RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 SOX13Q9UN79 622 aa4.6□□□□□ -1.67
RNU6-428P-201ENST00000362942 LINC01387J3KSC0 135 aa4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 TRPA1O75762 1119 aa4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 ITPKAP23677 461 aa4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 FCGRTP55899 365 aa4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 NRG1Q02297 640 aaPredicted RBP4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 KCNMA1Q12791 1236 aa4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 PSMD2Q13200 908 aa4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 COL9A3Q14050 684 aaPredicted RBP4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 HP1BP3Q5SSJ5 553 aaPredicted RBP4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 FBXO33Q7Z6M2 555 aa4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 FBXO11Q86XK2 927 aa4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 TCF12Q99081 682 aa4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 DUSP9Q99956 384 aaKnown RBP4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 SOX17Q9H6I2 414 aaPredicted RBP4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 SEC31BQ9NQW1 1179 aa4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 WWC3Q9ULE0 1092 aa4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.59□□□□□ -1.67
RNU6-428P-201ENST00000362942 C9orf172C9J069 976 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 FSCN2O14926 492 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 SORBS3O60504 671 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 EPHA1P21709 976 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 BAG6P46379 1132 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 PPP2R3AQ06190 1150 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 PCDH1Q08174 1060 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 C19orf57Q0VDD7 668 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 IGF2-ASQ6U949 168 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 NXPE4Q6UWF7 544 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 GIPC2Q8TF65 315 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 HHIPQ96QV1 700 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 CEP44Q9C0F1 390 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 ABCB6Q9NP58 842 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 SH2B1Q9NRF2 756 aaPredicted RBP4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 PARP2Q9UGN5 583 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 PPM1HQ9ULR3 514 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 SAMM50Q9Y512 469 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 AK5Q9Y6K8 562 aa4.58□□□□□ -1.68
RNU6-428P-201ENST00000362942 ESRRAP11474 423 aaPredicted RBP4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 CDC25BP30305 580 aa4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 GRIA4P48058 902 aa4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 DAB2P98082 770 aa4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 RASSF7Q02833 373 aa4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 TMC4Q7Z404 712 aa4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 TMEM151AQ8N4L1 468 aa4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 GLIS3Q8NEA6 775 aa4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 SLC7A3Q8WY07 619 aa4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 MRPL18Q9H0U6 180 aaKnown RBP4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 ZNF576Q9H609 170 aa4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 USP21Q9UK80 565 aa4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 AKAP2Q9Y2D5 859 aa4.57□□□□□ -1.68
RNU6-428P-201ENST00000362942 METTL12A8MUP2 240 aa4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 GDF11O95390 407 aa4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 CYP11A1P05108 521 aa4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 USP17L7P0C7H9 530 aa4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 CD68P34810 354 aaPredicted RBP4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 SETDB1Q15047 1291 aa4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 SPRED3Q2MJR0 410 aa4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 TXNDC11Q6PKC3 985 aa4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 PI16Q6UXB8 463 aa4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 ILDR2Q71H61 639 aa4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 VN1R5Q7Z5H4 357 aa4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 ANKRD24Q8TF21 1146 aa4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 VTI1BQ9UEU0 232 aa4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 GPN3Q9UHW5 284 aaPredicted RBP4.56□□□□□ -1.68
RNU6-428P-201ENST00000362942 RBM47A0AV96 593 aaKnown RBP4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 FAM229AH3BQW9 127 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 DLL1O00548 723 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 SOX1O00570 391 aaPredicted RBP4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 B3GALT4O96024 378 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 COL8A1P27658 744 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 GSTM4Q03013 218 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 AP3B2Q13367 1082 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 DUOXA2Q1HG44 320 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 DIEXFQ68CQ4 756 aaKnown RBP4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 LENG1Q96BZ8 264 aaPredicted RBP4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 DCAF5Q96JK2 942 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 SETDB2Q96T68 719 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 CORO1BQ9BR76 489 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 EMILIN2Q9BXX0 1053 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 OSBPL7Q9BZF2 842 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 TMEM39AQ9NV64 488 aa4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 TTF2Q9UNY4 1162 aaKnown RBP4.55□□□□□ -1.68
RNU6-428P-201ENST00000362942 DEAF1O75398 565 aaPredicted RBP4.54□□□□□ -1.68
RNU6-428P-201ENST00000362942 RLBP1P12271 317 aa4.54□□□□□ -1.68
RNU6-428P-201ENST00000362942 ZNF16P17020 682 aaPredicted RBP4.54□□□□□ -1.68
RNU6-428P-201ENST00000362942 GRIK4Q16099 956 aa4.54□□□□□ -1.68
RNU6-428P-201ENST00000362942 TMEM130Q8N3G9 435 aa4.54□□□□□ -1.68
RNU6-428P-201ENST00000362942 RGS22Q8NE09 1264 aa4.54□□□□□ -1.68
RNU6-428P-201ENST00000362942 CRELD1Q96HD1 420 aa4.54□□□□□ -1.68
RNU6-428P-201ENST00000362942 CARD10Q9BWT7 1032 aa4.54□□□□□ -1.68
RNU6-428P-201ENST00000362942 LMNB1P20700 586 aa4.53□□□□□ -1.68
RNU6-428P-201ENST00000362942 ST13P50502 369 aaKnown RBP4.53□□□□□ -1.68
RNU6-428P-201ENST00000362942 LRRC14Q15048 493 aa4.53□□□□□ -1.68
RNU6-428P-201ENST00000362942 POU4F3Q15319 338 aa4.53□□□□□ -1.68
RNU6-428P-201ENST00000362942 TAF1CQ15572 869 aaPredicted RBP4.53□□□□□ -1.68
RNU6-428P-201ENST00000362942 ZNF423Q2M1K9 1284 aa4.53□□□□□ -1.68
RNU6-428P-201ENST00000362942 SV2BQ7L1I2 683 aa4.53□□□□□ -1.68
RNU6-428P-201ENST00000362942 KLHDC7BQ96G42 594 aa4.53□□□□□ -1.68
RNU6-428P-201ENST00000362942 USP26Q9BXU7 913 aa4.53□□□□□ -1.68
RNU6-428P-201ENST00000362942 CEP41Q9BYV8 373 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms