RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ZMYM1Q5SVZ6 1142 aa21.9■■□□□ 1.1
SMARCD3-202ENST00000356800 SEC62Q99442 399 aaKnown RBP21.9■■□□□ 1.1
SMARCD3-202ENST00000356800 DENND2AQ9ULE3 1009 aa21.9■■□□□ 1.1
SMARCD3-202ENST00000356800 DPP8Q6V1X1 898 aaPredicted RBP21.89■■□□□ 1.1
SMARCD3-202ENST00000356800 ZNF589Q86UQ0 364 aaPredicted RBP21.89■■□□□ 1.1
SMARCD3-202ENST00000356800 LSG1Q9H089 658 aaKnown RBP21.89■■□□□ 1.1
SMARCD3-202ENST00000356800 ZNF219Q9P2Y4 722 aaPredicted RBP21.89■■□□□ 1.1
SMARCD3-202ENST00000356800 CHD4Q14839 1912 aa21.89■■□□□ 1.09
SMARCD3-202ENST00000356800 PDS5AQ29RF7 1337 aaKnown RBP21.88■■□□□ 1.09
SMARCD3-202ENST00000356800 IDH1O75874 414 aaKnown RBP21.88■■□□□ 1.09
SMARCD3-202ENST00000356800 TGFB2P61812 414 aa21.88■■□□□ 1.09
SMARCD3-202ENST00000356800 ZNF804AQ7Z570 1209 aa21.88■■□□□ 1.09
SMARCD3-202ENST00000356800 TTLL6Q8N841 843 aa21.88■■□□□ 1.09
SMARCD3-202ENST00000356800 TDRD7Q8NHU6 1098 aaKnown RBP21.88■■□□□ 1.09
SMARCD3-202ENST00000356800 EPB41L2O43491 1005 aaKnown RBP21.87■■□□□ 1.09
SMARCD3-202ENST00000356800 ZFYP08048 801 aaPredicted RBP21.87■■□□□ 1.09
SMARCD3-202ENST00000356800 ADD2P35612 726 aa21.87■■□□□ 1.09
SMARCD3-202ENST00000356800 PTH1RQ03431 593 aa21.87■■□□□ 1.09
SMARCD3-202ENST00000356800 MCMDC2Q4G0Z9 681 aa21.87■■□□□ 1.09
SMARCD3-202ENST00000356800 TMX4Q9H1E5 349 aaPredicted RBP21.87■■□□□ 1.09
SMARCD3-202ENST00000356800 WWC3Q9ULE0 1092 aa21.87■■□□□ 1.09
SMARCD3-202ENST00000356800 CCDC129Q6ZRS4 1044 aa21.86■■□□□ 1.09
SMARCD3-202ENST00000356800 OSBP2Q969R2 916 aa21.86■■□□□ 1.09
SMARCD3-202ENST00000356800 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.86■■□□□ 1.09
SMARCD3-202ENST00000356800 CD209Q9NNX6 404 aa21.86■■□□□ 1.09
SMARCD3-202ENST00000356800 HELLSQ9NRZ9 838 aa21.86■■□□□ 1.09
SMARCD3-202ENST00000356800 MAST3O60307 1309 aa21.86■■□□□ 1.09
SMARCD3-202ENST00000356800 FRAT2O75474 233 aaPredicted RBP21.85■■□□□ 1.09
SMARCD3-202ENST00000356800 PDE6AP16499 860 aa21.85■■□□□ 1.09
SMARCD3-202ENST00000356800 LRRFIP1Q32MZ4 808 aaKnown RBP21.85■■□□□ 1.09
SMARCD3-202ENST00000356800 SLC9C2Q5TAH2 1124 aa21.85■■□□□ 1.09
SMARCD3-202ENST00000356800 KIF2CQ99661 725 aa21.85■■□□□ 1.09
SMARCD3-202ENST00000356800 TCRBV5S4A2TA0A5A2 114 aa21.85■■□□□ 1.09
SMARCD3-202ENST00000356800 M0R2C6 588 aa21.85■■□□□ 1.09
SMARCD3-202ENST00000356800 RIMBP2O15034 1052 aa21.85■■□□□ 1.09
SMARCD3-202ENST00000356800 C21orf2O43822 256 aa21.85■■□□□ 1.09
SMARCD3-202ENST00000356800 IL1R1P14778 569 aa21.85■■□□□ 1.09
SMARCD3-202ENST00000356800 WASHC4Q2M389 1173 aa21.85■■□□□ 1.09
SMARCD3-202ENST00000356800 CCDC171Q6TFL3 1326 aa21.84■■□□□ 1.09
SMARCD3-202ENST00000356800 CHAF1AQ13111 956 aaPredicted RBP21.84■■□□□ 1.09
SMARCD3-202ENST00000356800 ZSCAN25Q6NSZ9 544 aa21.84■■□□□ 1.09
SMARCD3-202ENST00000356800 KIAA1211Q6ZU35 1233 aa21.84■■□□□ 1.09
SMARCD3-202ENST00000356800 APPBP2Q92624 585 aa21.84■■□□□ 1.09
SMARCD3-202ENST00000356800 RTFDC1Q9BY42 306 aaPredicted RBP21.84■■□□□ 1.09
SMARCD3-202ENST00000356800 CD2APQ9Y5K6 639 aa21.84■■□□□ 1.09
SMARCD3-202ENST00000356800 MAP3K12Q12852 859 aa21.83■■□□□ 1.09
SMARCD3-202ENST00000356800 UBE3CQ15386 1083 aa21.83■■□□□ 1.09
SMARCD3-202ENST00000356800 CC2D2BQ6DHV5 1058 aa21.83■■□□□ 1.09
SMARCD3-202ENST00000356800 PPP1R1BQ9UD71 204 aaPredicted RBP21.83■■□□□ 1.09
SMARCD3-202ENST00000356800 ABCF2Q9UG63 623 aa21.83■■□□□ 1.09
SMARCD3-202ENST00000356800 JAG2Q9Y219 1238 aa21.83■■□□□ 1.09
SMARCD3-202ENST00000356800 ZNF532Q9HCE3 1301 aa21.83■■□□□ 1.08
SMARCD3-202ENST00000356800 PUS7LQ9H0K6 701 aaKnown RBP21.82■■□□□ 1.08
SMARCD3-202ENST00000356800 LRP2BPQ9P2M1 347 aa21.82■■□□□ 1.08
SMARCD3-202ENST00000356800 CCDC88AQ3V6T2 1871 aa21.82■■□□□ 1.08
SMARCD3-202ENST00000356800 MAGEB6Q8N7X4 407 aa21.82■■□□□ 1.08
SMARCD3-202ENST00000356800 ZC3H12CQ9C0D7 883 aaKnown RBP21.82■■□□□ 1.08
SMARCD3-202ENST00000356800 PIM2Q9P1W9 311 aa21.82■■□□□ 1.08
SMARCD3-202ENST00000356800 MAST2Q6P0Q8 1798 aa21.81■■□□□ 1.08
SMARCD3-202ENST00000356800 ZNF384Q8TF68 577 aa21.81■■□□□ 1.08
SMARCD3-202ENST00000356800 MAP4K1Q92918 833 aa21.81■■□□□ 1.08
SMARCD3-202ENST00000356800 COA1Q9GZY4 146 aa21.81■■□□□ 1.08
SMARCD3-202ENST00000356800 PALD1Q9ULE6 856 aa21.81■■□□□ 1.08
SMARCD3-202ENST00000356800 GOLGB1Q14789 3259 aaKnown RBP21.8■■□□□ 1.08
SMARCD3-202ENST00000356800 HSPA4P34932 840 aa21.8■■□□□ 1.08
SMARCD3-202ENST00000356800 KLHL34Q8N239 644 aa21.8■■□□□ 1.08
SMARCD3-202ENST00000356800 EYA3Q99504 573 aa21.8■■□□□ 1.08
SMARCD3-202ENST00000356800 SPON1Q9HCB6 807 aa21.8■■□□□ 1.08
SMARCD3-202ENST00000356800 SALL1Q9NSC2 1324 aa21.8■■□□□ 1.08
SMARCD3-202ENST00000356800 VPS53Q5VIR6 699 aa21.79■■□□□ 1.08
SMARCD3-202ENST00000356800 RAI14Q9P0K7 980 aa21.79■■□□□ 1.08
SMARCD3-202ENST00000356800 PRDX5P30044 214 aa21.79■■□□□ 1.08
SMARCD3-202ENST00000356800 DOK7Q18PE1 504 aa21.79■■□□□ 1.08
SMARCD3-202ENST00000356800 CCDC93Q567U6 631 aa21.79■■□□□ 1.08
SMARCD3-202ENST00000356800 WDR66Q8TBY9 1149 aa21.79■■□□□ 1.08
SMARCD3-202ENST00000356800 SCN9AQ15858 1988 aa21.78■■□□□ 1.08
SMARCD3-202ENST00000356800 RBM8AQ9Y5S9 174 aaKnown RBP21.78■■□□□ 1.08
SMARCD3-202ENST00000356800 ZNF646O15015 1829 aaPredicted RBP21.78■■□□□ 1.08
SMARCD3-202ENST00000356800 FOXP2O15409 715 aa21.77■■□□□ 1.08
SMARCD3-202ENST00000356800 GPAA1O43292 621 aa21.77■■□□□ 1.08
SMARCD3-202ENST00000356800 MCCP23508 829 aa21.77■■□□□ 1.08
SMARCD3-202ENST00000356800 NECTIN1Q15223 517 aa21.77■■□□□ 1.08
SMARCD3-202ENST00000356800 GRIK5Q16478 980 aa21.77■■□□□ 1.08
SMARCD3-202ENST00000356800 GRIPAP1Q4V328 841 aa21.77■■□□□ 1.08
SMARCD3-202ENST00000356800 DALRD3Q5D0E6 543 aaKnown RBP21.77■■□□□ 1.08
SMARCD3-202ENST00000356800 ERICH6Q7L0X2 663 aa21.77■■□□□ 1.08
SMARCD3-202ENST00000356800 ADGRA1Q86SQ6 560 aa21.77■■□□□ 1.08
SMARCD3-202ENST00000356800 FAM205AQ6ZU69 1335 aa21.77■■□□□ 1.08
SMARCD3-202ENST00000356800 FER1L6Q2WGJ9 1857 aa21.77■■□□□ 1.07
SMARCD3-202ENST00000356800 MECOMQ03112 1051 aa21.76■■□□□ 1.07
SMARCD3-202ENST00000356800 RTKN2Q8IZC4 609 aa21.76■■□□□ 1.07
SMARCD3-202ENST00000356800 NLGN2Q8NFZ4 835 aa21.76■■□□□ 1.07
SMARCD3-202ENST00000356800 NSUN4Q96CB9 384 aaKnown RBP21.76■■□□□ 1.07
SMARCD3-202ENST00000356800 IL17RAQ96F46 866 aa21.76■■□□□ 1.07
SMARCD3-202ENST00000356800 HSPD1P10809 573 aaKnown RBP21.75■■□□□ 1.07
SMARCD3-202ENST00000356800 CYP7A1P22680 504 aa21.75■■□□□ 1.07
SMARCD3-202ENST00000356800 RASEFQ8IZ41 740 aa21.75■■□□□ 1.07
SMARCD3-202ENST00000356800 DSCC1Q9BVC3 393 aa21.75■■□□□ 1.07
SMARCD3-202ENST00000356800 KIAA2012Q0VF49 1180 aa21.75■■□□□ 1.07
SMARCD3-202ENST00000356800 BECN1Q14457 450 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms