RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 FBXO31Q5XUX0 539 aaPredicted RBP16.79■□□□□ 0.28
CHD4-201ENST00000357008 C10orf67Q8IYJ2 551 aa16.79■□□□□ 0.28
CHD4-201ENST00000357008 ZNF445P59923 1031 aa16.79■□□□□ 0.28
CHD4-201ENST00000357008 TUBB2AQ13885 445 aa16.79■□□□□ 0.28
CHD4-201ENST00000357008 TRMT1LQ7Z2T5 733 aaKnown RBP16.79■□□□□ 0.28
CHD4-201ENST00000357008 IQUBQ8NA54 791 aa16.79■□□□□ 0.28
CHD4-201ENST00000357008 TUBB2BQ9BVA1 445 aa16.79■□□□□ 0.28
CHD4-201ENST00000357008 PIK3C2GO75747 1445 aa16.79■□□□□ 0.28
CHD4-201ENST00000357008 TSGA10Q9BZW7 698 aa16.79■□□□□ 0.28
CHD4-201ENST00000357008 GNAT2P19087 354 aa16.79■□□□□ 0.28
CHD4-201ENST00000357008 IFT81Q8WYA0 676 aa16.79■□□□□ 0.28
CHD4-201ENST00000357008 EXOC5O00471 708 aa16.78■□□□□ 0.28
CHD4-201ENST00000357008 U2AF2P26368 475 aaKnown RBP eCLIP16.78■□□□□ 0.282e-8■□□□□ 10.4
CHD4-201ENST00000357008 NAPAP54920 295 aa16.78■□□□□ 0.28
CHD4-201ENST00000357008 ARID5AQ03989 594 aa16.78■□□□□ 0.28
CHD4-201ENST00000357008 BICD1Q96G01 975 aa16.78■□□□□ 0.28
CHD4-201ENST00000357008 C6orf50Q9HD87 102 aa16.78■□□□□ 0.28
CHD4-201ENST00000357008 ZBTB16Q05516 673 aa16.78■□□□□ 0.28
CHD4-201ENST00000357008 KRT79Q5XKE5 535 aa16.78■□□□□ 0.28
CHD4-201ENST00000357008 SMC6Q96SB8 1091 aa16.78■□□□□ 0.28
CHD4-201ENST00000357008 TSPYL6Q8N831 410 aa16.78■□□□□ 0.28
CHD4-201ENST00000357008 CCDC122Q5T0U0 273 aa16.77■□□□□ 0.28
CHD4-201ENST00000357008 MYRIPQ8NFW9 859 aa16.77■□□□□ 0.28
CHD4-201ENST00000357008 MTRF1LQ9UGC7 380 aaKnown RBP16.77■□□□□ 0.28
CHD4-201ENST00000357008 SLC4A8Q2Y0W8 1093 aa16.77■□□□□ 0.28
CHD4-201ENST00000357008 DNAJC21Q5F1R6 531 aaKnown RBP16.77■□□□□ 0.28
CHD4-201ENST00000357008 COMMD10Q9Y6G5 202 aa16.77■□□□□ 0.28
CHD4-201ENST00000357008 SAMD15Q9P1V8 674 aa16.77■□□□□ 0.28
CHD4-201ENST00000357008 RIOK3O14730 519 aaKnown RBP16.77■□□□□ 0.27
CHD4-201ENST00000357008 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.27
CHD4-201ENST00000357008 CHST3Q7LGC8 479 aa16.77■□□□□ 0.27
CHD4-201ENST00000357008 A0A1B0GVL5 298 aa16.77■□□□□ 0.27
CHD4-201ENST00000357008 NAA16Q6N069 864 aaPredicted RBP16.77■□□□□ 0.27
CHD4-201ENST00000357008 KRT28Q7Z3Y7 464 aa16.77■□□□□ 0.27
CHD4-201ENST00000357008 AKAP4Q5JQC9 854 aa16.76■□□□□ 0.27
CHD4-201ENST00000357008 PRAG1Q86YV5 1406 aa16.76■□□□□ 0.27
CHD4-201ENST00000357008 SYNCQ9H7C4 482 aa16.76■□□□□ 0.27
CHD4-201ENST00000357008 GABPB1Q06547 395 aaPredicted RBP16.76■□□□□ 0.27
CHD4-201ENST00000357008 MRVI1Q9Y6F6 885 aa16.76■□□□□ 0.27
CHD4-201ENST00000357008 ZBTB7BO15156 539 aaPredicted RBP16.76■□□□□ 0.27
CHD4-201ENST00000357008 EIF4A2Q14240 407 aaKnown RBP16.75■□□□□ 0.27
CHD4-201ENST00000357008 PUS7Q96PZ0 661 aaKnown RBP16.75■□□□□ 0.27
CHD4-201ENST00000357008 PPP1R9BQ96SB3 815 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 A0A1B0GUL7 405 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 TRIM14Q14142 442 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 KRBA2Q6ZNG9 492 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 GSTA5Q7RTV2 222 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 CLSTN2Q9H4D0 955 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 POLKQ9UBT6 870 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 TLDC2A0PJX2 215 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 CHMP4BP1P59074 171 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 DTHD1Q6ZMT9 781 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 B4GALNT4Q76KP1 1039 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 SERPINA10Q9UK55 444 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 AFAP1L1Q8TED9 768 aa16.75■□□□□ 0.27
CHD4-201ENST00000357008 NAPGQ99747 312 aaPredicted RBP16.75■□□□□ 0.27
CHD4-201ENST00000357008 TTF2Q9UNY4 1162 aaKnown RBP16.75■□□□□ 0.27
CHD4-201ENST00000357008 SBNO2Q9Y2G9 1366 aa16.74■□□□□ 0.27
CHD4-201ENST00000357008 PPP1R2P41236 205 aa16.74■□□□□ 0.27
CHD4-201ENST00000357008 GBP6Q6ZN66 633 aa16.74■□□□□ 0.27
CHD4-201ENST00000357008 RGS22Q8NE09 1264 aa16.74■□□□□ 0.27
CHD4-201ENST00000357008 ZNF75DP51815 510 aa16.74■□□□□ 0.27
CHD4-201ENST00000357008 SETDB1Q15047 1291 aa16.74■□□□□ 0.27
CHD4-201ENST00000357008 A6NNZ2 444 aa16.74■□□□□ 0.27
CHD4-201ENST00000357008 RPS6KB1P23443 525 aa16.74■□□□□ 0.27
CHD4-201ENST00000357008 TUBB8Q3ZCM7 444 aa16.74■□□□□ 0.27
CHD4-201ENST00000357008 IGSF22Q8N9C0 903 aa16.74■□□□□ 0.27
CHD4-201ENST00000357008 IMPACTQ9P2X3 320 aa16.73■□□□□ 0.27
CHD4-201ENST00000357008 MAGEB6P1A0A0J9YX57 407 aa16.73■□□□□ 0.27
CHD4-201ENST00000357008 FMNL3Q8IVF7 1028 aa16.73■□□□□ 0.27
CHD4-201ENST00000357008 RSRC1Q96IZ7 334 aaKnown RBP16.73■□□□□ 0.27
CHD4-201ENST00000357008 MCM7P33993 719 aa16.73■□□□□ 0.27
CHD4-201ENST00000357008 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
CHD4-201ENST00000357008 HS2ST1Q7LGA3 356 aa16.73■□□□□ 0.27
CHD4-201ENST00000357008 LLPHQ9BRT6 129 aaKnown RBP16.73■□□□□ 0.27
CHD4-201ENST00000357008 IRX3P78415 501 aaPredicted RBP16.73■□□□□ 0.27
CHD4-201ENST00000357008 HELLSQ9NRZ9 838 aa16.73■□□□□ 0.27
CHD4-201ENST00000357008 RILPL1Q5EBL4 403 aa16.73■□□□□ 0.27
CHD4-201ENST00000357008 CALCOCO2Q13137 446 aa16.72■□□□□ 0.27
CHD4-201ENST00000357008 STIM2Q9P246 746 aa16.72■□□□□ 0.27
CHD4-201ENST00000357008 MTUS1Q9ULD2 1270 aa16.72■□□□□ 0.27
CHD4-201ENST00000357008 GNA11P29992 359 aa16.72■□□□□ 0.27
CHD4-201ENST00000357008 WDR78Q5VTH9 848 aa16.72■□□□□ 0.27
CHD4-201ENST00000357008 KDM2BQ8NHM5 1336 aa16.72■□□□□ 0.27
CHD4-201ENST00000357008 SMIM23A6NLE4 172 aa16.72■□□□□ 0.27
CHD4-201ENST00000357008 DAAM2Q86T65 1068 aa16.72■□□□□ 0.27
CHD4-201ENST00000357008 CCDC26Q8TAB7 109 aa16.72■□□□□ 0.27
CHD4-201ENST00000357008 RRP36Q96EU6 259 aaKnown RBP16.72■□□□□ 0.27
CHD4-201ENST00000357008 CEP83Q9Y592 693 aa16.72■□□□□ 0.27
CHD4-201ENST00000357008 TMEM110-MUSTN1A8MSY1 372 aa16.72■□□□□ 0.27
CHD4-201ENST00000357008 EEF2P13639 858 aaKnown RBP16.71■□□□□ 0.27
CHD4-201ENST00000357008 CPA1P15085 419 aa16.71■□□□□ 0.27
CHD4-201ENST00000357008 PLCB3Q01970 1234 aa16.71■□□□□ 0.27
CHD4-201ENST00000357008 TFCP2Q12800 502 aa16.71■□□□□ 0.27
CHD4-201ENST00000357008 CBX8Q9HC52 389 aa16.71■□□□□ 0.27
CHD4-201ENST00000357008 ATP6V0A2Q9Y487 856 aa16.71■□□□□ 0.27
CHD4-201ENST00000357008 LACTBP83111 547 aaPredicted RBP16.71■□□□□ 0.27
CHD4-201ENST00000357008 WDHD1O75717 1129 aaPredicted RBP16.71■□□□□ 0.27
CHD4-201ENST00000357008 FANCCQ00597 558 aa16.71■□□□□ 0.27
CHD4-201ENST00000357008 JAKMIP2Q96AA8 810 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms