RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 APPBP2Q92624 585 aa20.52■□□□□ 0.88
TPM1-205ENST00000357980 GGA1Q9UJY5 639 aa20.52■□□□□ 0.88
TPM1-205ENST00000357980 DENND2AQ9ULE3 1009 aa20.52■□□□□ 0.88
TPM1-205ENST00000357980 RABEP1Q15276 862 aa20.51■□□□□ 0.87
TPM1-205ENST00000357980 M0R2C6 588 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 PDE6AP16499 860 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 NECTIN1Q15223 517 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 UBE3CQ15386 1083 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 SLC9C2Q5TAH2 1124 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 TBC1D16Q8TBP0 767 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 KCNB2Q92953 911 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 TBC1D2Q9BYX2 928 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 POLLQ9UGP5 575 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 WWC3Q9ULE0 1092 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 TCRBV5S4A2TA0A5A2 114 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 CHRNA5P30532 468 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 ZNF622Q969S3 477 aaKnown RBP eCLIP20.5■□□□□ 0.876e-7■■□□□ 13.8
TPM1-205ENST00000357980 SNX21Q969T3 373 aa20.5■□□□□ 0.87
TPM1-205ENST00000357980 RBM8AQ9Y5S9 174 aaKnown RBP20.5■□□□□ 0.87
TPM1-205ENST00000357980 MAP3K12Q12852 859 aa20.49■□□□□ 0.87
TPM1-205ENST00000357980 BECN1Q14457 450 aa20.49■□□□□ 0.87
TPM1-205ENST00000357980 GPR101Q96P66 508 aaPredicted RBP20.49■□□□□ 0.87
TPM1-205ENST00000357980 WASHC4Q2M389 1173 aa20.48■□□□□ 0.87
TPM1-205ENST00000357980 PRPF40BQ6NWY9 871 aaKnown RBP20.48■□□□□ 0.87
TPM1-205ENST00000357980 PUS7LQ9H0K6 701 aaKnown RBP20.48■□□□□ 0.87
TPM1-205ENST00000357980 MAST2Q6P0Q8 1798 aa20.48■□□□□ 0.87
TPM1-205ENST00000357980 ZNF532Q9HCE3 1301 aa20.48■□□□□ 0.87
TPM1-205ENST00000357980 ZBTB7AO95365 584 aa20.48■□□□□ 0.87
TPM1-205ENST00000357980 OLFM4Q6UX06 510 aa20.48■□□□□ 0.87
TPM1-205ENST00000357980 ZNF804AQ7Z570 1209 aa20.48■□□□□ 0.87
TPM1-205ENST00000357980 RASEFQ8IZ41 740 aa20.48■□□□□ 0.87
TPM1-205ENST00000357980 SNX14Q9Y5W7 946 aa20.48■□□□□ 0.87
TPM1-205ENST00000357980 KIAA1551Q9HCM1 1747 aa20.47■□□□□ 0.87
TPM1-205ENST00000357980 SLC4A3P48751 1232 aa20.47■□□□□ 0.87
TPM1-205ENST00000357980 TDRD7Q8NHU6 1098 aaKnown RBP20.47■□□□□ 0.87
TPM1-205ENST00000357980 CNKSR1Q969H4 720 aa20.47■□□□□ 0.87
TPM1-205ENST00000357980 DSCC1Q9BVC3 393 aa20.47■□□□□ 0.87
TPM1-205ENST00000357980 MTFR1LQ9H019 292 aa20.47■□□□□ 0.87
TPM1-205ENST00000357980 CD2BP2O95400 341 aaKnown RBP20.46■□□□□ 0.87
TPM1-205ENST00000357980 VPS53Q5VIR6 699 aa20.46■□□□□ 0.87
TPM1-205ENST00000357980 CCDC88AQ3V6T2 1871 aa20.46■□□□□ 0.87
TPM1-205ENST00000357980 FRAT2O75474 233 aaPredicted RBP20.46■□□□□ 0.87
TPM1-205ENST00000357980 HSPD1P10809 573 aaKnown RBP20.46■□□□□ 0.87
TPM1-205ENST00000357980 R3HDM1Q15032 1099 aaKnown RBP20.46■□□□□ 0.87
TPM1-205ENST00000357980 CREB3L3Q68CJ9 461 aa20.46■□□□□ 0.87
TPM1-205ENST00000357980 MAGEB6Q8N7X4 407 aa20.46■□□□□ 0.87
TPM1-205ENST00000357980 LRP2BPQ9P2M1 347 aa20.46■□□□□ 0.87
TPM1-205ENST00000357980 FOXP2O15409 715 aa20.45■□□□□ 0.86
TPM1-205ENST00000357980 MPNDQ8N594 471 aa20.45■□□□□ 0.86
TPM1-205ENST00000357980 SNED1Q8TER0 1413 aa20.45■□□□□ 0.86
TPM1-205ENST00000357980 C6orf229H3BNL8 230 aa20.44■□□□□ 0.86
TPM1-205ENST00000357980 SLC27A2O14975 620 aa20.44■□□□□ 0.86
TPM1-205ENST00000357980 GPAA1O43292 621 aa20.44■□□□□ 0.86
TPM1-205ENST00000357980 IL1R1P14778 569 aa20.44■□□□□ 0.86
TPM1-205ENST00000357980 C7orf43Q8WVR3 580 aa20.44■□□□□ 0.86
TPM1-205ENST00000357980 ABCF2Q9UG63 623 aa20.44■□□□□ 0.86
TPM1-205ENST00000357980 U3KPZ7 1027 aaPredicted RBP20.44■□□□□ 0.86
TPM1-205ENST00000357980 CHD4Q14839 1912 aa20.44■□□□□ 0.86
TPM1-205ENST00000357980 DPP8Q6V1X1 898 aaPredicted RBP20.43■□□□□ 0.86
TPM1-205ENST00000357980 HSCBQ8IWL3 235 aa20.43■□□□□ 0.86
TPM1-205ENST00000357980 CD209Q9NNX6 404 aa20.43■□□□□ 0.86
TPM1-205ENST00000357980 DAXXQ9UER7 740 aaPredicted RBP20.43■□□□□ 0.86
TPM1-205ENST00000357980 SALL1Q9NSC2 1324 aa20.43■□□□□ 0.86
TPM1-205ENST00000357980 CHAF1AQ13111 956 aaPredicted RBP20.42■□□□□ 0.86
TPM1-205ENST00000357980 TSGA10IPQ3SY00 556 aa20.42■□□□□ 0.86
TPM1-205ENST00000357980 RNF20Q5VTR2 975 aa20.42■□□□□ 0.86
TPM1-205ENST00000357980 ZNF384Q8TF68 577 aa20.42■□□□□ 0.86
TPM1-205ENST00000357980 TMX4Q9H1E5 349 aaPredicted RBP20.42■□□□□ 0.86
TPM1-205ENST00000357980 ATF5Q9Y2D1 282 aaPredicted RBP20.42■□□□□ 0.86
TPM1-205ENST00000357980 ZKSCAN1P17029 563 aaPredicted RBP20.41■□□□□ 0.86
TPM1-205ENST00000357980 KCNA3P22001 575 aa20.41■□□□□ 0.86
TPM1-205ENST00000357980 RAI14Q9P0K7 980 aa20.41■□□□□ 0.86
TPM1-205ENST00000357980 RPAP1Q9BWH6 1393 aaPredicted RBP20.41■□□□□ 0.86
TPM1-205ENST00000357980 GOLGB1Q14789 3259 aaKnown RBP20.41■□□□□ 0.86
TPM1-205ENST00000357980 ST18O60284 1047 aa20.41■□□□□ 0.86
TPM1-205ENST00000357980 NEK4P51957 841 aa20.41■□□□□ 0.86
TPM1-205ENST00000357980 ADCK5Q3MIX3 580 aa20.41■□□□□ 0.86
TPM1-205ENST00000357980 IL27Q8NEV9 243 aa20.41■□□□□ 0.86
TPM1-205ENST00000357980 WDR66Q8TBY9 1149 aa20.41■□□□□ 0.86
TPM1-205ENST00000357980 SGIP1Q9BQI5 828 aa20.41■□□□□ 0.86
TPM1-205ENST00000357980 TAF6LQ9Y6J9 622 aa20.41■□□□□ 0.86
TPM1-205ENST00000357980 BRCA1P38398 1863 aaKnown RBP20.4■□□□□ 0.86
TPM1-205ENST00000357980 POLD1P28340 1107 aa20.4■□□□□ 0.86
TPM1-205ENST00000357980 ADGRA1Q86SQ6 560 aa20.4■□□□□ 0.86
TPM1-205ENST00000357980 STRBPQ96SI9 672 aaKnown RBP20.4■□□□□ 0.86
TPM1-205ENST00000357980 UPF3BQ9BZI7 483 aaKnown RBP20.4■□□□□ 0.86
TPM1-205ENST00000357980 TM6SF1Q9BZW5 370 aa20.4■□□□□ 0.86
TPM1-205ENST00000357980 LAMA4Q16363 1823 aa20.4■□□□□ 0.86
TPM1-205ENST00000357980 PRDX5P30044 214 aa20.39■□□□□ 0.86
TPM1-205ENST00000357980 ERICH6Q7L0X2 663 aa20.39■□□□□ 0.86
TPM1-205ENST00000357980 ZGPATQ8N5A5 531 aaKnown RBP20.39■□□□□ 0.86
TPM1-205ENST00000357980 AIDAQ96BJ3 306 aa20.39■□□□□ 0.86
TPM1-205ENST00000357980 NSUN4Q96CB9 384 aaKnown RBP20.39■□□□□ 0.86
TPM1-205ENST00000357980 RTFDC1Q9BY42 306 aaPredicted RBP20.39■□□□□ 0.86
TPM1-205ENST00000357980 JAG2Q9Y219 1238 aa20.39■□□□□ 0.86
TPM1-205ENST00000357980 K7ELQ4 463 aaPredicted RBP20.39■□□□□ 0.85
TPM1-205ENST00000357980 IGSF3O75054 1194 aa20.39■□□□□ 0.85
TPM1-205ENST00000357980 MBD4O95243 580 aa20.39■□□□□ 0.85
TPM1-205ENST00000357980 CYP21A2P08686 494 aa20.39■□□□□ 0.85
TPM1-205ENST00000357980 DPEP1P16444 411 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms