RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 STMN2Q93045 179 aa19.43■□□□□ 0.7
COL27A1-201ENST00000356083 STMN4Q9H169 189 aaPredicted RBP19.42■□□□□ 0.7
COL27A1-201ENST00000356083 ANXA1P04083 346 aa19.42■□□□□ 0.7
COL27A1-201ENST00000356083 EVI5LQ96CN4 794 aa19.42■□□□□ 0.7
COL27A1-201ENST00000356083 UBXN1Q04323 297 aa19.42■□□□□ 0.7
COL27A1-201ENST00000356083 SPATA17Q96L03 361 aa19.42■□□□□ 0.7
COL27A1-201ENST00000356083 VIMP08670 466 aaKnown RBP19.42■□□□□ 0.7
COL27A1-201ENST00000356083 AMOTQ4VCS5 1084 aa19.42■□□□□ 0.7
COL27A1-201ENST00000356083 NIP7Q9Y221 180 aaKnown RBP eCLIP19.42■□□□□ 0.7
COL27A1-201ENST00000356083 PPFIA1Q13136 1202 aa19.42■□□□□ 0.7
COL27A1-201ENST00000356083 RNF169Q8NCN4 708 aa19.42■□□□□ 0.7
COL27A1-201ENST00000356083 GTF2A1P52655 376 aaPredicted RBP19.42■□□□□ 0.7
COL27A1-201ENST00000356083 FAM47CQ5HY64 1035 aa19.42■□□□□ 0.7
COL27A1-201ENST00000356083 WDR44Q5JSH3 913 aa19.41■□□□□ 0.7
COL27A1-201ENST00000356083 RRP36Q96EU6 259 aaKnown RBP19.41■□□□□ 0.7
COL27A1-201ENST00000356083 SFMBT1Q9UHJ3 866 aa19.41■□□□□ 0.7
COL27A1-201ENST00000356083 MYCLP12524 364 aaPredicted RBP19.41■□□□□ 0.7
COL27A1-201ENST00000356083 IVNS1ABPQ9Y6Y0 642 aa19.41■□□□□ 0.7
COL27A1-201ENST00000356083 RIOK1Q9BRS2 568 aaKnown RBP19.41■□□□□ 0.7
COL27A1-201ENST00000356083 PLCB4Q15147 1175 aa19.41■□□□□ 0.7
COL27A1-201ENST00000356083 GKAP1Q5VSY0 366 aaPredicted RBP19.41■□□□□ 0.7
COL27A1-201ENST00000356083 PSMA7O14818 248 aa19.41■□□□□ 0.7
COL27A1-201ENST00000356083 TRPC3Q13507 836 aa19.41■□□□□ 0.7
COL27A1-201ENST00000356083 NBPF8Q3BBV2 869 aa19.41■□□□□ 0.7
COL27A1-201ENST00000356083 NBPF14Q5TI25 921 aa19.41■□□□□ 0.7
COL27A1-201ENST00000356083 ZNF804AQ7Z570 1209 aa19.41■□□□□ 0.7
COL27A1-201ENST00000356083 ZSCAN30Q86W11 494 aa19.41■□□□□ 0.7
COL27A1-201ENST00000356083 ARFGAP3Q9NP61 516 aa19.41■□□□□ 0.7
COL27A1-201ENST00000356083 ANKRD30BQ9BXX2 1392 aa19.41■□□□□ 0.7
COL27A1-201ENST00000356083 ALDH3A1P30838 453 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 STX17P56962 302 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 CCDC125Q86Z20 511 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 TMOD4Q9NZQ9 345 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 MYCP01106 439 aaPredicted RBP19.4■□□□□ 0.7
COL27A1-201ENST00000356083 PRR16Q569H4 304 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 BSPRYQ5W0U4 402 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 CCDC121Q6ZUS5 278 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 MIGA1Q8NAN2 632 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 RPAP2Q8IXW5 612 aaPredicted RBP19.4■□□□□ 0.7
COL27A1-201ENST00000356083 NSMCE1Q8WV22 266 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 MCM9Q9NXL9 1143 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 FCHSD1Q86WN1 690 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 ESR2Q92731 530 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 EIF6P56537 245 aaKnown RBP19.4■□□□□ 0.7
COL27A1-201ENST00000356083 JAKMIP2Q96AA8 810 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 GUCA1BQ9UMX6 200 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 CNGA1P29973 690 aa19.4■□□□□ 0.7
COL27A1-201ENST00000356083 TACC1O75410 805 aa19.39■□□□□ 0.7
COL27A1-201ENST00000356083 TCEANC2Q96MN5 208 aa19.39■□□□□ 0.7
COL27A1-201ENST00000356083 MAGEB6P1A0A0J9YX57 407 aa19.39■□□□□ 0.69
COL27A1-201ENST00000356083 MYOM3Q5VTT5 1437 aa19.39■□□□□ 0.69
COL27A1-201ENST00000356083 TXNDC9O14530 226 aa19.39■□□□□ 0.69
COL27A1-201ENST00000356083 SSFA2P28290 1259 aa19.39■□□□□ 0.69
COL27A1-201ENST00000356083 CLUL1Q15846 466 aa19.39■□□□□ 0.69
COL27A1-201ENST00000356083 KRT28Q7Z3Y7 464 aa19.39■□□□□ 0.69
COL27A1-201ENST00000356083 KRT19P08727 400 aa19.39■□□□□ 0.69
COL27A1-201ENST00000356083 KARSQ15046 597 aaKnown RBP19.39■□□□□ 0.69
COL27A1-201ENST00000356083 BRDTQ58F21 947 aaPredicted RBP19.39■□□□□ 0.69
COL27A1-201ENST00000356083 GPCPD1Q9NPB8 672 aa19.39■□□□□ 0.69
COL27A1-201ENST00000356083 TTC14Q96N46 770 aa19.38■□□□□ 0.69
COL27A1-201ENST00000356083 DNAI1Q9UI46 699 aa19.38■□□□□ 0.69
COL27A1-201ENST00000356083 PTPDC1A2A3K4 754 aa19.38■□□□□ 0.69
COL27A1-201ENST00000356083 FAM114A2Q9NRY5 505 aa19.38■□□□□ 0.69
COL27A1-201ENST00000356083 BZW2Q9Y6E2 419 aaKnown RBP19.38■□□□□ 0.69
COL27A1-201ENST00000356083 CCDC61Q9Y6R9 512 aa19.38■□□□□ 0.69
COL27A1-201ENST00000356083 ZFYP08048 801 aaPredicted RBP19.38■□□□□ 0.69
COL27A1-201ENST00000356083 KRT23Q9C075 422 aa19.38■□□□□ 0.69
COL27A1-201ENST00000356083 SCAPERQ9BY12 1400 aa19.38■□□□□ 0.69
COL27A1-201ENST00000356083 CIB2O75838 187 aa19.38■□□□□ 0.69
COL27A1-201ENST00000356083 MAGEB6Q8N7X4 407 aa19.38■□□□□ 0.69
COL27A1-201ENST00000356083 DBF4Q9UBU7 674 aaPredicted RBP19.38■□□□□ 0.69
COL27A1-201ENST00000356083 USTQ9Y2C2 406 aa19.38■□□□□ 0.69
COL27A1-201ENST00000356083 LMBR1Q8WVP7 490 aa19.38■□□□□ 0.69
COL27A1-201ENST00000356083 PPP1R12CQ9BZL4 782 aa19.38■□□□□ 0.69
COL27A1-201ENST00000356083 ARHGEF2Q92974 986 aaKnown RBP19.38■□□□□ 0.69
COL27A1-201ENST00000356083 RXRAP19793 462 aa19.37■□□□□ 0.69
COL27A1-201ENST00000356083 ERBINQ96RT1 1412 aa19.37■□□□□ 0.69
COL27A1-201ENST00000356083 INTS8Q75QN2 995 aaKnown RBP19.37■□□□□ 0.69
COL27A1-201ENST00000356083 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.37■□□□□ 0.69
COL27A1-201ENST00000356083 RHOXF2BP0C7M4 288 aa19.37■□□□□ 0.69
COL27A1-201ENST00000356083 CCDC122Q5T0U0 273 aa19.37■□□□□ 0.69
COL27A1-201ENST00000356083 RHOXF2Q9BQY4 288 aa19.37■□□□□ 0.69
COL27A1-201ENST00000356083 ZNF131P52739 623 aa19.37■□□□□ 0.69
COL27A1-201ENST00000356083 TRAF1Q13077 416 aa19.37■□□□□ 0.69
COL27A1-201ENST00000356083 ESYT2A0FGR8 921 aa19.37■□□□□ 0.69
COL27A1-201ENST00000356083 STK10O94804 968 aaKnown RBP19.37■□□□□ 0.69
COL27A1-201ENST00000356083 ANO6Q4KMQ2 910 aa19.37■□□□□ 0.69
COL27A1-201ENST00000356083 CTAGE15A4D2H0 777 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 SPDYE2BA6NHP3 402 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 CTAGE8P0CG41 777 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 SPDYE6P0CI01 402 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 RPS6KA2Q15349 733 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 ERCC6LQ2NKX8 1250 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 CTAGE6Q86UF2 777 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 CTAGE4Q8IX94 777 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 PARD3BQ8TEW8 1205 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 LZTFL1Q9NQ48 299 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 SPOPO43791 374 aa19.36■□□□□ 0.69
COL27A1-201ENST00000356083 FOXD4Q12950 439 aaPredicted RBP19.36■□□□□ 0.69
COL27A1-201ENST00000356083 DCLK2Q8N568 766 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms