RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ZBTB9Q96C00 473 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 ZKSCAN3Q9BRR0 538 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 CCDC102BQ68D86 513 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.15□□□□□ -0.14
COL20A1-201ENST00000358894 SLC4A4Q9Y6R1 1079 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 V9GYY5 206 aaPredicted RBP14.15□□□□□ -0.14
COL20A1-201ENST00000358894 IRX3P78415 501 aaPredicted RBP14.15□□□□□ -0.14
COL20A1-201ENST00000358894 CEP135Q66GS9 1140 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 MAGEB6Q8N7X4 407 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 TIGD1Q96MW7 591 aa14.15□□□□□ -0.14
COL20A1-201ENST00000358894 HSPD1P10809 573 aaKnown RBP14.14□□□□□ -0.15
COL20A1-201ENST00000358894 FAM160A1Q05DH4 1040 aa14.14□□□□□ -0.15
COL20A1-201ENST00000358894 WTAPQ15007 396 aa14.14□□□□□ -0.15
COL20A1-201ENST00000358894 IQCA1Q86XH1 822 aa14.14□□□□□ -0.15
COL20A1-201ENST00000358894 CPLX3Q8WVH0 158 aa14.14□□□□□ -0.15
COL20A1-201ENST00000358894 APPBP2Q92624 585 aa14.14□□□□□ -0.15
COL20A1-201ENST00000358894 CWC15Q9P013 229 aaKnown RBP14.14□□□□□ -0.15
COL20A1-201ENST00000358894 URI1O94763 535 aaPredicted RBP14.14□□□□□ -0.15
COL20A1-201ENST00000358894 USP28Q96RU2 1077 aa14.14□□□□□ -0.15
COL20A1-201ENST00000358894 MYL10Q9BUA6 226 aa14.14□□□□□ -0.15
COL20A1-201ENST00000358894 RNF41Q9H4P4 317 aaPredicted RBP14.14□□□□□ -0.15
COL20A1-201ENST00000358894 ZNF500O60304 480 aaPredicted RBP14.14□□□□□ -0.15
COL20A1-201ENST00000358894 NEMFO60524 1076 aa14.14□□□□□ -0.15
COL20A1-201ENST00000358894 MTX1Q13505 466 aa14.14□□□□□ -0.15
COL20A1-201ENST00000358894 ANKARQ7Z5J8 1434 aa14.13□□□□□ -0.15
COL20A1-201ENST00000358894 PATL2C9JE40 543 aaKnown RBP14.13□□□□□ -0.15
COL20A1-201ENST00000358894 CYP7A1P22680 504 aa14.13□□□□□ -0.15
COL20A1-201ENST00000358894 GSDMDP57764 484 aa14.13□□□□□ -0.15
COL20A1-201ENST00000358894 PIP4K2BP78356 416 aa14.13□□□□□ -0.15
COL20A1-201ENST00000358894 LLPHQ9BRT6 129 aaKnown RBP14.13□□□□□ -0.15
COL20A1-201ENST00000358894 BTG4Q9NY30 223 aa14.13□□□□□ -0.15
COL20A1-201ENST00000358894 SCRN1Q12765 414 aa14.13□□□□□ -0.15
COL20A1-201ENST00000358894 TTC14Q96N46 770 aa14.13□□□□□ -0.15
COL20A1-201ENST00000358894 CEP131Q9UPN4 1083 aa14.13□□□□□ -0.15
COL20A1-201ENST00000358894 ZNF652Q9Y2D9 606 aa14.13□□□□□ -0.15
COL20A1-201ENST00000358894 NRKQ7Z2Y5 1582 aa14.13□□□□□ -0.15
COL20A1-201ENST00000358894 FTOQ9C0B1 505 aaKnown RBP eCLIP14.13□□□□□ -0.15
COL20A1-201ENST00000358894 NCOA3Q9Y6Q9 1424 aa14.13□□□□□ -0.15
COL20A1-201ENST00000358894 CTCFLQ8NI51 663 aaPredicted RBP14.12□□□□□ -0.15
COL20A1-201ENST00000358894 UBXN4Q92575 508 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 IFNKQ9P0W0 207 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 CLSTN1O94985 981 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 MBD4O95243 580 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 RTN1Q16799 776 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 PHKBQ93100 1093 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 NIP7Q9Y221 180 aaKnown RBP eCLIP14.12□□□□□ -0.15
COL20A1-201ENST00000358894 PTPRUQ92729 1446 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 A0A087WWV3 80 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 CYP27B1O15528 508 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 ADORA1P30542 326 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 ATP6V1AP38606 617 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 UBASH3AP57075 661 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 SETQ01105 290 aaPredicted RBP14.12□□□□□ -0.15
COL20A1-201ENST00000358894 LRMPQ12912 555 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 SNW1Q13573 536 aaKnown RBP14.12□□□□□ -0.15
COL20A1-201ENST00000358894 DSCC1Q9BVC3 393 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 HSP90B2PQ58FF3 399 aa14.12□□□□□ -0.15
COL20A1-201ENST00000358894 ZNF75DP51815 510 aa14.11□□□□□ -0.15
COL20A1-201ENST00000358894 TCIRG1Q13488 830 aa14.11□□□□□ -0.15
COL20A1-201ENST00000358894 SMARCE1Q969G3 411 aa14.11□□□□□ -0.15
COL20A1-201ENST00000358894 TMEM94Q12767 1356 aa14.11□□□□□ -0.15
COL20A1-201ENST00000358894 ATP2B2Q01814 1243 aa14.11□□□□□ -0.15
COL20A1-201ENST00000358894 DHX8Q14562 1220 aaKnown RBP14.11□□□□□ -0.15
COL20A1-201ENST00000358894 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
COL20A1-201ENST00000358894 AK9Q5TCS8 1911 aa14.11□□□□□ -0.15
COL20A1-201ENST00000358894 CCDC152Q4G0S7 254 aa14.11□□□□□ -0.15
COL20A1-201ENST00000358894 PI16Q6UXB8 463 aa14.11□□□□□ -0.15
COL20A1-201ENST00000358894 CATIPQ7Z7H3 387 aa14.11□□□□□ -0.15
COL20A1-201ENST00000358894 CDC5LQ99459 802 aaKnown RBP14.11□□□□□ -0.15
COL20A1-201ENST00000358894 CEP170BQ9Y4F5 1589 aaPredicted RBP14.1□□□□□ -0.15
COL20A1-201ENST00000358894 CHGBP05060 677 aa14.1□□□□□ -0.15
COL20A1-201ENST00000358894 NAA16Q6N069 864 aaPredicted RBP14.1□□□□□ -0.15
COL20A1-201ENST00000358894 AFMP43652 599 aa14.1□□□□□ -0.15
COL20A1-201ENST00000358894 ANGEL1Q9UNK9 670 aaKnown RBP14.1□□□□□ -0.15
COL20A1-201ENST00000358894 KIF2AO00139 706 aaPredicted RBP14.1□□□□□ -0.15
COL20A1-201ENST00000358894 BRAPQ7Z569 592 aa14.1□□□□□ -0.15
COL20A1-201ENST00000358894 TSPYL1Q9H0U9 437 aa14.1□□□□□ -0.15
COL20A1-201ENST00000358894 TECPR2O15040 1411 aa14.1□□□□□ -0.15
COL20A1-201ENST00000358894 AGLP35573 1532 aa14.1□□□□□ -0.15
COL20A1-201ENST00000358894 FGAP02671 866 aa14.09□□□□□ -0.15
COL20A1-201ENST00000358894 U2AF2P26368 475 aaKnown RBP eCLIP14.09□□□□□ -0.15
COL20A1-201ENST00000358894 USP5P45974 858 aa14.09□□□□□ -0.15
COL20A1-201ENST00000358894 DZIP1Q86YF9 867 aaKnown RBP14.09□□□□□ -0.15
COL20A1-201ENST00000358894 KRT23Q9C075 422 aa14.09□□□□□ -0.15
COL20A1-201ENST00000358894 ARMT1Q9H993 441 aa14.09□□□□□ -0.15
COL20A1-201ENST00000358894 PFKFB2O60825 505 aa14.09□□□□□ -0.15
COL20A1-201ENST00000358894 NLRP5P59047 1200 aa14.09□□□□□ -0.15
COL20A1-201ENST00000358894 SPECC1Q5M775 1068 aa14.09□□□□□ -0.15
COL20A1-201ENST00000358894 DHX37Q8IY37 1157 aaKnown RBP14.09□□□□□ -0.15
COL20A1-201ENST00000358894 MKNK2Q9HBH9 465 aa14.09□□□□□ -0.15
COL20A1-201ENST00000358894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.09□□□□□ -0.15
COL20A1-201ENST00000358894 KIF20BQ96Q89 1820 aa14.09□□□□□ -0.15
COL20A1-201ENST00000358894 MYO5BQ9ULV0 1848 aa14.09□□□□□ -0.15
COL20A1-201ENST00000358894 RIOK3O14730 519 aaKnown RBP14.09□□□□□ -0.15
COL20A1-201ENST00000358894 TERF1P54274 439 aa14.09□□□□□ -0.15
COL20A1-201ENST00000358894 ANO1Q5XXA6 986 aa14.09□□□□□ -0.15
COL20A1-201ENST00000358894 MAGEC2Q9UBF1 373 aaPredicted RBP14.09□□□□□ -0.15
COL20A1-201ENST00000358894 NAP1L1P55209 391 aaKnown RBP14.08□□□□□ -0.15
COL20A1-201ENST00000358894 NPHP4O75161 1426 aaPredicted RBP14.08□□□□□ -0.16
COL20A1-201ENST00000358894 ADD1P35611 737 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms