RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 MB21D2Q8IYB1 491 aaPredicted RBP25.59■■□□□ 1.69
LIMS2-202ENST00000355119 NCOA5Q9HCD5 579 aaKnown RBP25.59■■□□□ 1.69
LIMS2-202ENST00000355119 TBC1D2BQ9UPU7 963 aa25.59■■□□□ 1.69
LIMS2-202ENST00000355119 HAND2P61296 217 aa25.58■■□□□ 1.69
LIMS2-202ENST00000355119 RBM43Q6ZSC3 357 aaKnown RBP25.58■■□□□ 1.69
LIMS2-202ENST00000355119 NCOA7Q8NI08 942 aa25.58■■□□□ 1.69
LIMS2-202ENST00000355119 ZNF396Q96N95 335 aaPredicted RBP25.58■■□□□ 1.69
LIMS2-202ENST00000355119 AKAP11Q9UKA4 1901 aa25.58■■□□□ 1.69
LIMS2-202ENST00000355119 MROH5Q6ZUA9 1318 aa25.58■■□□□ 1.69
LIMS2-202ENST00000355119 ZNF213O14771 459 aa25.58■■□□□ 1.68
LIMS2-202ENST00000355119 PRC1O43663 620 aa25.58■■□□□ 1.68
LIMS2-202ENST00000355119 TYRO3Q06418 890 aa25.58■■□□□ 1.68
LIMS2-202ENST00000355119 UBN2Q6ZU65 1347 aa25.57■■□□□ 1.68
LIMS2-202ENST00000355119 ARID4AP29374 1257 aaPredicted RBP25.57■■□□□ 1.68
LIMS2-202ENST00000355119 ADD1P35611 737 aaKnown RBP25.57■■□□□ 1.68
LIMS2-202ENST00000355119 RALYLQ86SE5 291 aaKnown RBP25.57■■□□□ 1.68
LIMS2-202ENST00000355119 FAM200AQ8TCP9 573 aa25.57■■□□□ 1.68
LIMS2-202ENST00000355119 RCOR1Q9UKL0 485 aa25.57■■□□□ 1.68
LIMS2-202ENST00000355119 UBE3CQ15386 1083 aa25.56■■□□□ 1.68
LIMS2-202ENST00000355119 PUM3Q15397 648 aaKnown RBP25.56■■□□□ 1.68
LIMS2-202ENST00000355119 CAMK4Q16566 473 aa25.56■■□□□ 1.68
LIMS2-202ENST00000355119 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.56■■□□□ 1.68
LIMS2-202ENST00000355119 DHX16O60231 1041 aaKnown RBP25.56■■□□□ 1.68
LIMS2-202ENST00000355119 MRVI1Q9Y6F6 885 aa25.56■■□□□ 1.68
LIMS2-202ENST00000355119 CARMIL3Q8ND23 1372 aa25.55■■□□□ 1.68
LIMS2-202ENST00000355119 EIF5P55010 431 aaKnown RBP25.55■■□□□ 1.68
LIMS2-202ENST00000355119 SLC9C2Q5TAH2 1124 aa25.55■■□□□ 1.68
LIMS2-202ENST00000355119 LPIN2Q92539 896 aa25.55■■□□□ 1.68
LIMS2-202ENST00000355119 ARAP2Q8WZ64 1704 aa25.55■■□□□ 1.68
LIMS2-202ENST00000355119 TPM2P07951 284 aa25.54■■□□□ 1.68
LIMS2-202ENST00000355119 FOSBP53539 338 aa25.54■■□□□ 1.68
LIMS2-202ENST00000355119 CCDC102BQ68D86 513 aa25.54■■□□□ 1.68
LIMS2-202ENST00000355119 PIH1D3Q9NQM4 214 aaKnown RBP25.54■■□□□ 1.68
LIMS2-202ENST00000355119 DDX60Q8IY21 1712 aaKnown RBP25.54■■□□□ 1.68
LIMS2-202ENST00000355119 CCDC87Q9NVE4 849 aa25.54■■□□□ 1.68
LIMS2-202ENST00000355119 NR1I2O75469 434 aa25.53■■□□□ 1.68
LIMS2-202ENST00000355119 FGFR2P21802 821 aa25.53■■□□□ 1.68
LIMS2-202ENST00000355119 TERF1P54274 439 aa25.53■■□□□ 1.68
LIMS2-202ENST00000355119 THRAP3Q9Y2W1 955 aaKnown RBP25.53■■□□□ 1.68
LIMS2-202ENST00000355119 KLF18A0A0U1RQI7 1052 aa25.53■■□□□ 1.68
LIMS2-202ENST00000355119 PHKA1P46020 1223 aa25.53■■□□□ 1.68
LIMS2-202ENST00000355119 KIAA2012Q0VF49 1180 aa25.53■■□□□ 1.68
LIMS2-202ENST00000355119 ANTXR2P58335 489 aa25.52■■□□□ 1.68
LIMS2-202ENST00000355119 INTS5Q6P9B9 1019 aaKnown RBP25.52■■□□□ 1.68
LIMS2-202ENST00000355119 CKAP2LQ8IYA6 745 aa25.52■■□□□ 1.68
LIMS2-202ENST00000355119 GPHNQ9NQX3 736 aaPredicted RBP25.52■■□□□ 1.68
LIMS2-202ENST00000355119 GOLGA8BA8MQT2 603 aa25.51■■□□□ 1.67
LIMS2-202ENST00000355119 IDH1O75874 414 aaKnown RBP25.51■■□□□ 1.67
LIMS2-202ENST00000355119 SLC5A1P13866 664 aa25.51■■□□□ 1.67
LIMS2-202ENST00000355119 FDPSP14324 419 aaKnown RBP25.51■■□□□ 1.67
LIMS2-202ENST00000355119 TRDNQ13061 729 aa25.51■■□□□ 1.67
LIMS2-202ENST00000355119 PDE6AP16499 860 aa25.51■■□□□ 1.67
LIMS2-202ENST00000355119 SASS6Q6UVJ0 657 aa25.51■■□□□ 1.67
LIMS2-202ENST00000355119 UTP14AQ9BVJ6 771 aaKnown RBP25.51■■□□□ 1.67
LIMS2-202ENST00000355119 SLIT2O94813 1529 aa25.5■■□□□ 1.67
LIMS2-202ENST00000355119 SPATA31A1Q5TZJ5 1347 aa25.5■■□□□ 1.67
LIMS2-202ENST00000355119 ZNF532Q9HCE3 1301 aa25.5■■□□□ 1.67
LIMS2-202ENST00000355119 DDB1Q16531 1140 aa25.5■■□□□ 1.67
LIMS2-202ENST00000355119 PARP10Q53GL7 1025 aa25.5■■□□□ 1.67
LIMS2-202ENST00000355119 SUSD4Q5VX71 490 aa25.5■■□□□ 1.67
LIMS2-202ENST00000355119 RREB1Q92766 1687 aa25.5■■□□□ 1.67
LIMS2-202ENST00000355119 CTAGE5O15320 804 aa25.49■■□□□ 1.67
LIMS2-202ENST00000355119 TPM3P06753 285 aa25.49■■□□□ 1.67
LIMS2-202ENST00000355119 CEBPZQ03701 1054 aaKnown RBP25.49■■□□□ 1.67
LIMS2-202ENST00000355119 USP28Q96RU2 1077 aa25.49■■□□□ 1.67
LIMS2-202ENST00000355119 HPS5Q9UPZ3 1129 aa25.49■■□□□ 1.67
LIMS2-202ENST00000355119 CAVIN2O95810 425 aa25.49■■□□□ 1.67
LIMS2-202ENST00000355119 PLCB2Q00722 1185 aa25.49■■□□□ 1.67
LIMS2-202ENST00000355119 ANO6Q4KMQ2 910 aa25.49■■□□□ 1.67
LIMS2-202ENST00000355119 RGS22Q8NE09 1264 aa25.49■■□□□ 1.67
LIMS2-202ENST00000355119 NRAPQ86VF7 1730 aa25.48■■□□□ 1.67
LIMS2-202ENST00000355119 KAT6BQ8WYB5 2073 aa25.48■■□□□ 1.67
LIMS2-202ENST00000355119 GUCY1B3Q02153 619 aa25.48■■□□□ 1.67
LIMS2-202ENST00000355119 CCAR1Q8IX12 1150 aaKnown RBP25.48■■□□□ 1.67
LIMS2-202ENST00000355119 TCRBV5S4A2TA0A5A2 114 aa25.47■■□□□ 1.67
LIMS2-202ENST00000355119 AP5Z1O43299 807 aa25.47■■□□□ 1.67
LIMS2-202ENST00000355119 ATP6V1AP38606 617 aa25.47■■□□□ 1.67
LIMS2-202ENST00000355119 CRKLP46109 303 aaKnown RBP25.47■■□□□ 1.67
LIMS2-202ENST00000355119 ALX1Q15699 326 aa25.47■■□□□ 1.67
LIMS2-202ENST00000355119 C8orf76Q96K31 380 aa25.47■■□□□ 1.67
LIMS2-202ENST00000355119 CICQ96RK0 1608 aaPredicted RBP25.47■■□□□ 1.67
LIMS2-202ENST00000355119 CCDC73Q6ZRK6 1079 aa25.47■■□□□ 1.67
LIMS2-202ENST00000355119 ILDR1Q86SU0 546 aaPredicted RBP25.47■■□□□ 1.67
LIMS2-202ENST00000355119 MPHOSPH8Q99549 860 aa25.47■■□□□ 1.67
LIMS2-202ENST00000355119 NBPF3Q9H094 633 aa25.47■■□□□ 1.67
LIMS2-202ENST00000355119 CBX8Q9HC52 389 aa25.47■■□□□ 1.67
LIMS2-202ENST00000355119 ORC3Q9UBD5 711 aaPredicted RBP25.47■■□□□ 1.67
LIMS2-202ENST00000355119 WWC3Q9ULE0 1092 aa25.47■■□□□ 1.67
LIMS2-202ENST00000355119 ZMYM6O95789 1325 aa25.46■■□□□ 1.67
LIMS2-202ENST00000355119 CPLX1O14810 134 aa25.46■■□□□ 1.67
LIMS2-202ENST00000355119 APPP05067 770 aa25.46■■□□□ 1.67
LIMS2-202ENST00000355119 SPATA5Q8NB90 893 aa25.46■■□□□ 1.67
LIMS2-202ENST00000355119 HELBQ8NG08 1087 aaPredicted RBP25.46■■□□□ 1.67
LIMS2-202ENST00000355119 RTL9Q8NET4 1388 aa25.46■■□□□ 1.67
LIMS2-202ENST00000355119 GOLGA6L6A8MZA4 724 aa25.46■■□□□ 1.67
LIMS2-202ENST00000355119 RTEL1Q9NZ71 1219 aa25.46■■□□□ 1.67
LIMS2-202ENST00000355119 LOC102724428A0A0B4J2F2 783 aa25.45■■□□□ 1.66
LIMS2-202ENST00000355119 CAMTA2O94983 1202 aa25.45■■□□□ 1.66
LIMS2-202ENST00000355119 SIK1P57059 783 aa25.45■■□□□ 1.66
LIMS2-202ENST00000355119 CCDC152Q4G0S7 254 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms