RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 HSPA8P11142 646 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-203ENST00000359265 ARID4AP29374 1257 aaPredicted RBP16.73■□□□□ 0.27
PDLIM5-203ENST00000359265 VEGFBP49765 207 aa16.73■□□□□ 0.27
PDLIM5-203ENST00000359265 DALRD3Q5D0E6 543 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-203ENST00000359265 CCDC102BQ68D86 513 aa16.73■□□□□ 0.27
PDLIM5-203ENST00000359265 STYK1Q6J9G0 422 aa16.73■□□□□ 0.27
PDLIM5-203ENST00000359265 C2CD5Q86YS7 1000 aa16.73■□□□□ 0.27
PDLIM5-203ENST00000359265 KBTBD3Q8NAB2 608 aa16.73■□□□□ 0.27
PDLIM5-203ENST00000359265 GOLIM4O00461 696 aa16.72■□□□□ 0.27
PDLIM5-203ENST00000359265 SGSM2O43147 1006 aa16.72■□□□□ 0.27
PDLIM5-203ENST00000359265 KCNJ4P48050 445 aa16.72■□□□□ 0.27
PDLIM5-203ENST00000359265 LRRFIP1Q32MZ4 808 aaKnown RBP16.72■□□□□ 0.27
PDLIM5-203ENST00000359265 AIDAQ96BJ3 306 aa16.72■□□□□ 0.27
PDLIM5-203ENST00000359265 EDC3Q96F86 508 aaKnown RBP16.72■□□□□ 0.27
PDLIM5-203ENST00000359265 USP26Q9BXU7 913 aa16.72■□□□□ 0.27
PDLIM5-203ENST00000359265 LTBP1Q14766 1721 aa16.71■□□□□ 0.27
PDLIM5-203ENST00000359265 PHKA1P46020 1223 aa16.71■□□□□ 0.27
PDLIM5-203ENST00000359265 CWC27Q6UX04 472 aaKnown RBP16.71■□□□□ 0.27
PDLIM5-203ENST00000359265 CNKSR1Q969H4 720 aa16.71■□□□□ 0.27
PDLIM5-203ENST00000359265 TMX4Q9H1E5 349 aaPredicted RBP16.71■□□□□ 0.27
PDLIM5-203ENST00000359265 ANO2Q9NQ90 1003 aa16.71■□□□□ 0.27
PDLIM5-203ENST00000359265 PPEF1O14829 653 aaPredicted RBP16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 POTEIP0CG38 1075 aa16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 POTEJP0CG39 1038 aa16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 MCCP23508 829 aa16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 CHRNA5P30532 468 aa16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 MCAMP43121 646 aa16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 FKBP4Q02790 459 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 NMIQ13287 307 aaPredicted RBP16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 SCARF1Q14162 830 aa16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 KIAA1211Q6ZU35 1233 aa16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 ZNF622Q969S3 477 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 IPO9Q96P70 1041 aaKnown RBP16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 NDUFB9Q9Y6M9 179 aa16.7■□□□□ 0.26
PDLIM5-203ENST00000359265 CCDC88AQ3V6T2 1871 aa16.69■□□□□ 0.26
PDLIM5-203ENST00000359265 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
PDLIM5-203ENST00000359265 TNRC18O15417 2968 aaPredicted RBP16.69■□□□□ 0.26
PDLIM5-203ENST00000359265 TTF1Q15361 905 aaPredicted RBP16.69■□□□□ 0.26
PDLIM5-203ENST00000359265 SNRKQ9NRH2 765 aa16.69■□□□□ 0.26
PDLIM5-203ENST00000359265 GNL3LQ9NVN8 582 aaKnown RBP16.69■□□□□ 0.26
PDLIM5-203ENST00000359265 XDHP47989 1333 aa16.69■□□□□ 0.26
PDLIM5-203ENST00000359265 MED23Q9ULK4 1368 aa16.68■□□□□ 0.26
PDLIM5-203ENST00000359265 SNAP23O00161 211 aa16.68■□□□□ 0.26
PDLIM5-203ENST00000359265 ZAP70P43403 619 aa16.68■□□□□ 0.26
PDLIM5-203ENST00000359265 CAVIN4Q5BKX8 364 aa16.68■□□□□ 0.26
PDLIM5-203ENST00000359265 SP8Q8IXZ3 490 aa16.68■□□□□ 0.26
PDLIM5-203ENST00000359265 ANKIB1Q9P2G1 1089 aa16.68■□□□□ 0.26
PDLIM5-203ENST00000359265 LEMD3Q9Y2U8 911 aa16.68■□□□□ 0.26
PDLIM5-203ENST00000359265 ZNF804BA4D1E1 1349 aa16.68■□□□□ 0.26
PDLIM5-203ENST00000359265 ZC3H4Q9UPT8 1303 aaKnown RBP16.68■□□□□ 0.26
PDLIM5-203ENST00000359265 A0A0D9SFI3 127 aa16.67■□□□□ 0.26
PDLIM5-203ENST00000359265 ZFYP08048 801 aaPredicted RBP16.67■□□□□ 0.26
PDLIM5-203ENST00000359265 FAM227BQ96M60 508 aa16.67■□□□□ 0.26
PDLIM5-203ENST00000359265 IL25Q9H293 177 aa16.67■□□□□ 0.26
PDLIM5-203ENST00000359265 ATP6V0A2Q9Y487 856 aa16.67■□□□□ 0.26
PDLIM5-203ENST00000359265 SLX4Q8IY92 1834 aa16.66■□□□□ 0.26
PDLIM5-203ENST00000359265 BCAMP50895 628 aa16.66■□□□□ 0.26
PDLIM5-203ENST00000359265 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
PDLIM5-203ENST00000359265 CHADLQ6NUI6 762 aa16.66■□□□□ 0.26
PDLIM5-203ENST00000359265 VPS37DQ86XT2 251 aa16.66■□□□□ 0.26
PDLIM5-203ENST00000359265 SPATA5Q8NB90 893 aa16.66■□□□□ 0.26
PDLIM5-203ENST00000359265 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDLIM5-203ENST00000359265 ANTXR1Q9H6X2 564 aa16.66■□□□□ 0.26
PDLIM5-203ENST00000359265 DUOX1Q9NRD9 1551 aa16.66■□□□□ 0.26
PDLIM5-203ENST00000359265 HMG20BQ9P0W2 317 aa16.66■□□□□ 0.26
PDLIM5-203ENST00000359265 RNF113AO15541 343 aaKnown RBP16.65■□□□□ 0.26
PDLIM5-203ENST00000359265 LMNB1P20700 586 aa16.65■□□□□ 0.26
PDLIM5-203ENST00000359265 RASGRF1Q13972 1273 aa16.65■□□□□ 0.26
PDLIM5-203ENST00000359265 BECN1Q14457 450 aa16.65■□□□□ 0.26
PDLIM5-203ENST00000359265 PRPF40BQ6NWY9 871 aaKnown RBP16.65■□□□□ 0.26
PDLIM5-203ENST00000359265 PI16Q6UXB8 463 aa16.65■□□□□ 0.26
PDLIM5-203ENST00000359265 LSG1Q9H089 658 aaKnown RBP16.65■□□□□ 0.26
PDLIM5-203ENST00000359265 HELLSQ9NRZ9 838 aa16.65■□□□□ 0.26
PDLIM5-203ENST00000359265 PODXL2Q9NZ53 605 aa16.65■□□□□ 0.26
PDLIM5-203ENST00000359265 CCDC171Q6TFL3 1326 aa16.65■□□□□ 0.26
PDLIM5-203ENST00000359265 SEMA3EO15041 775 aa16.64■□□□□ 0.25
PDLIM5-203ENST00000359265 ATP2B4P23634 1241 aa16.64■□□□□ 0.25
PDLIM5-203ENST00000359265 GYG1P46976 350 aa16.64■□□□□ 0.25
PDLIM5-203ENST00000359265 ZMYM1Q5SVZ6 1142 aa16.64■□□□□ 0.25
PDLIM5-203ENST00000359265 CC2D2BQ6DHV5 1058 aa16.64■□□□□ 0.25
PDLIM5-203ENST00000359265 TTLL6Q8N841 843 aa16.64■□□□□ 0.25
PDLIM5-203ENST00000359265 GGA1Q9UJY5 639 aa16.64■□□□□ 0.25
PDLIM5-203ENST00000359265 ZBTB22O15209 634 aa16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 CYP2E1P05181 493 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 ANAPC15P60006 121 aa16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 GPSM2P81274 684 aa16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 MCMDC2Q4G0Z9 681 aa16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 GRIPAP1Q4V328 841 aa16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 FBXO33Q7Z6M2 555 aa16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 FAM84BQ96KN1 310 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 DAXXQ9UER7 740 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 DENND2AQ9ULE3 1009 aa16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 NSFL1CQ9UNZ2 370 aaKnown RBP16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 PDS5AQ29RF7 1337 aaKnown RBP16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 PASKQ96RG2 1323 aa16.63■□□□□ 0.25
PDLIM5-203ENST00000359265 COL1A1P02452 1464 aaPredicted RBP16.62■□□□□ 0.25
PDLIM5-203ENST00000359265 UFL1O94874 794 aa16.62■□□□□ 0.25
PDLIM5-203ENST00000359265 HIBADHP31937 336 aaKnown RBP16.62■□□□□ 0.25
PDLIM5-203ENST00000359265 HSPA4P34932 840 aa16.62■□□□□ 0.25
PDLIM5-203ENST00000359265 RABEP1Q15276 862 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms