443 525 aa13.65□□□□□ -0.23
CDC42BPA-203ENST00000366766 MYL5Q02045 173 aa13.65□□□□□ -0.23
CDC42BPA-203ENST00000366766 TICAM2Q86XR7 235 aa13.65□□□□□ -0.23
CDC42BPA-203ENST00000366766 JAKMIP2Q96AA8 810 aa13.65□□□□□ -0.23
CDC42BPA-203ENST00000366766 ABCC4O15439 1325 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 ACTN2P35609 894 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 LZTS2Q9BRK4 669 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 SGSM2O43147 1006 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 NEBLO76041 1014 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 CYP7A1P22680 504 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 CCDC186Q7Z3E2 898 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 MAP3K19Q56UN5 1328 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 PARP10Q53GL7 1025 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 AOPEPQ8N6M6 819 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 CCDC94Q9BW85 323 aaPredicted RBP13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 METTL22Q9BUU2 404 aaPredicted RBP13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 NUTM2BA6NNL0 878 aaPredicted RBP13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 NUTM2EB1AL46 878 aaPredicted RBP13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 GPTP24298 496 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 CCDC82Q8N4S0 544 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 PHACTR3Q96KR7 559 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 SETDB2Q96T68 719 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 NAP1L3Q99457 506 aaPredicted RBP13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 PLCD1P51178 756 aa13.64□□□□□ -0.23
CDC42BPA-203ENST00000366766 PTPDC1A2A3K4 754 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 CCDC77Q9BR77 488 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 TCERG1LQ5VWI1 586 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 ANGEL1Q9UNK9 670 aaKnown RBP13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 CTNNA2P26232 953 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 CBX1P83916 185 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 NOP2P46087 812 aaKnown RBP13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 SKAP1Q86WV1 359 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 ZCCHC11Q5TAX3 1644 aaKnown RBP13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 RRP36Q96EU6 259 aaKnown RBP13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 TSPOAP1O95153 1857 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 MAGEB6P1A0A0J9YX57 407 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 VWA3BQ502W6 1294 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 ATP2A1O14983 1001 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 RNMTO43148 476 aaKnown RBP13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 KRT13P13646 458 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 RPL13P26373 211 aaKnown RBP13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 NECAB1Q8N987 351 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 IKBKGQ9Y6K9 419 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 MAP3K4Q9Y6R4 1608 aa13.63□□□□□ -0.23
CDC42BPA-203ENST00000366766 EFCAB6Q5THR3 1501 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 CCDC42Q96M95 316 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 DEXIO95424 95 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 HOXC9P31274 260 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 LUC7L2Q9Y383 392 aaKnown RBP13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 DNAJC25Q9H1X3 360 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 SNRKQ9NRH2 765 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 ERBB4Q15303 1308 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 EYA1Q99502 592 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 RFC4P35249 363 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 VAV2P52735 878 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 C6orf163Q5TEZ5 329 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 DNAI1Q9UI46 699 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 ASIC1P78348 528 aa13.62□□□□□ -0.23
CDC42BPA-203ENST00000366766 TMCO5BA8MYB1 307 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 NF2P35240 595 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms