RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 SSRP1Q08945 709 aaKnown RBP16.55■□□□□ 0.24
SIRPA-202ENST00000358771 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
SIRPA-202ENST00000358771 C16orf45Q96MC5 204 aaPredicted RBP16.55■□□□□ 0.24
SIRPA-202ENST00000358771 PRDM1O75626 825 aa16.55■□□□□ 0.24
SIRPA-202ENST00000358771 PCCAP05165 728 aaPredicted RBP16.55■□□□□ 0.24
SIRPA-202ENST00000358771 TPM2P07951 284 aa16.55■□□□□ 0.24
SIRPA-202ENST00000358771 SLC3A2P08195 630 aaKnown RBP16.55■□□□□ 0.24
SIRPA-202ENST00000358771 ERBB4Q15303 1308 aa16.55■□□□□ 0.24
SIRPA-202ENST00000358771 FAM177A1Q8N128 213 aaPredicted RBP16.54■□□□□ 0.24
SIRPA-202ENST00000358771 TRMT1Q9NXH9 659 aaKnown RBP16.54■□□□□ 0.24
SIRPA-202ENST00000358771 UBR1Q8IWV7 1749 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 TPM3P06753 285 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 ATP2B2Q01814 1243 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 CTDSPL2Q05D32 466 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 UVSSAQ2YD98 709 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 FAM182BQ5T319 152 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 DZIP1Q86YF9 867 aaKnown RBP16.54■□□□□ 0.24
SIRPA-202ENST00000358771 VSIG10Q8N0Z9 540 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 MAP3K15Q6ZN16 1313 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 A0A087WWV3 80 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 M0R2C6 588 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 WTAPQ15007 396 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 LMTK3Q96Q04 1460 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 ARHGAP23Q9P227 1491 aa16.54■□□□□ 0.24
SIRPA-202ENST00000358771 PUM3Q15397 648 aaKnown RBP16.53■□□□□ 0.24
SIRPA-202ENST00000358771 CCDC102BQ68D86 513 aa16.53■□□□□ 0.24
SIRPA-202ENST00000358771 DSCC1Q9BVC3 393 aa16.53■□□□□ 0.24
SIRPA-202ENST00000358771 SEC31BQ9NQW1 1179 aa16.53■□□□□ 0.24
SIRPA-202ENST00000358771 NR1I2O75469 434 aa16.53■□□□□ 0.24
SIRPA-202ENST00000358771 KLHL10Q6JEL2 608 aa16.53■□□□□ 0.24
SIRPA-202ENST00000358771 PUS7LQ9H0K6 701 aaKnown RBP16.53■□□□□ 0.24
SIRPA-202ENST00000358771 ADD1P35611 737 aaKnown RBP16.53■□□□□ 0.24
SIRPA-202ENST00000358771 IQCA1Q86XH1 822 aa16.53■□□□□ 0.24
SIRPA-202ENST00000358771 MRPS27Q92552 414 aaKnown RBP16.53■□□□□ 0.24
SIRPA-202ENST00000358771 USP5P45974 858 aa16.53■□□□□ 0.24
SIRPA-202ENST00000358771 ZMYM1Q5SVZ6 1142 aa16.53■□□□□ 0.24
SIRPA-202ENST00000358771 SPTLC2O15270 562 aa16.52■□□□□ 0.24
SIRPA-202ENST00000358771 BCAMP50895 628 aa16.52■□□□□ 0.24
SIRPA-202ENST00000358771 CFAP100Q494V2 611 aa16.52■□□□□ 0.24
SIRPA-202ENST00000358771 NLRP10Q86W26 655 aa16.52■□□□□ 0.24
SIRPA-202ENST00000358771 USP28Q96RU2 1077 aa16.52■□□□□ 0.24
SIRPA-202ENST00000358771 CCDC87Q9NVE4 849 aa16.52■□□□□ 0.24
SIRPA-202ENST00000358771 ANKRD26Q9UPS8 1709 aa16.52■□□□□ 0.24
SIRPA-202ENST00000358771 TNS3Q68CZ2 1445 aa16.52■□□□□ 0.24
SIRPA-202ENST00000358771 UBAP1LF5GYI3 381 aa16.52■□□□□ 0.23
SIRPA-202ENST00000358771 TOB2Q14106 344 aaPredicted RBP16.52■□□□□ 0.23
SIRPA-202ENST00000358771 SLIT1O75093 1534 aa16.52■□□□□ 0.23
SIRPA-202ENST00000358771 PTGS1P23219 599 aa16.52■□□□□ 0.23
SIRPA-202ENST00000358771 CMTR1Q8N1G2 835 aaKnown RBP16.52■□□□□ 0.23
SIRPA-202ENST00000358771 CNNM3Q8NE01 707 aa16.52■□□□□ 0.23
SIRPA-202ENST00000358771 SETDB2Q96T68 719 aa16.52■□□□□ 0.23
SIRPA-202ENST00000358771 ATG3Q9NT62 314 aa16.52■□□□□ 0.23
SIRPA-202ENST00000358771 FOXO4P98177 505 aa16.51■□□□□ 0.23
SIRPA-202ENST00000358771 STX1AQ16623 288 aa16.51■□□□□ 0.23
SIRPA-202ENST00000358771 AOPEPQ8N6M6 819 aa16.51■□□□□ 0.23
SIRPA-202ENST00000358771 LPIN2Q92539 896 aa16.51■□□□□ 0.23
SIRPA-202ENST00000358771 NLRP3Q96P20 1036 aa16.51■□□□□ 0.23
SIRPA-202ENST00000358771 RNF41Q9H4P4 317 aaPredicted RBP16.51■□□□□ 0.23
SIRPA-202ENST00000358771 GJB4Q9NTQ9 266 aa16.51■□□□□ 0.23
SIRPA-202ENST00000358771 SCARF1Q14162 830 aa16.51■□□□□ 0.23
SIRPA-202ENST00000358771 MKNK2Q9HBH9 465 aa16.51■□□□□ 0.23
SIRPA-202ENST00000358771 NOL7Q9UMY1 257 aaKnown RBP16.51■□□□□ 0.23
SIRPA-202ENST00000358771 NRXN3Q9Y4C0 1643 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 hCG_1642624A0A1W2PR95 340 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 PDE8BO95263 885 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 NOLC1Q14978 699 aaKnown RBP eCLIP16.5■□□□□ 0.23
SIRPA-202ENST00000358771 RTN1Q16799 776 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 NAA16Q6N069 864 aaPredicted RBP16.5■□□□□ 0.23
SIRPA-202ENST00000358771 SPATA5Q8NB90 893 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 WASF1Q92558 559 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 ANGEL1Q9UNK9 670 aaKnown RBP16.5■□□□□ 0.23
SIRPA-202ENST00000358771 CCDC196A0A1B0GTZ2 297 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 CTAGE5O15320 804 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 PPP1R9BQ96SB3 815 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 PDE6AP16499 860 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 PDIA3P30101 505 aaKnown RBP16.5■□□□□ 0.23
SIRPA-202ENST00000358771 SYKP43405 635 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 TFCP2L1Q9NZI6 479 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 NCOA3Q9Y6Q9 1424 aa16.5■□□□□ 0.23
SIRPA-202ENST00000358771 TTLL11Q8NHH1 800 aa16.49■□□□□ 0.23
SIRPA-202ENST00000358771 A0A0G2JLW4 131 aa16.49■□□□□ 0.23
SIRPA-202ENST00000358771 TSPY2A6NKD2 308 aa16.49■□□□□ 0.23
SIRPA-202ENST00000358771 GYG1P46976 350 aa16.49■□□□□ 0.23
SIRPA-202ENST00000358771 SPECC1Q5M775 1068 aa16.49■□□□□ 0.23
SIRPA-202ENST00000358771 ATG9AQ7Z3C6 839 aa16.49■□□□□ 0.23
SIRPA-202ENST00000358771 CTCFLQ8NI51 663 aaPredicted RBP16.49■□□□□ 0.23
SIRPA-202ENST00000358771 FER1L4A9Z1Z3 1794 aa16.49■□□□□ 0.23
SIRPA-202ENST00000358771 LOC102724428A0A0B4J2F2 783 aa16.49■□□□□ 0.23
SIRPA-202ENST00000358771 GNPATO15228 680 aa16.49■□□□□ 0.23
SIRPA-202ENST00000358771 SIK1P57059 783 aa16.49■□□□□ 0.23
SIRPA-202ENST00000358771 MEGF6O75095 1541 aa16.48■□□□□ 0.23
SIRPA-202ENST00000358771 LMOD1P29536 600 aaPredicted RBP16.48■□□□□ 0.23
SIRPA-202ENST00000358771 RFC4P35249 363 aa16.48■□□□□ 0.23
SIRPA-202ENST00000358771 WWC3Q9ULE0 1092 aa16.48■□□□□ 0.23
SIRPA-202ENST00000358771 CLEC17AQ6ZS10 378 aa16.48■□□□□ 0.23
SIRPA-202ENST00000358771 SMIM5Q71RC9 77 aa16.48■□□□□ 0.23
SIRPA-202ENST00000358771 CATIPQ7Z7H3 387 aa16.48■□□□□ 0.23
SIRPA-202ENST00000358771 KCNG4Q8TDN1 519 aa16.48■□□□□ 0.23
SIRPA-202ENST00000358771 CBX8Q9HC52 389 aa16.48■□□□□ 0.23
SIRPA-202ENST00000358771 DLG5Q8TDM6 1919 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms