RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 RNMTO43148 476 aaKnown RBP13.37□□□□□ -0.27
COL9A1-202ENST00000357250 NOP2P46087 812 aaKnown RBP13.37□□□□□ -0.27
COL9A1-202ENST00000357250 SCLT1Q96NL6 688 aa13.37□□□□□ -0.27
COL9A1-202ENST00000357250 NAP1L4Q99733 375 aaKnown RBP13.37□□□□□ -0.27
COL9A1-202ENST00000357250 CCDC113Q9H0I3 377 aa13.37□□□□□ -0.27
COL9A1-202ENST00000357250 JADE2Q9NQC1 790 aa13.37□□□□□ -0.27
COL9A1-202ENST00000357250 ZFYVE16Q7Z3T8 1539 aa13.37□□□□□ -0.27
COL9A1-202ENST00000357250 KDM5CP41229 1560 aa13.37□□□□□ -0.27
COL9A1-202ENST00000357250 TACC1O75410 805 aa13.37□□□□□ -0.27
COL9A1-202ENST00000357250 AK2P54819 239 aa13.37□□□□□ -0.27
COL9A1-202ENST00000357250 DNM1Q05193 864 aaKnown RBP13.37□□□□□ -0.27
COL9A1-202ENST00000357250 UTP14AQ9BVJ6 771 aaKnown RBP13.37□□□□□ -0.27
COL9A1-202ENST00000357250 PANK2Q9BZ23 570 aa13.37□□□□□ -0.27
COL9A1-202ENST00000357250 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
COL9A1-202ENST00000357250 CHL1O00533 1208 aa13.36□□□□□ -0.27
COL9A1-202ENST00000357250 SLC4A8Q2Y0W8 1093 aa13.36□□□□□ -0.27
COL9A1-202ENST00000357250 LMBR1Q8WVP7 490 aa13.36□□□□□ -0.27
COL9A1-202ENST00000357250 SELENOOQ9BVL4 669 aa13.36□□□□□ -0.27
COL9A1-202ENST00000357250 LRRC2Q9BYS8 371 aa13.36□□□□□ -0.27
COL9A1-202ENST00000357250 CTNNA2P26232 953 aa13.36□□□□□ -0.27
COL9A1-202ENST00000357250 LLPHQ9BRT6 129 aaKnown RBP13.36□□□□□ -0.27
COL9A1-202ENST00000357250 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
COL9A1-202ENST00000357250 FSD2A1L4K1 749 aa13.36□□□□□ -0.27
COL9A1-202ENST00000357250 IL2RBP14784 551 aa13.36□□□□□ -0.27
COL9A1-202ENST00000357250 TTC12Q9H892 705 aaPredicted RBP13.36□□□□□ -0.27
COL9A1-202ENST00000357250 CDC42BPAQ5VT25 1732 aa13.36□□□□□ -0.27
COL9A1-202ENST00000357250 MYO1BO43795 1136 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 SLU7O95391 586 aaKnown RBP13.35□□□□□ -0.27
COL9A1-202ENST00000357250 STAMBPO95630 424 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 ZNF804AQ7Z570 1209 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 GOPCQ9HD26 462 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 RBM28Q9NW13 759 aaKnown RBP13.35□□□□□ -0.27
COL9A1-202ENST00000357250 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
COL9A1-202ENST00000357250 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 KRT86O43790 486 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 GNA11P29992 359 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 KIAA0753Q2KHM9 967 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 CTNNBL1Q8WYA6 563 aaPredicted RBP13.35□□□□□ -0.27
COL9A1-202ENST00000357250 ZMYM4Q5VZL5 1548 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 UBAP1LF5GYI3 381 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 HSF2BPO75031 334 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 ANKRD2Q9GZV1 360 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 VAT1LQ9HCJ6 419 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 BTG4Q9NY30 223 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 MAGEB6P1A0A0J9YX57 407 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 AOPEPQ8N6M6 819 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 PRR36Q9H6K5 1346 aa13.35□□□□□ -0.27
COL9A1-202ENST00000357250 KRT13P13646 458 aa13.34□□□□□ -0.27
COL9A1-202ENST00000357250 ACTN2P35609 894 aa13.34□□□□□ -0.27
COL9A1-202ENST00000357250 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.34□□□□□ -0.27
COL9A1-202ENST00000357250 HELBQ8NG08 1087 aaPredicted RBP13.34□□□□□ -0.27
COL9A1-202ENST00000357250 FERMT2Q96AC1 680 aa13.34□□□□□ -0.27
COL9A1-202ENST00000357250 PLCD4Q9BRC7 762 aa13.34□□□□□ -0.27
COL9A1-202ENST00000357250 DNAJC25Q9H1X3 360 aa13.34□□□□□ -0.27
COL9A1-202ENST00000357250 BLMP54132 1417 aaPredicted RBP13.34□□□□□ -0.27
COL9A1-202ENST00000357250 SYT1P21579 422 aa13.34□□□□□ -0.27
COL9A1-202ENST00000357250 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
COL9A1-202ENST00000357250 POLR3GO15318 223 aaPredicted RBP13.34□□□□□ -0.27
COL9A1-202ENST00000357250 CCDC155Q8N6L0 562 aa13.34□□□□□ -0.27
COL9A1-202ENST00000357250 ROBO2Q9HCK4 1378 aa13.34□□□□□ -0.27
COL9A1-202ENST00000357250 PTPDC1A2A3K4 754 aa13.33□□□□□ -0.27
COL9A1-202ENST00000357250 OPA1O60313 960 aa13.33□□□□□ -0.27
COL9A1-202ENST00000357250 KRT2P35908 639 aa13.33□□□□□ -0.27
COL9A1-202ENST00000357250 KRT79Q5XKE5 535 aa13.33□□□□□ -0.27
COL9A1-202ENST00000357250 IQUBQ8NA54 791 aa13.33□□□□□ -0.27
COL9A1-202ENST00000357250 GIMAP7Q8NHV1 300 aa13.33□□□□□ -0.27
COL9A1-202ENST00000357250 RASAL2Q9UJF2 1139 aa13.33□□□□□ -0.27
COL9A1-202ENST00000357250 USP19O94966 1318 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 IVLP07476 585 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 PNMA6EA0A0J9YXQ4 647 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 NAPAP54920 295 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 KIF5AQ12840 1032 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 CERS3Q8IU89 383 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 IL17REQ8NFR9 667 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 TMEM87BQ96K49 555 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 STMN4Q9H169 189 aaPredicted RBP13.33□□□□□ -0.28
COL9A1-202ENST00000357250 DNAI1Q9UI46 699 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 HDAC9Q9UKV0 1011 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 RNF123Q5XPI4 1314 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 CTAGE9A4FU28 777 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 ASIC1P78348 528 aa13.33□□□□□ -0.28
COL9A1-202ENST00000357250 PCDH11XQ9BZA7 1347 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 PCDH11YQ9BZA8 1340 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 AFMP43652 599 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 PRIM1P49642 420 aaKnown RBP13.32□□□□□ -0.28
COL9A1-202ENST00000357250 TPTE2Q6XPS3 522 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 RILPL1Q5EBL4 403 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 ZNF790Q6PG37 636 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 MAATS1Q7Z4T9 603 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 MLH3Q9UHC1 1453 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 ELP1O95163 1332 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 A1BGP04217 495 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 TUBB2AQ13885 445 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 GOLGA1Q92805 767 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 RRP36Q96EU6 259 aaKnown RBP13.32□□□□□ -0.28
COL9A1-202ENST00000357250 TUBB2BQ9BVA1 445 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 ATP6V1AP38606 617 aa13.32□□□□□ -0.28
COL9A1-202ENST00000357250 CNGA4Q8IV77 575 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms